EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000015451 (Gene tree)
Gene ID: 107094306
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: RAB18%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 14661 bases
Position: chrKL652976.1:33280-47940
Accession: 107094306
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000012973	MMR_HSR1	PF01926.23	2.8e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000020365	-	2484	XM_015389849	ENSCVAP00000012973	204 (aa)	XP_015245335	UPI0007426397
ENSCVAT00000020359	-	543	-	ENSCVAP00000012970	180 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000015451's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015451's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000015451	rab18a	95	45.918	ENSCVAG00000022799	-	82	49.701
ENSCVAG00000015451	rab18a	84	37.356	ENSCVAG00000011432	rabl2	78	37.356
ENSCVAG00000015451	rab18a	81	37.647	ENSCVAG00000002953	RAB9A	85	37.647
ENSCVAG00000015451	rab18a	93	34.536	ENSCVAG00000021826	rab9b	82	36.747
ENSCVAG00000015451	rab18a	77	30.864	ENSCVAG00000001281	rhebl1	85	31.646
ENSCVAG00000015451	rab18a	80	32.317	ENSCVAG00000006062	KRAS	87	32.317
ENSCVAG00000015451	rab18a	79	45.679	ENSCVAG00000019751	-	75	45.122
ENSCVAG00000015451	rab18a	94	39.175	ENSCVAG00000014416	-	82	42.529
ENSCVAG00000015451	rab18a	83	39.181	ENSCVAG00000004751	rab6bb	80	39.181
ENSCVAG00000015451	rab18a	84	51.445	ENSCVAG00000018085	rab30	84	51.445
ENSCVAG00000015451	rab18a	80	48.171	ENSCVAG00000022353	rab14	76	48.171
ENSCVAG00000015451	rab18a	82	43.787	ENSCVAG00000008276	RAB15	84	50.962
ENSCVAG00000015451	rab18a	80	44.242	ENSCVAG00000009550	rab5c	81	42.222
ENSCVAG00000015451	rab18a	84	38.728	ENSCVAG00000014915	RAB39B	81	38.728
ENSCVAG00000015451	rab18a	79	35.928	ENSCVAG00000014038	RAB29	81	35.928
ENSCVAG00000015451	rab18a	95	44.660	ENSCVAG00000017623	rab2a	78	51.205
ENSCVAG00000015451	rab18a	79	45.062	ENSCVAG00000013878	rab11a	75	45.062
ENSCVAG00000015451	rab18a	84	47.674	ENSCVAG00000012806	rab35b	91	45.405
ENSCVAG00000015451	rab18a	81	33.133	ENSCVAG00000008670	hrasb	87	33.133
ENSCVAG00000015451	rab18a	83	39.535	ENSCVAG00000015862	-	81	39.535
ENSCVAG00000015451	rab18a	79	45.679	ENSCVAG00000019718	-	74	45.679
ENSCVAG00000015451	rab18a	79	48.171	ENSCVAG00000003539	rab12	66	48.171
ENSCVAG00000015451	rab18a	80	45.732	ENSCVAG00000003537	si:dkey-16l2.16	82	44.068
ENSCVAG00000015451	rab18a	95	45.918	ENSCVAG00000022585	-	85	48.000
ENSCVAG00000015451	rab18a	85	34.659	ENSCVAG00000018191	rab34a	66	34.659
ENSCVAG00000015451	rab18a	79	31.707	ENSCVAG00000006083	si:cabz01085950.1	81	31.707
ENSCVAG00000015451	rab18a	80	37.725	ENSCVAG00000000281	RAB7A	81	37.725
ENSCVAG00000015451	rab18a	87	39.106	ENSCVAG00000022249	rab6a	84	39.106
ENSCVAG00000015451	rab18a	88	43.243	ENSCVAG00000022649	-	90	43.243
ENSCVAG00000015451	rab18a	80	43.713	ENSCVAG00000017064	si:dkey-34d22.5	75	43.713
ENSCVAG00000015451	rab18a	79	45.679	ENSCVAG00000017021	-	74	45.679
ENSCVAG00000015451	rab18a	98	39.234	ENSCVAG00000020016	rab11al	85	41.304
ENSCVAG00000015451	rab18a	80	41.818	ENSCVAG00000018433	rab22a	85	41.818
ENSCVAG00000015451	rab18a	75	42.857	ENSCVAG00000000862	-	71	42.857
ENSCVAG00000015451	rab18a	77	32.099	ENSCVAG00000004027	rheb	86	32.099
ENSCVAG00000015451	rab18a	89	42.935	ENSCVAG00000010727	rab4a	86	42.935
ENSCVAG00000015451	rab18a	82	35.882	ENSCVAG00000008389	si:ch73-116o1.2	81	35.882
ENSCVAG00000015451	rab18a	79	38.554	ENSCVAG00000016312	rab9a	78	38.554
ENSCVAG00000015451	rab18a	80	37.725	ENSCVAG00000005429	-	81	37.725
ENSCVAG00000015451	rab18a	71	44.218	ENSCVAG00000011665	rab33a	54	44.218
ENSCVAG00000015451	rab18a	83	39.766	ENSCVAG00000012889	rab6ba	80	39.766
ENSCVAG00000015451	rab18a	91	35.106	ENSCVAG00000020501	rab23	88	35.106
ENSCVAG00000015451	rab18a	72	40.268	ENSCVAG00000001150	si:dkey-13a21.4	73	40.268
ENSCVAG00000015451	rab18a	71	41.497	ENSCVAG00000019227	zgc:101559	63	41.497
ENSCVAG00000015451	rab18a	79	44.444	ENSCVAG00000020003	rab25b	80	44.375
ENSCVAG00000015451	rab18a	79	51.235	ENSCVAG00000009222	zgc:171927	75	51.235
ENSCVAG00000015451	rab18a	79	43.827	ENSCVAG00000008126	-	76	43.827
ENSCVAG00000015451	rab18a	83	38.596	ENSCVAG00000001618	rab41	79	38.596
ENSCVAG00000015451	rab18a	95	38.384	ENSCVAG00000008239	rab5aa	86	40.741

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015451	rab18a	100	94.608	ENSAPOG00000010760	rab18a	94	95.312	Acanthochromis_polyacanthus
ENSCVAG00000015451	rab18a	100	84.804	ENSACIG00000009617	rab18a	93	84.896	Amphilophus_citrinellus
ENSCVAG00000015451	rab18a	100	95.098	ENSAOCG00000016233	rab18a	94	95.833	Amphiprion_ocellaris
ENSCVAG00000015451	rab18a	100	95.098	ENSAPEG00000005392	rab18a	94	95.833	Amphiprion_percula
ENSCVAG00000015451	rab18a	100	93.137	ENSATEG00000021911	rab18a	94	93.750	Anabas_testudineus
ENSCVAG00000015451	rab18a	100	87.317	ENSACAG00000005463	-	94	88.601	Anolis_carolinensis
ENSCVAG00000015451	rab18a	100	94.608	ENSACLG00000011484	rab18a	96	94.898	Astatotilapia_calliptera
ENSCVAG00000015451	rab18a	100	86.408	ENSCPBG00000015839	-	93	88.482	Chrysemys_picta_bellii
ENSCVAG00000015451	rab18a	96	70.149	ENSCPBG00000027619	-	94	71.053	Chrysemys_picta_bellii
ENSCVAG00000015451	rab18a	97	75.377	ENSCING00000006838	-	95	77.249	Ciona_intestinalis
ENSCVAG00000015451	rab18a	97	74.372	ENSCSAVG00000010348	-	97	75.130	Ciona_savignyi
ENSCVAG00000015451	rab18a	100	94.118	ENSCSEG00000011816	rab18a	94	94.792	Cynoglossus_semilaevis
ENSCVAG00000015451	rab18a	100	81.951	ENSDARG00000055291	rab18a	92	84.656	Danio_rerio
ENSCVAG00000015451	rab18a	100	90.732	ENSELUG00000003805	rab18a	93	91.623	Esox_lucius
ENSCVAG00000015451	rab18a	100	97.059	ENSFHEG00000019455	rab18a	100	97.059	Fundulus_heteroclitus
ENSCVAG00000015451	rab18a	100	97.549	ENSGAFG00000002790	rab18a	100	97.549	Gambusia_affinis
ENSCVAG00000015451	rab18a	100	86.408	ENSGAGG00000015642	-	93	88.482	Gopherus_agassizii
ENSCVAG00000015451	rab18a	100	94.608	ENSHBUG00000001518	rab18a	96	94.898	Haplochromis_burtoni
ENSCVAG00000015451	rab18a	99	94.581	ENSLBEG00000005861	rab18a	90	94.792	Labrus_bergylta
ENSCVAG00000015451	rab18a	93	88.421	ENSLACG00000009310	rab18a	92	88.421	Latimeria_chalumnae
ENSCVAG00000015451	rab18a	100	89.268	ENSLOCG00000007491	rab18a	93	90.052	Lepisosteus_oculatus
ENSCVAG00000015451	rab18a	100	92.157	ENSMAMG00000014320	rab18a	94	92.708	Mastacembelus_armatus
ENSCVAG00000015451	rab18a	100	94.118	ENSMZEG00005017235	rab18a	94	95.312	Maylandia_zebra
ENSCVAG00000015451	rab18a	100	93.627	ENSMALG00000009813	rab18a	94	94.271	Monopterus_albus
ENSCVAG00000015451	rab18a	100	94.608	ENSNBRG00000013507	rab18a	96	94.898	Neolamprologus_brichardi
ENSCVAG00000015451	rab18a	96	95.408	ENSORLG00000004624	rab18a	96	95.408	Oryzias_latipes
ENSCVAG00000015451	rab18a	96	95.918	ENSORLG00020008333	rab18a	96	95.918	Oryzias_latipes_hni
ENSCVAG00000015451	rab18a	96	94.898	ENSORLG00015004739	rab18a	96	94.898	Oryzias_latipes_hsok
ENSCVAG00000015451	rab18a	94	95.288	ENSOMEG00000020605	rab18a	94	95.312	Oryzias_melastigma
ENSCVAG00000015451	rab18a	100	87.805	ENSPKIG00000009825	rab18a	92	90.476	Paramormyrops_kingsleyae
ENSCVAG00000015451	rab18a	100	93.137	ENSPMGG00000020409	-	94	93.229	Periophthalmus_magnuspinnatus
ENSCVAG00000015451	rab18a	100	97.549	ENSPFOG00000007571	rab18a	100	97.549	Poecilia_formosa
ENSCVAG00000015451	rab18a	100	97.549	ENSPLAG00000010104	rab18a	100	97.549	Poecilia_latipinna
ENSCVAG00000015451	rab18a	100	97.549	ENSPMEG00000013085	rab18a	100	97.549	Poecilia_mexicana
ENSCVAG00000015451	rab18a	100	97.549	ENSPREG00000005923	rab18a	83	97.549	Poecilia_reticulata
ENSCVAG00000015451	rab18a	100	94.608	ENSPNYG00000007064	rab18a	96	94.898	Pundamilia_nyererei
ENSCVAG00000015451	rab18a	99	80.100	ENSPNAG00000011548	rab18a	95	82.632	Pygocentrus_nattereri
ENSCVAG00000015451	rab18a	100	90.244	ENSSFOG00015017444	rab18a	78	91.579	Scleropages_formosus
ENSCVAG00000015451	rab18a	94	91.710	ENSSMAG00000002969	rab18a	94	91.710	Scophthalmus_maximus
ENSCVAG00000015451	rab18a	96	94.388	ENSSDUG00000003823	rab18a	96	94.388	Seriola_dumerili
ENSCVAG00000015451	rab18a	96	94.388	ENSSLDG00000006977	rab18a	96	94.388	Seriola_lalandi_dorsalis
ENSCVAG00000015451	rab18a	93	89.418	ENSSPUG00000017677	-	92	88.947	Sphenodon_punctatus
ENSCVAG00000015451	rab18a	100	90.686	ENSTRUG00000004984	rab18a	94	91.146	Takifugu_rubripes
ENSCVAG00000015451	rab18a	100	86.408	ENSUMAG00000015574	-	91	88.830	Ursus_maritimus
ENSCVAG00000015451	rab18a	100	87.379	ENSXETG00000004556	rab18	93	89.062	Xenopus_tropicalis
ENSCVAG00000015451	rab18a	100	98.039	ENSXMAG00000024122	rab18a	100	98.039	Xiphophorus_maculatus