EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000015579 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: FA complementation group M
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 52517 bases
Position: chrKL652705.1:487838-540354
Accession: 107088066
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000013080	ResIII	PF04851.15	1.5e-18	1	1
ENSCVAP00000013080	DEAD	PF00270.29	6.2e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000020501	-	5295	XM_015379997	ENSCVAP00000013080	1764 (aa)	XP_015235483	-

Gene Model

Click here to download ENSCVAG00000015579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015579's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015579	-	68	60.494	ENSG00000187790	FANCM	86	65.972	Homo_sapiens
ENSCVAG00000015579	-	67	60.833	ENSAMEG00000002114	FANCM	60	60.472	Ailuropoda_melanoleuca
ENSCVAG00000015579	-	96	64.587	ENSATEG00000012412	-	87	64.587	Anabas_testudineus
ENSCVAG00000015579	-	67	60.167	ENSANAG00000025075	FANCM	60	60.028	Aotus_nancymaae
ENSCVAG00000015579	-	98	62.218	ENSACLG00000016008	-	89	62.218	Astatotilapia_calliptera
ENSCVAG00000015579	-	81	48.570	ENSAMXG00000020275	-	87	48.242	Astyanax_mexicanus
ENSCVAG00000015579	-	67	61.080	ENSBTAG00000002612	FANCM	76	69.014	Bos_taurus
ENSCVAG00000015579	-	62	60.585	ENSCJAG00000015945	FANCM	53	60.446	Callithrix_jacchus
ENSCVAG00000015579	-	66	60.278	ENSCAFG00000014062	FANCM	59	60.223	Canis_familiaris
ENSCVAG00000015579	-	74	54.162	ENSCHIG00000015176	FANCM	66	53.927	Capra_hircus
ENSCVAG00000015579	-	67	60.141	ENSCPOG00000001446	FANCM	61	59.859	Cavia_porcellus
ENSCVAG00000015579	-	68	60.362	ENSCCAG00000026593	FANCM	62	60.223	Cebus_capucinus
ENSCVAG00000015579	-	67	60.166	ENSCATG00000031379	FANCM	60	59.862	Cercocebus_atys
ENSCVAG00000015579	-	67	60.304	ENSCSAG00000015308	FANCM	60	60.000	Chlorocebus_sabaeus
ENSCVAG00000015579	-	65	55.834	ENSCPBG00000015089	FANCM	58	55.013	Chrysemys_picta_bellii
ENSCVAG00000015579	-	67	60.304	ENSCANG00000029498	FANCM	60	60.000	Colobus_angolensis_palliatus
ENSCVAG00000015579	-	67	59.085	ENSCGRG00001023573	Fancm	62	58.774	Cricetulus_griseus_chok1gshd
ENSCVAG00000015579	-	97	57.836	ENSCSEG00000002313	-	88	56.814	Cynoglossus_semilaevis
ENSCVAG00000015579	-	68	58.047	ENSDNOG00000007697	FANCM	62	57.916	Dasypus_novemcinctus
ENSCVAG00000015579	-	69	58.498	ENSDORG00000010095	Fancm	63	57.839	Dipodomys_ordii
ENSCVAG00000015579	-	70	58.430	ENSEASG00005007781	FANCM	88	66.025	Equus_asinus_asinus
ENSCVAG00000015579	-	98	50.431	ENSELUG00000015761	-	97	49.893	Esox_lucius
ENSCVAG00000015579	-	67	53.030	ENSFALG00000001703	FANCM	64	52.957	Ficedula_albicollis
ENSCVAG00000015579	-	67	59.805	ENSFDAG00000009043	FANCM	59	59.280	Fukomys_damarensis
ENSCVAG00000015579	-	92	66.977	ENSGMOG00000002019	-	96	52.171	Gadus_morhua
ENSCVAG00000015579	-	89	43.126	ENSGALG00000031182	FANCM	83	42.722	Gallus_gallus
ENSCVAG00000015579	-	98	54.756	ENSGACG00000009448	-	97	54.602	Gasterosteus_aculeatus
ENSCVAG00000015579	-	68	60.631	ENSGGOG00000008546	FANCM	60	60.246	Gorilla_gorilla
ENSCVAG00000015579	-	98	62.030	ENSHBUG00000007085	-	89	62.030	Haplochromis_burtoni
ENSCVAG00000015579	-	67	58.904	ENSHGLG00000013787	FANCM	59	58.978	Heterocephalus_glaber_female
ENSCVAG00000015579	-	67	58.904	ENSHGLG00100006377	FANCM	59	58.978	Heterocephalus_glaber_male
ENSCVAG00000015579	-	98	47.522	ENSIPUG00000014629	fancm	93	47.794	Ictalurus_punctatus
ENSCVAG00000015579	-	89	62.473	ENSLBEG00000004982	-	89	61.752	Labrus_bergylta
ENSCVAG00000015579	-	89	50.224	ENSLACG00000007739	FANCM	78	50.224	Latimeria_chalumnae
ENSCVAG00000015579	-	92	50.936	ENSLOCG00000011318	FANCM	84	49.436	Lepisosteus_oculatus
ENSCVAG00000015579	-	66	61.080	ENSLAFG00000001136	FANCM	65	56.473	Loxodonta_africana
ENSCVAG00000015579	-	67	60.028	ENSMFAG00000000383	FANCM	60	59.724	Macaca_fascicularis
ENSCVAG00000015579	-	67	60.028	ENSMMUG00000016513	FANCM	60	59.724	Macaca_mulatta
ENSCVAG00000015579	-	67	60.028	ENSMNEG00000038659	FANCM	60	59.724	Macaca_nemestrina
ENSCVAG00000015579	-	67	54.972	ENSMLEG00000035743	FANCM	57	54.108	Mandrillus_leucophaeus
ENSCVAG00000015579	-	96	61.202	ENSMAMG00000007087	-	88	62.364	Mastacembelus_armatus
ENSCVAG00000015579	-	98	61.842	ENSMZEG00005004644	-	89	62.030	Maylandia_zebra
ENSCVAG00000015579	-	73	51.691	ENSMAUG00000015450	Fancm	67	51.030	Mesocricetus_auratus
ENSCVAG00000015579	-	67	60.858	ENSMICG00000005811	FANCM	60	60.304	Microcebus_murinus
ENSCVAG00000015579	-	63	59.916	ENSMOCG00000008775	Fancm	56	59.358	Microtus_ochrogaster
ENSCVAG00000015579	-	94	66.000	ENSMMOG00000010215	-	95	66.180	Mola_mola
ENSCVAG00000015579	-	69	56.538	ENSMODG00000007334	FANCM	62	56.572	Monodelphis_domestica
ENSCVAG00000015579	-	67	58.310	MGP_CAROLIEiJ_G0017791	Fancm	61	58.172	Mus_caroli
ENSCVAG00000015579	-	64	57.584	ENSMUSG00000055884	Fancm	86	64.223	Mus_musculus
ENSCVAG00000015579	-	67	55.082	MGP_PahariEiJ_G0029547	Fancm	60	54.396	Mus_pahari
ENSCVAG00000015579	-	63	58.840	MGP_SPRETEiJ_G0018636	Fancm	54	58.726	Mus_spretus
ENSCVAG00000015579	-	67	60.388	ENSMPUG00000004849	FANCM	60	60.388	Mustela_putorius_furo
ENSCVAG00000015579	-	66	57.011	ENSMLUG00000006671	FANCM	58	56.258	Myotis_lucifugus
ENSCVAG00000015579	-	64	57.641	ENSNGAG00000017199	Fancm	58	57.239	Nannospalax_galili
ENSCVAG00000015579	-	68	60.411	ENSNLEG00000004432	FANCM	60	60.109	Nomascus_leucogenys
ENSCVAG00000015579	-	88	81.653	ENSONIG00000003531	-	80	81.523	Oreochromis_niloticus
ENSCVAG00000015579	-	89	43.697	ENSOANG00000013997	FANCM	85	43.239	Ornithorhynchus_anatinus
ENSCVAG00000015579	-	67	61.026	ENSOCUG00000007539	FANCM	69	51.872	Oryctolagus_cuniculus
ENSCVAG00000015579	-	99	59.098	ENSORLG00000014503	-	94	59.257	Oryzias_latipes
ENSCVAG00000015579	-	99	59.486	ENSORLG00020013516	-	94	59.518	Oryzias_latipes_hni
ENSCVAG00000015579	-	99	59.538	ENSORLG00015012100	-	94	59.674	Oryzias_latipes_hsok
ENSCVAG00000015579	-	95	63.826	ENSOMEG00000010717	-	87	65.028	Oryzias_melastigma
ENSCVAG00000015579	-	65	60.055	ENSOGAG00000003015	FANCM	54	59.778	Otolemur_garnettii
ENSCVAG00000015579	-	67	60.362	ENSOARG00000009429	FANCM	60	60.083	Ovis_aries
ENSCVAG00000015579	-	68	60.631	ENSPPAG00000028944	FANCM	60	60.246	Pan_paniscus
ENSCVAG00000015579	-	68	60.357	ENSPTRG00000006307	FANCM	60	59.973	Pan_troglodytes
ENSCVAG00000015579	-	67	60.028	ENSPANG00000023200	FANCM	60	59.724	Papio_anubis
ENSCVAG00000015579	-	67	58.091	ENSPEMG00000005619	Fancm	62	57.778	Peromyscus_maniculatus_bairdii
ENSCVAG00000015579	-	93	82.444	ENSPFOG00000002008	-	82	81.997	Poecilia_formosa
ENSCVAG00000015579	-	82	81.223	ENSPLAG00000014164	-	88	69.775	Poecilia_latipinna
ENSCVAG00000015579	-	96	80.786	ENSPMEG00000010746	-	93	66.920	Poecilia_mexicana
ENSCVAG00000015579	-	99	65.449	ENSPREG00000019849	-	93	65.753	Poecilia_reticulata
ENSCVAG00000015579	-	68	60.219	ENSPPYG00000005781	FANCM	74	59.836	Pongo_abelii
ENSCVAG00000015579	-	62	52.958	ENSPCAG00000011363	-	55	54.277	Procavia_capensis
ENSCVAG00000015579	-	60	78.351	ENSPCOG00000014388	FANCM	56	78.351	Propithecus_coquereli
ENSCVAG00000015579	-	61	77.273	ENSPVAG00000015802	FANCM	55	77.273	Pteropus_vampyrus
ENSCVAG00000015579	-	93	49.231	ENSPNAG00000013558	-	85	48.996	Pygocentrus_nattereri
ENSCVAG00000015579	-	68	56.140	ENSRNOG00000056721	Fancm	92	48.342	Rattus_norvegicus
ENSCVAG00000015579	-	67	60.028	ENSRBIG00000011451	FANCM	60	59.448	Rhinopithecus_bieti
ENSCVAG00000015579	-	67	60.333	ENSRROG00000028917	FANCM	60	59.889	Rhinopithecus_roxellana
ENSCVAG00000015579	-	70	57.667	ENSSBOG00000030882	FANCM	63	57.556	Saimiri_boliviensis_boliviensis
ENSCVAG00000015579	-	64	58.209	ENSSHAG00000000507	FANCM	64	57.666	Sarcophilus_harrisii
ENSCVAG00000015579	-	97	60.894	ENSSMAG00000019903	-	65	90.406	Scophthalmus_maximus
ENSCVAG00000015579	-	69	60.000	ENSSDUG00000016682	-	93	83.811	Seriola_dumerili
ENSCVAG00000015579	-	98	63.803	ENSSLDG00000003408	-	89	64.717	Seriola_lalandi_dorsalis
ENSCVAG00000015579	-	63	59.639	ENSSSCG00000005000	FANCM	55	58.840	Sus_scrofa
ENSCVAG00000015579	-	98	57.514	ENSTNIG00000017277	-	91	58.813	Tetraodon_nigroviridis
ENSCVAG00000015579	-	68	57.487	ENSTTRG00000006669	FANCM	61	57.181	Tursiops_truncatus
ENSCVAG00000015579	-	62	70.290	ENSVPAG00000005763	FANCM	55	70.290	Vicugna_pacos
ENSCVAG00000015579	-	66	60.278	ENSVVUG00000000357	FANCM	59	60.362	Vulpes_vulpes
ENSCVAG00000015579	-	99	65.185	ENSXMAG00000007702	-	93	65.273	Xiphophorus_maculatus