EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000015400 (Gene tree)
Gene ID: -
Gene Symbol: zgc:152968
Alias: -
Full Name: RNA exonuclease 1 homolog
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 9641 bases
Position: chrKL652618.1:415408-425048
Accession: 107085190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012920	RNase_T	PF00929.24	3.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000030531	-	2670	XM_015375393	ENSCVAP00000012920	889 (aa)	XP_015230879	-

Gene Model

Click here to download ENSCVAG00000015400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015400	zgc:152968	87	63.130	ENSAPOG00000005095	zgc:152968	99	63.130	Acanthochromis_polyacanthus
ENSCVAG00000015400	zgc:152968	100	57.380	ENSACIG00000002527	zgc:152968	99	57.380	Amphilophus_citrinellus
ENSCVAG00000015400	zgc:152968	100	76.528	ENSAOCG00000018049	-	93	72.637	Amphiprion_ocellaris
ENSCVAG00000015400	zgc:152968	94	77.667	ENSAPEG00000012559	zgc:152968	83	77.667	Amphiprion_percula
ENSCVAG00000015400	zgc:152968	99	79.404	ENSACLG00000020524	-	79	79.404	Astatotilapia_calliptera
ENSCVAG00000015400	zgc:152968	72	66.667	ENSDARG00000037002	zgc:152968	55	66.667	Danio_rerio
ENSCVAG00000015400	zgc:152968	74	68.448	ENSELUG00000014272	zgc:152968	64	68.448	Esox_lucius
ENSCVAG00000015400	zgc:152968	100	84.521	ENSFHEG00000003641	-	81	84.521	Fundulus_heteroclitus
ENSCVAG00000015400	zgc:152968	99	86.139	ENSGAFG00000016810	-	82	87.940	Gambusia_affinis
ENSCVAG00000015400	zgc:152968	96	77.045	ENSHBUG00000007524	-	77	77.045	Haplochromis_burtoni
ENSCVAG00000015400	zgc:152968	82	53.415	ENSIPUG00000004633	zgc:152968	89	53.415	Ictalurus_punctatus
ENSCVAG00000015400	zgc:152968	93	73.956	ENSLBEG00000026485	zgc:152968	90	73.956	Labrus_bergylta
ENSCVAG00000015400	zgc:152968	100	68.750	ENSMAMG00000005920	-	88	68.750	Mastacembelus_armatus
ENSCVAG00000015400	zgc:152968	99	79.156	ENSMZEG00005013783	-	79	79.156	Maylandia_zebra
ENSCVAG00000015400	zgc:152968	92	75.743	ENSMMOG00000018072	zgc:152968	87	78.608	Mola_mola
ENSCVAG00000015400	zgc:152968	93	73.000	ENSMALG00000003536	-	89	73.000	Monopterus_albus
ENSCVAG00000015400	zgc:152968	100	77.667	ENSONIG00000016897	-	82	77.667	Oreochromis_niloticus
ENSCVAG00000015400	zgc:152968	83	75.434	ENSORLG00020012504	-	77	75.434	Oryzias_latipes_hni
ENSCVAG00000015400	zgc:152968	82	78.811	ENSOMEG00000008840	-	90	78.811	Oryzias_melastigma
ENSCVAG00000015400	zgc:152968	99	87.129	ENSPFOG00000006104	-	85	87.129	Poecilia_formosa
ENSCVAG00000015400	zgc:152968	100	87.129	ENSPLAG00000005034	-	81	87.129	Poecilia_latipinna
ENSCVAG00000015400	zgc:152968	99	87.376	ENSPMEG00000018012	-	80	87.376	Poecilia_mexicana
ENSCVAG00000015400	zgc:152968	100	86.881	ENSPREG00000007481	-	84	86.881	Poecilia_reticulata
ENSCVAG00000015400	zgc:152968	99	76.980	ENSSMAG00000008149	-	80	76.980	Scophthalmus_maximus
ENSCVAG00000015400	zgc:152968	100	78.960	ENSSDUG00000022323	-	87	80.402	Seriola_dumerili
ENSCVAG00000015400	zgc:152968	93	80.402	ENSSLDG00000018799	zgc:152968	86	80.402	Seriola_lalandi_dorsalis
ENSCVAG00000015400	zgc:152968	95	76.559	ENSSPAG00000007632	-	86	76.559	Stegastes_partitus
ENSCVAG00000015400	zgc:152968	100	73.515	ENSTRUG00000025441	zgc:152968	82	73.515	Takifugu_rubripes
ENSCVAG00000015400	zgc:152968	99	86.173	ENSXMAG00000026483	-	79	86.173	Xiphophorus_maculatus