EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000015825 (Gene tree)
Gene ID: 107094290
Gene Symbol: -
Alias: -
Full Name: ataxin-2-like protein
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 15935 bases
Position: chrKL652975.1:453226-469160
Accession: 107094290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000013346	PAM2	PF07145.15	1.9e-05	1	1
ENSCVAP00000013346	LsmAD	PF06741.13	7.6e-17	1	1
ENSCVAP00000013346	SM-ATX	PF14438.6	3.6e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000020853	-	5256	XM_015389821	ENSCVAP00000013346	1017 (aa)	XP_015245307	UPI000742BABD

Gene Model

Click here to download ENSCVAG00000015825's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000015825's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000015825	-	97	42.279	ENSG00000168488	ATXN2L	100	65.957	Homo_sapiens
ENSCVAG00000015825	-	100	84.318	ENSAPOG00000021412	-	98	84.705	Acanthochromis_polyacanthus
ENSCVAG00000015825	-	52	55.415	ENSAPOG00000010103	atxn2l	99	52.314	Acanthochromis_polyacanthus
ENSCVAG00000015825	-	82	78.719	ENSACIG00000014731	-	93	78.032	Amphilophus_citrinellus
ENSCVAG00000015825	-	94	48.795	ENSACIG00000024435	atxn2l	70	67.286	Amphilophus_citrinellus
ENSCVAG00000015825	-	90	83.781	ENSAOCG00000002581	-	100	84.318	Amphiprion_ocellaris
ENSCVAG00000015825	-	100	84.638	ENSAPEG00000011038	-	100	85.121	Amphiprion_percula
ENSCVAG00000015825	-	100	84.139	ENSATEG00000019382	-	98	84.043	Anabas_testudineus
ENSCVAG00000015825	-	100	82.188	ENSACLG00000009975	-	98	82.381	Astatotilapia_calliptera
ENSCVAG00000015825	-	87	75.000	ENSAMXG00000003332	atxn2l	95	75.000	Astyanax_mexicanus
ENSCVAG00000015825	-	99	62.226	ENSAMXG00000020362	-	97	60.324	Astyanax_mexicanus
ENSCVAG00000015825	-	85	65.543	ENSCATG00000021354	ATXN2L	90	65.543	Cercocebus_atys
ENSCVAG00000015825	-	81	65.169	ENSCGRG00000001500	Atxn2l	61	34.887	Cricetulus_griseus_crigri
ENSCVAG00000015825	-	58	77.280	ENSCSEG00000008530	-	96	77.944	Cynoglossus_semilaevis
ENSCVAG00000015825	-	100	55.764	ENSDARG00000011597	atxn2l	98	54.911	Danio_rerio
ENSCVAG00000015825	-	81	65.283	ENSEASG00005014992	ATXN2L	67	65.283	Equus_asinus_asinus
ENSCVAG00000015825	-	99	56.670	ENSELUG00000023740	atxn2l	99	56.130	Esox_lucius
ENSCVAG00000015825	-	87	66.921	ENSELUG00000022915	-	89	65.721	Esox_lucius
ENSCVAG00000015825	-	66	80.608	ENSFHEG00000004491	-	84	79.076	Fundulus_heteroclitus
ENSCVAG00000015825	-	60	67.152	ENSGMOG00000006016	-	100	64.917	Gadus_morhua
ENSCVAG00000015825	-	59	63.492	ENSGMOG00000000316	atxn2l	79	64.286	Gadus_morhua
ENSCVAG00000015825	-	71	86.712	ENSGAFG00000019364	-	99	87.260	Gambusia_affinis
ENSCVAG00000015825	-	100	76.647	ENSGACG00000007446	-	100	75.725	Gasterosteus_aculeatus
ENSCVAG00000015825	-	100	82.091	ENSHBUG00000007997	-	100	82.285	Haplochromis_burtoni
ENSCVAG00000015825	-	85	62.587	ENSHGLG00100000705	ATXN2L	88	64.815	Heterocephalus_glaber_male
ENSCVAG00000015825	-	82	82.879	ENSHCOG00000017587	-	61	82.879	Hippocampus_comes
ENSCVAG00000015825	-	100	58.611	ENSIPUG00000001761	atxn2l	97	57.685	Ictalurus_punctatus
ENSCVAG00000015825	-	100	84.272	ENSKMAG00000021450	-	100	84.757	Kryptolebias_marmoratus
ENSCVAG00000015825	-	100	79.653	ENSLBEG00000022720	-	98	79.942	Labrus_bergylta
ENSCVAG00000015825	-	79	65.414	ENSMFAG00000030590	ATXN2L	60	35.735	Macaca_fascicularis
ENSCVAG00000015825	-	100	79.922	ENSMAMG00000013005	-	98	80.504	Mastacembelus_armatus
ENSCVAG00000015825	-	100	82.188	ENSMZEG00005013869	-	98	82.381	Maylandia_zebra
ENSCVAG00000015825	-	95	72.407	ENSMMOG00000001440	-	99	73.837	Mola_mola
ENSCVAG00000015825	-	84	56.533	ENSMALG00000000334	atxn2l	51	51.103	Monopterus_albus
ENSCVAG00000015825	-	85	77.953	ENSMALG00000008430	-	93	77.953	Monopterus_albus
ENSCVAG00000015825	-	97	42.667	MGP_CAROLIEiJ_G0030450	Atxn2l	77	69.412	Mus_caroli
ENSCVAG00000015825	-	97	42.762	ENSMUSG00000032637	Atxn2l	77	69.412	Mus_musculus
ENSCVAG00000015825	-	97	42.857	MGP_SPRETEiJ_G0031564	Atxn2l	77	69.412	Mus_spretus
ENSCVAG00000015825	-	55	49.225	ENSNLEG00000033414	-	83	49.225	Nomascus_leucogenys
ENSCVAG00000015825	-	50	37.975	ENSMEUG00000011098	ATXN2L	51	34.361	Notamacropus_eugenii
ENSCVAG00000015825	-	100	82.865	ENSONIG00000011478	-	100	82.285	Oreochromis_niloticus
ENSCVAG00000015825	-	100	80.271	ENSORLG00000006059	-	98	79.787	Oryzias_latipes
ENSCVAG00000015825	-	100	79.155	ENSORLG00020000991	-	98	80.077	Oryzias_latipes_hni
ENSCVAG00000015825	-	100	79.155	ENSORLG00015014174	-	98	79.981	Oryzias_latipes_hsok
ENSCVAG00000015825	-	100	79.635	ENSOMEG00000021118	-	98	80.000	Oryzias_melastigma
ENSCVAG00000015825	-	83	56.180	ENSPPAG00000036236	-	67	53.333	Pan_paniscus
ENSCVAG00000015825	-	97	60.612	ENSPKIG00000018462	-	99	61.501	Paramormyrops_kingsleyae
ENSCVAG00000015825	-	72	79.235	ENSPMGG00000014821	-	97	79.058	Periophthalmus_magnuspinnatus
ENSCVAG00000015825	-	100	88.541	ENSPFOG00000005935	-	100	88.932	Poecilia_formosa
ENSCVAG00000015825	-	100	88.443	ENSPLAG00000017094	-	100	88.834	Poecilia_latipinna
ENSCVAG00000015825	-	100	88.541	ENSPMEG00000017227	-	100	88.932	Poecilia_mexicana
ENSCVAG00000015825	-	100	88.737	ENSPREG00000023090	-	100	89.128	Poecilia_reticulata
ENSCVAG00000015825	-	91	35.921	ENSPPYG00000017765	-	54	59.925	Pongo_abelii
ENSCVAG00000015825	-	96	36.721	ENSPVAG00000003958	ATXN2L	75	55.185	Pteropus_vampyrus
ENSCVAG00000015825	-	83	54.213	ENSPNYG00000012482	atxn2l	72	67.164	Pundamilia_nyererei
ENSCVAG00000015825	-	100	82.188	ENSPNYG00000017058	-	98	82.381	Pundamilia_nyererei
ENSCVAG00000015825	-	100	58.708	ENSPNAG00000014538	atxn2l	99	58.357	Pygocentrus_nattereri
ENSCVAG00000015825	-	99	60.401	ENSPNAG00000023685	-	98	59.280	Pygocentrus_nattereri
ENSCVAG00000015825	-	96	39.673	ENSRBIG00000036712	ATXN2L	60	33.483	Rhinopithecus_bieti
ENSCVAG00000015825	-	83	65.283	ENSSBOG00000025782	ATXN2L	71	35.565	Saimiri_boliviensis_boliviensis
ENSCVAG00000015825	-	76	65.640	ENSSFOG00015021588	-	97	64.070	Scleropages_formosus
ENSCVAG00000015825	-	100	56.497	ENSSFOG00015001018	atxn2l	99	55.630	Scleropages_formosus
ENSCVAG00000015825	-	87	54.376	ENSSMAG00000016365	atxn2l	60	46.597	Scophthalmus_maximus
ENSCVAG00000015825	-	100	82.126	ENSSMAG00000016932	-	98	82.705	Scophthalmus_maximus
ENSCVAG00000015825	-	100	84.638	ENSSDUG00000023014	-	100	85.024	Seriola_dumerili
ENSCVAG00000015825	-	84	90.763	ENSSLDG00000017701	-	96	90.763	Seriola_lalandi_dorsalis
ENSCVAG00000015825	-	100	83.237	ENSSPAG00000008174	-	98	83.815	Stegastes_partitus
ENSCVAG00000015825	-	97	43.346	ENSSSCG00000021845	ATXN2L	92	63.953	Sus_scrofa
ENSCVAG00000015825	-	99	80.392	ENSTRUG00000007132	-	98	80.136	Takifugu_rubripes
ENSCVAG00000015825	-	100	77.522	ENSTNIG00000018942	-	100	77.519	Tetraodon_nigroviridis
ENSCVAG00000015825	-	96	40.723	ENSTTRG00000005913	ATXN2L	75	64.815	Tursiops_truncatus
ENSCVAG00000015825	-	96	42.035	ENSUMAG00000009437	ATXN2L	88	52.222	Ursus_maritimus
ENSCVAG00000015825	-	87	57.383	ENSXETG00000014990	atxn2l	93	57.383	Xenopus_tropicalis
ENSCVAG00000015825	-	79	85.533	ENSXCOG00000001128	-	96	84.051	Xiphophorus_couchianus
ENSCVAG00000015825	-	100	87.500	ENSXMAG00000010133	-	100	87.988	Xiphophorus_maculatus