EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000015417 (Gene tree)
Gene ID: 107095415
Gene Symbol: gtpbp6
Alias: fc56b07|wu:fc56b07|wu:fl82e09
Full Name: GTP binding protein 6 (putative)
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8543 bases
Position: chrKL653044.1:226178-234720
Accession: 107095415
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012940	MMR_HSR1	PF01926.23	2.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000020327	-	2343	XM_015391503	ENSCVAP00000012940	512 (aa)	XP_015246989	UPI0007428F30

Gene Model

Click here to download ENSCVAG00000015417's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015417's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015417	gtpbp6	83	63.700	ENSG00000178605	GTPBP6	83	63.700	Homo_sapiens
ENSCVAG00000015417	gtpbp6	100	77.757	ENSAPOG00000001396	gtpbp6	100	77.196	Acanthochromis_polyacanthus
ENSCVAG00000015417	gtpbp6	82	61.848	ENSAMEG00000001958	GTPBP6	89	61.848	Ailuropoda_melanoleuca
ENSCVAG00000015417	gtpbp6	98	74.570	ENSACIG00000001694	gtpbp6	98	74.570	Amphilophus_citrinellus
ENSCVAG00000015417	gtpbp6	98	81.139	ENSAOCG00000014817	gtpbp6	95	80.747	Amphiprion_ocellaris
ENSCVAG00000015417	gtpbp6	98	81.139	ENSAPEG00000017894	gtpbp6	95	80.747	Amphiprion_percula
ENSCVAG00000015417	gtpbp6	99	78.154	ENSATEG00000012768	gtpbp6	100	78.154	Anabas_testudineus
ENSCVAG00000015417	gtpbp6	79	67.662	ENSAPLG00000005592	GTPBP6	98	67.662	Anas_platyrhynchos
ENSCVAG00000015417	gtpbp6	85	67.512	ENSACAG00000011834	GTPBP6	94	62.450	Anolis_carolinensis
ENSCVAG00000015417	gtpbp6	100	77.486	ENSACLG00000002216	gtpbp6	99	77.068	Astatotilapia_calliptera
ENSCVAG00000015417	gtpbp6	93	75.208	ENSAMXG00000012493	gtpbp6	97	75.000	Astyanax_mexicanus
ENSCVAG00000015417	gtpbp6	83	60.890	ENSBTAG00000054315	GTPBP6	85	59.016	Bos_taurus
ENSCVAG00000015417	gtpbp6	69	63.842	ENSCJAG00000013056	GTPBP6	100	63.842	Callithrix_jacchus
ENSCVAG00000015417	gtpbp6	82	61.848	ENSCAFG00000010931	GTPBP6	80	61.848	Canis_familiaris
ENSCVAG00000015417	gtpbp6	82	61.611	ENSCAFG00020010766	-	80	61.611	Canis_lupus_dingo
ENSCVAG00000015417	gtpbp6	82	61.611	ENSCAFG00020001279	-	80	61.611	Canis_lupus_dingo
ENSCVAG00000015417	gtpbp6	83	61.124	ENSCHIG00000000121	GTPBP6	82	61.124	Capra_hircus
ENSCVAG00000015417	gtpbp6	83	63.466	ENSCCAG00000032874	GTPBP6	84	62.727	Cebus_capucinus
ENSCVAG00000015417	gtpbp6	83	64.637	ENSCATG00000024945	GTPBP6	84	63.864	Cercocebus_atys
ENSCVAG00000015417	gtpbp6	59	66.284	ENSCLAG00000000054	-	100	66.284	Chinchilla_lanigera
ENSCVAG00000015417	gtpbp6	51	67.954	ENSCSAG00000018371	-	99	67.954	Chlorocebus_sabaeus
ENSCVAG00000015417	gtpbp6	83	68.545	ENSCPBG00000007520	GTPBP6	84	67.426	Chrysemys_picta_bellii
ENSCVAG00000015417	gtpbp6	81	39.671	ENSCING00000012867	-	81	39.953	Ciona_intestinalis
ENSCVAG00000015417	gtpbp6	74	36.408	ENSCSAVG00000009232	-	95	36.408	Ciona_savignyi
ENSCVAG00000015417	gtpbp6	82	58.353	ENSCGRG00001022411	Gtpbp6	84	57.907	Cricetulus_griseus_chok1gshd
ENSCVAG00000015417	gtpbp6	80	58.354	ENSCGRG00000007715	Gtpbp6	95	58.354	Cricetulus_griseus_crigri
ENSCVAG00000015417	gtpbp6	92	70.798	ENSCSEG00000007271	gtpbp6	93	70.378	Cynoglossus_semilaevis
ENSCVAG00000015417	gtpbp6	94	71.933	ENSDARG00000061091	gtpbp6	88	71.933	Danio_rerio
ENSCVAG00000015417	gtpbp6	65	52.994	ENSDNOG00000039508	GTPBP6	79	51.852	Dasypus_novemcinctus
ENSCVAG00000015417	gtpbp6	82	38.851	FBgn0039339	CG5116	81	38.851	Drosophila_melanogaster
ENSCVAG00000015417	gtpbp6	82	51.422	ENSEBUG00000000404	gtpbp6	76	51.422	Eptatretus_burgeri
ENSCVAG00000015417	gtpbp6	75	62.435	ENSEASG00005007092	-	51	61.347	Equus_asinus_asinus
ENSCVAG00000015417	gtpbp6	84	61.916	ENSECAG00000032734	GTPBP6	83	61.048	Equus_caballus
ENSCVAG00000015417	gtpbp6	82	79.524	ENSELUG00000016376	gtpbp6	76	79.481	Esox_lucius
ENSCVAG00000015417	gtpbp6	83	55.294	ENSFCAG00000010310	-	97	59.671	Felis_catus
ENSCVAG00000015417	gtpbp6	83	55.841	ENSFCAG00000013263	-	84	54.649	Felis_catus
ENSCVAG00000015417	gtpbp6	84	66.589	ENSFALG00000004133	GTPBP6	92	65.604	Ficedula_albicollis
ENSCVAG00000015417	gtpbp6	99	86.873	ENSFHEG00000012018	gtpbp6	99	86.873	Fundulus_heteroclitus
ENSCVAG00000015417	gtpbp6	79	80.645	ENSGMOG00000004778	gtpbp6	99	80.645	Gadus_morhua
ENSCVAG00000015417	gtpbp6	77	67.342	ENSGALG00000016717	GTPBP6	98	67.342	Gallus_gallus
ENSCVAG00000015417	gtpbp6	100	83.654	ENSGAFG00000018158	gtpbp6	90	84.615	Gambusia_affinis
ENSCVAG00000015417	gtpbp6	79	83.210	ENSGACG00000013857	gtpbp6	99	83.210	Gasterosteus_aculeatus
ENSCVAG00000015417	gtpbp6	81	69.712	ENSGAGG00000021606	GTPBP6	92	62.729	Gopherus_agassizii
ENSCVAG00000015417	gtpbp6	56	65.157	ENSGGOG00000002792	-	100	65.157	Gorilla_gorilla
ENSCVAG00000015417	gtpbp6	100	78.049	ENSHBUG00000013113	gtpbp6	99	77.632	Haplochromis_burtoni
ENSCVAG00000015417	gtpbp6	83	60.706	ENSHGLG00000000207	GTPBP6	85	59.773	Heterocephalus_glaber_female
ENSCVAG00000015417	gtpbp6	70	59.889	ENSHGLG00100000320	GTPBP6	100	59.889	Heterocephalus_glaber_male
ENSCVAG00000015417	gtpbp6	73	76.307	ENSHCOG00000012544	gtpbp6	91	76.140	Hippocampus_comes
ENSCVAG00000015417	gtpbp6	99	69.407	ENSIPUG00000022531	gtpbp6	96	69.790	Ictalurus_punctatus
ENSCVAG00000015417	gtpbp6	100	78.967	ENSKMAG00000016464	gtpbp6	100	78.776	Kryptolebias_marmoratus
ENSCVAG00000015417	gtpbp6	96	76.641	ENSLBEG00000024203	gtpbp6	98	76.641	Labrus_bergylta
ENSCVAG00000015417	gtpbp6	86	72.727	ENSLACG00000012754	GTPBP6	79	72.831	Latimeria_chalumnae
ENSCVAG00000015417	gtpbp6	92	69.895	ENSLOCG00000008009	gtpbp6	99	69.895	Lepisosteus_oculatus
ENSCVAG00000015417	gtpbp6	83	64.403	ENSMFAG00000041568	GTPBP6	84	63.636	Macaca_fascicularis
ENSCVAG00000015417	gtpbp6	83	54.801	ENSMNEG00000039609	GTPBP6	83	54.091	Macaca_nemestrina
ENSCVAG00000015417	gtpbp6	100	77.547	ENSMAMG00000012631	gtpbp6	100	77.925	Mastacembelus_armatus
ENSCVAG00000015417	gtpbp6	100	77.298	ENSMZEG00005002869	gtpbp6	99	76.880	Maylandia_zebra
ENSCVAG00000015417	gtpbp6	71	67.575	ENSMGAG00000014752	GTPBP6	91	67.575	Meleagris_gallopavo
ENSCVAG00000015417	gtpbp6	99	76.078	ENSMMOG00000005950	gtpbp6	96	75.686	Mola_mola
ENSCVAG00000015417	gtpbp6	83	66.903	ENSMODG00000000326	GTPBP6	93	65.982	Monodelphis_domestica
ENSCVAG00000015417	gtpbp6	100	75.235	ENSMALG00000014993	gtpbp6	100	75.235	Monopterus_albus
ENSCVAG00000015417	gtpbp6	82	55.476	MGP_CAROLIEiJ_G0027536	Gtpbp6	85	54.338	Mus_caroli
ENSCVAG00000015417	gtpbp6	82	56.667	ENSMUSG00000033434	Gtpbp6	85	55.479	Mus_musculus
ENSCVAG00000015417	gtpbp6	82	56.429	MGP_SPRETEiJ_G0028534	Gtpbp6	85	55.251	Mus_spretus
ENSCVAG00000015417	gtpbp6	78	62.406	ENSMPUG00000001536	GTPBP6	86	62.406	Mustela_putorius_furo
ENSCVAG00000015417	gtpbp6	82	59.294	ENSNGAG00000011609	Gtpbp6	82	59.294	Nannospalax_galili
ENSCVAG00000015417	gtpbp6	100	78.987	ENSNBRG00000017629	gtpbp6	99	78.571	Neolamprologus_brichardi
ENSCVAG00000015417	gtpbp6	55	69.014	ENSMEUG00000001355	-	100	58.486	Notamacropus_eugenii
ENSCVAG00000015417	gtpbp6	81	57.590	ENSODEG00000001052	GTPBP6	82	57.590	Octodon_degus
ENSCVAG00000015417	gtpbp6	98	79.961	ENSONIG00000007330	gtpbp6	99	78.998	Oreochromis_niloticus
ENSCVAG00000015417	gtpbp6	82	54.419	ENSOANG00000007007	-	93	54.419	Ornithorhynchus_anatinus
ENSCVAG00000015417	gtpbp6	83	60.000	ENSOCUG00000008245	GTPBP6	94	54.418	Oryctolagus_cuniculus
ENSCVAG00000015417	gtpbp6	100	78.269	ENSORLG00000016077	gtpbp6	99	78.269	Oryzias_latipes
ENSCVAG00000015417	gtpbp6	100	78.544	ENSORLG00020018687	gtpbp6	99	78.311	Oryzias_latipes_hni
ENSCVAG00000015417	gtpbp6	100	77.969	ENSORLG00015014255	gtpbp6	99	77.735	Oryzias_latipes_hsok
ENSCVAG00000015417	gtpbp6	99	79.845	ENSOMEG00000004496	gtpbp6	98	79.612	Oryzias_melastigma
ENSCVAG00000015417	gtpbp6	83	63.615	ENSOGAG00000011327	GTPBP6	98	62.585	Otolemur_garnettii
ENSCVAG00000015417	gtpbp6	78	58.722	ENSOARG00000000946	GTPBP6	98	58.722	Ovis_aries
ENSCVAG00000015417	gtpbp6	73	63.539	ENSPPAG00000028400	-	82	63.539	Pan_paniscus
ENSCVAG00000015417	gtpbp6	83	54.673	ENSPPRG00000004932	-	86	53.968	Panthera_pardus
ENSCVAG00000015417	gtpbp6	83	47.685	ENSPPRG00000006710	-	80	47.653	Panthera_pardus
ENSCVAG00000015417	gtpbp6	83	63.700	ENSPTRG00000050696	GTPBP6	83	63.700	Pan_troglodytes
ENSCVAG00000015417	gtpbp6	83	61.358	ENSPANG00000011580	GTPBP6	84	60.682	Papio_anubis
ENSCVAG00000015417	gtpbp6	92	74.947	ENSPKIG00000022514	gtpbp6	79	78.588	Paramormyrops_kingsleyae
ENSCVAG00000015417	gtpbp6	78	70.075	ENSPSIG00000013117	GTPBP6	99	70.075	Pelodiscus_sinensis
ENSCVAG00000015417	gtpbp6	78	52.381	ENSPMAG00000006496	gtpbp6	99	52.381	Petromyzon_marinus
ENSCVAG00000015417	gtpbp6	83	66.903	ENSPCIG00000016456	GTPBP6	85	65.982	Phascolarctos_cinereus
ENSCVAG00000015417	gtpbp6	99	84.302	ENSPFOG00000015695	gtpbp6	100	90.476	Poecilia_formosa
ENSCVAG00000015417	gtpbp6	99	84.884	ENSPLAG00000015495	gtpbp6	99	85.659	Poecilia_latipinna
ENSCVAG00000015417	gtpbp6	100	84.866	ENSPMEG00000000859	gtpbp6	100	85.824	Poecilia_mexicana
ENSCVAG00000015417	gtpbp6	100	84.808	ENSPREG00000017643	gtpbp6	100	85.769	Poecilia_reticulata
ENSCVAG00000015417	gtpbp6	54	65.818	ENSPPYG00000020075	-	100	65.818	Pongo_abelii
ENSCVAG00000015417	gtpbp6	100	78.049	ENSPNYG00000000521	gtpbp6	98	77.632	Pundamilia_nyererei
ENSCVAG00000015417	gtpbp6	92	74.214	ENSPNAG00000002094	gtpbp6	87	73.529	Pygocentrus_nattereri
ENSCVAG00000015417	gtpbp6	84	55.711	ENSRNOG00000048168	Gtpbp6	85	55.479	Rattus_norvegicus
ENSCVAG00000015417	gtpbp6	84	55.711	ENSRNOG00000037426	Gtpbp6	85	55.479	Rattus_norvegicus
ENSCVAG00000015417	gtpbp6	83	64.637	ENSRBIG00000027538	GTPBP6	84	63.864	Rhinopithecus_bieti
ENSCVAG00000015417	gtpbp6	83	64.169	ENSRROG00000033503	GTPBP6	84	63.409	Rhinopithecus_roxellana
ENSCVAG00000015417	gtpbp6	83	68.235	ENSSHAG00000015570	GTPBP6	84	67.500	Sarcophilus_harrisii
ENSCVAG00000015417	gtpbp6	98	72.211	ENSSFOG00015004098	gtpbp6	78	79.773	Scleropages_formosus
ENSCVAG00000015417	gtpbp6	100	76.636	ENSSMAG00000019520	gtpbp6	100	76.822	Scophthalmus_maximus
ENSCVAG00000015417	gtpbp6	97	79.487	ENSSDUG00000002202	gtpbp6	93	79.249	Seriola_dumerili
ENSCVAG00000015417	gtpbp6	92	81.120	ENSSLDG00000023633	gtpbp6	92	84.842	Seriola_lalandi_dorsalis
ENSCVAG00000015417	gtpbp6	98	59.646	ENSSPUG00000005537	GTPBP6	85	65.297	Sphenodon_punctatus
ENSCVAG00000015417	gtpbp6	100	76.111	ENSSPAG00000017406	gtpbp6	100	75.926	Stegastes_partitus
ENSCVAG00000015417	gtpbp6	56	87.197	ENSSPAG00000017331	gtpbp6	96	87.197	Stegastes_partitus
ENSCVAG00000015417	gtpbp6	83	61.882	ENSSSCG00000033858	-	84	60.909	Sus_scrofa
ENSCVAG00000015417	gtpbp6	83	61.882	ENSSSCG00000037491	-	84	60.909	Sus_scrofa
ENSCVAG00000015417	gtpbp6	84	66.121	ENSTGUG00000010642	-	95	66.121	Taeniopygia_guttata
ENSCVAG00000015417	gtpbp6	99	77.476	ENSTRUG00000011175	gtpbp6	99	76.744	Takifugu_rubripes
ENSCVAG00000015417	gtpbp6	86	82.844	ENSTNIG00000010659	gtpbp6	99	82.805	Tetraodon_nigroviridis
ENSCVAG00000015417	gtpbp6	79	62.438	ENSUMAG00000018848	GTPBP6	99	62.438	Ursus_maritimus
ENSCVAG00000015417	gtpbp6	75	61.358	ENSVVUG00000008199	GTPBP6	66	61.358	Vulpes_vulpes
ENSCVAG00000015417	gtpbp6	83	67.916	ENSXETG00000004125	gtpbp6	83	66.667	Xenopus_tropicalis
ENSCVAG00000015417	gtpbp6	72	83.069	ENSXCOG00000006281	gtpbp6	76	84.392	Xiphophorus_couchianus
ENSCVAG00000015417	gtpbp6	100	84.808	ENSXMAG00000015980	gtpbp6	100	85.769	Xiphophorus_maculatus