EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000015626 (Gene tree)
Gene ID: 107085831
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 21649 bases
Position: chrKL652634.1:1265675-1287323
Accession: 107085831
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000028522	AF-4	PF05110.13	2.6e-243	1	3
ENSCVAP00000028522	AF-4	PF05110.13	2.6e-243	2	3
ENSCVAP00000028522	AF-4	PF05110.13	2.6e-243	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000020615	-	6262	XM_015376424	ENSCVAP00000028522	1058 (aa)	XP_015231910	UPI000742B930

Gene Model

Click here to download ENSCVAG00000015626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015626	-	100	52.048	ENSAPOG00000002994	-	100	51.621	Acanthochromis_polyacanthus
ENSCVAG00000015626	-	55	48.421	ENSAMEG00000003337	AFF1	68	32.471	Ailuropoda_melanoleuca
ENSCVAG00000015626	-	76	55.647	ENSACIG00000021066	-	96	54.366	Amphilophus_citrinellus
ENSCVAG00000015626	-	100	53.373	ENSAOCG00000020283	-	100	52.434	Amphiprion_ocellaris
ENSCVAG00000015626	-	100	53.072	ENSAPEG00000018794	-	100	51.536	Amphiprion_percula
ENSCVAG00000015626	-	100	49.280	ENSATEG00000015552	-	99	49.025	Anabas_testudineus
ENSCVAG00000015626	-	99	32.909	ENSAPLG00000004059	AFF1	99	32.980	Anas_platyrhynchos
ENSCVAG00000015626	-	99	50.749	ENSACLG00000002905	-	98	50.089	Astatotilapia_calliptera
ENSCVAG00000015626	-	68	37.677	ENSCJAG00000006047	AFF1	78	34.858	Callithrix_jacchus
ENSCVAG00000015626	-	57	50.877	ENSCAFG00000023079	AFF3	50	51.064	Canis_familiaris
ENSCVAG00000015626	-	56	56.897	ENSCAPG00000006540	AFF1	54	55.319	Cavia_aperea
ENSCVAG00000015626	-	56	56.897	ENSCPOG00000034568	AFF1	52	55.319	Cavia_porcellus
ENSCVAG00000015626	-	57	50.877	ENSCLAG00000017100	AFF3	63	51.064	Chinchilla_lanigera
ENSCVAG00000015626	-	74	36.810	ENSCPBG00000005382	AFF1	70	35.759	Chrysemys_picta_bellii
ENSCVAG00000015626	-	50	44.860	ENSCGRG00001015769	Aff1	81	34.848	Cricetulus_griseus_chok1gshd
ENSCVAG00000015626	-	57	45.763	ENSCGRG00000003408	Aff3	53	46.939	Cricetulus_griseus_crigri
ENSCVAG00000015626	-	79	33.745	ENSEASG00005012760	AFF1	68	34.230	Equus_asinus_asinus
ENSCVAG00000015626	-	99	38.551	ENSELUG00000019953	-	98	39.012	Esox_lucius
ENSCVAG00000015626	-	58	50.877	ENSFCAG00000029975	AFF3	52	51.064	Felis_catus
ENSCVAG00000015626	-	73	35.366	ENSFCAG00000029806	AFF1	68	34.402	Felis_catus
ENSCVAG00000015626	-	62	41.776	ENSFALG00000005554	AFF1	58	41.447	Ficedula_albicollis
ENSCVAG00000015626	-	77	62.685	ENSFHEG00000003521	-	100	62.116	Fundulus_heteroclitus
ENSCVAG00000015626	-	52	43.443	ENSGMOG00000008803	aff4	50	43.443	Gadus_morhua
ENSCVAG00000015626	-	66	45.556	ENSGALG00000043935	AFF1	70	35.730	Gallus_gallus
ENSCVAG00000015626	-	99	46.058	ENSGACG00000016333	-	97	54.179	Gasterosteus_aculeatus
ENSCVAG00000015626	-	100	50.616	ENSHBUG00000005828	-	98	49.866	Haplochromis_burtoni
ENSCVAG00000015626	-	99	44.850	ENSHCOG00000000539	-	98	44.180	Hippocampus_comes
ENSCVAG00000015626	-	50	34.028	ENSIPUG00000015259	-	94	34.062	Ictalurus_punctatus
ENSCVAG00000015626	-	50	47.863	ENSSTOG00000026695	AFF4	69	36.559	Ictidomys_tridecemlineatus
ENSCVAG00000015626	-	100	53.149	ENSKMAG00000013113	-	100	52.377	Kryptolebias_marmoratus
ENSCVAG00000015626	-	100	49.366	ENSLBEG00000016928	-	98	48.670	Labrus_bergylta
ENSCVAG00000015626	-	55	39.053	ENSLACG00000008849	AFF4	50	40.816	Latimeria_chalumnae
ENSCVAG00000015626	-	58	44.776	ENSLOCG00000004025	AFF1	68	42.299	Lepisosteus_oculatus
ENSCVAG00000015626	-	50	49.550	ENSLAFG00000010555	AFF4	68	35.463	Loxodonta_africana
ENSCVAG00000015626	-	99	51.079	ENSMAMG00000016189	-	97	50.563	Mastacembelus_armatus
ENSCVAG00000015626	-	99	50.837	ENSMZEG00005020442	-	98	50.179	Maylandia_zebra
ENSCVAG00000015626	-	56	41.436	ENSMAUG00000010241	Aff1	69	35.449	Mesocricetus_auratus
ENSCVAG00000015626	-	54	38.235	ENSMOCG00000017389	Aff1	68	34.794	Microtus_ochrogaster
ENSCVAG00000015626	-	100	50.810	ENSMALG00000002436	-	99	49.702	Monopterus_albus
ENSCVAG00000015626	-	57	49.153	MGP_CAROLIEiJ_G0014063	Aff3	52	48.980	Mus_caroli
ENSCVAG00000015626	-	57	49.153	ENSMUSG00000037138	Aff3	52	51.064	Mus_musculus
ENSCVAG00000015626	-	57	49.153	MGP_PahariEiJ_G0027310	Aff3	52	48.980	Mus_pahari
ENSCVAG00000015626	-	57	49.153	MGP_SPRETEiJ_G0014867	Aff3	52	48.980	Mus_spretus
ENSCVAG00000015626	-	78	33.333	ENSMPUG00000002270	AFF1	98	32.619	Mustela_putorius_furo
ENSCVAG00000015626	-	56	36.822	ENSMEUG00000014599	AFF2	50	36.965	Notamacropus_eugenii
ENSCVAG00000015626	-	100	47.826	ENSONIG00000007636	-	98	47.324	Oreochromis_niloticus
ENSCVAG00000015626	-	73	36.000	ENSOANG00000013624	AFF1	67	36.659	Ornithorhynchus_anatinus
ENSCVAG00000015626	-	51	47.863	ENSOCUG00000013635	AFF4	68	35.556	Oryctolagus_cuniculus
ENSCVAG00000015626	-	70	65.432	ENSORLG00000006428	-	99	59.259	Oryzias_latipes
ENSCVAG00000015626	-	84	65.432	ENSORLG00020003991	-	99	59.259	Oryzias_latipes_hni
ENSCVAG00000015626	-	84	65.432	ENSORLG00015009287	-	99	59.259	Oryzias_latipes_hsok
ENSCVAG00000015626	-	84	69.136	ENSOMEG00000005799	-	99	62.963	Oryzias_melastigma
ENSCVAG00000015626	-	72	35.606	ENSPPRG00000023590	AFF1	67	34.656	Panthera_pardus
ENSCVAG00000015626	-	57	50.877	ENSPPRG00000014330	AFF3	51	51.064	Panthera_pardus
ENSCVAG00000015626	-	71	35.606	ENSPTIG00000011838	AFF1	81	34.656	Panthera_tigris_altaica
ENSCVAG00000015626	-	61	60.345	ENSPTRG00000016255	AFF1	65	61.702	Pan_troglodytes
ENSCVAG00000015626	-	51	47.541	ENSPTRG00000017228	AFF4	79	35.123	Pan_troglodytes
ENSCVAG00000015626	-	73	38.974	ENSPSIG00000003759	AFF1	69	38.544	Pelodiscus_sinensis
ENSCVAG00000015626	-	51	45.378	ENSPFOG00000007079	aff4	50	45.378	Poecilia_formosa
ENSCVAG00000015626	-	100	64.831	ENSPFOG00000004581	-	100	63.943	Poecilia_formosa
ENSCVAG00000015626	-	51	45.378	ENSPLAG00000001837	aff4	50	45.378	Poecilia_latipinna
ENSCVAG00000015626	-	95	64.319	ENSPLAG00000012910	-	100	64.038	Poecilia_latipinna
ENSCVAG00000015626	-	51	45.378	ENSPMEG00000005613	aff4	50	45.378	Poecilia_mexicana
ENSCVAG00000015626	-	64	62.466	ENSPMEG00000020100	-	97	62.055	Poecilia_mexicana
ENSCVAG00000015626	-	100	64.470	ENSPREG00000003514	-	100	64.292	Poecilia_reticulata
ENSCVAG00000015626	-	77	33.860	ENSPPYG00000014910	AFF1	71	35.214	Pongo_abelii
ENSCVAG00000015626	-	57	50.877	ENSPCOG00000016986	AFF3	52	48.980	Propithecus_coquereli
ENSCVAG00000015626	-	99	49.278	ENSSMAG00000007062	-	97	48.508	Scophthalmus_maximus
ENSCVAG00000015626	-	58	47.532	ENSSDUG00000023775	-	96	47.612	Seriola_dumerili
ENSCVAG00000015626	-	100	49.916	ENSSLDG00000006836	-	99	50.419	Seriola_lalandi_dorsalis
ENSCVAG00000015626	-	59	62.712	ENSSPUG00000001574	AFF1	74	35.281	Sphenodon_punctatus
ENSCVAG00000015626	-	96	52.251	ENSSPAG00000003972	-	98	51.273	Stegastes_partitus
ENSCVAG00000015626	-	99	47.232	ENSTRUG00000014005	-	99	46.580	Takifugu_rubripes
ENSCVAG00000015626	-	99	42.467	ENSTNIG00000007537	-	98	41.701	Tetraodon_nigroviridis
ENSCVAG00000015626	-	67	37.255	ENSTBEG00000007536	AFF1	71	33.045	Tupaia_belangeri
ENSCVAG00000015626	-	50	38.095	ENSUMAG00000017952	AFF4	63	35.683	Ursus_maritimus
ENSCVAG00000015626	-	72	32.468	ENSUMAG00000025433	AFF1	82	32.543	Ursus_maritimus
ENSCVAG00000015626	-	60	37.248	ENSVVUG00000009263	AFF1	98	30.186	Vulpes_vulpes
ENSCVAG00000015626	-	50	50.000	ENSVVUG00000024524	AFF4	68	35.556	Vulpes_vulpes
ENSCVAG00000015626	-	57	50.877	ENSVVUG00000028696	AFF3	52	51.064	Vulpes_vulpes
ENSCVAG00000015626	-	100	64.795	ENSXMAG00000004657	-	100	64.260	Xiphophorus_maculatus