EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000016098 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 2187 bases
Position: chrKL652507.1:1799241-1801427
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000013572	zf-C2H2	PF00096.26	2.5e-62	1	9
ENSCVAP00000013572	zf-C2H2	PF00096.26	2.5e-62	2	9
ENSCVAP00000013572	zf-C2H2	PF00096.26	2.5e-62	3	9
ENSCVAP00000013572	zf-C2H2	PF00096.26	2.5e-62	4	9
ENSCVAP00000013572	zf-C2H2	PF00096.26	2.5e-62	5	9
ENSCVAP00000013572	zf-C2H2	PF00096.26	2.5e-62	6	9
ENSCVAP00000013572	zf-C2H2	PF00096.26	2.5e-62	7	9
ENSCVAP00000013572	zf-C2H2	PF00096.26	2.5e-62	8	9
ENSCVAP00000013572	zf-C2H2	PF00096.26	2.5e-62	9	9
ENSCVAP00000013572	zf-met	PF12874.7	4.1e-11	1	2
ENSCVAP00000013572	zf-met	PF12874.7	4.1e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000021158	-	2187	-	ENSCVAP00000013572	728 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000016098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016098's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000016098	-	98	45.217	ENSCVAG00000012180	-	92	44.545
ENSCVAG00000016098	-	89	38.462	ENSCVAG00000019519	-	68	38.462
ENSCVAG00000016098	-	97	42.473	ENSCVAG00000012228	-	77	37.398
ENSCVAG00000016098	-	96	44.000	ENSCVAG00000016325	znf341	53	44.898
ENSCVAG00000016098	-	98	39.576	ENSCVAG00000006673	-	59	39.576
ENSCVAG00000016098	-	98	38.406	ENSCVAG00000008952	-	92	38.406
ENSCVAG00000016098	-	98	36.364	ENSCVAG00000004388	-	56	36.364
ENSCVAG00000016098	-	98	39.053	ENSCVAG00000015616	-	94	39.053
ENSCVAG00000016098	-	98	38.034	ENSCVAG00000008535	-	71	38.034
ENSCVAG00000016098	-	97	31.557	ENSCVAG00000014404	-	96	31.557
ENSCVAG00000016098	-	99	32.143	ENSCVAG00000005112	-	82	32.143
ENSCVAG00000016098	-	80	40.741	ENSCVAG00000003417	-	63	40.741
ENSCVAG00000016098	-	98	33.990	ENSCVAG00000000144	-	67	33.990
ENSCVAG00000016098	-	98	46.218	ENSCVAG00000017890	-	89	44.211
ENSCVAG00000016098	-	98	38.406	ENSCVAG00000019646	-	80	38.406
ENSCVAG00000016098	-	99	34.597	ENSCVAG00000012284	-	86	44.715
ENSCVAG00000016098	-	98	42.975	ENSCVAG00000004382	-	92	42.975
ENSCVAG00000016098	-	98	41.518	ENSCVAG00000008206	-	87	40.964
ENSCVAG00000016098	-	99	38.315	ENSCVAG00000008200	-	91	38.315
ENSCVAG00000016098	-	98	43.210	ENSCVAG00000006491	-	70	40.239
ENSCVAG00000016098	-	98	38.265	ENSCVAG00000002252	-	96	38.265
ENSCVAG00000016098	-	98	38.129	ENSCVAG00000002307	-	63	38.129
ENSCVAG00000016098	-	55	41.121	ENSCVAG00000006653	-	62	41.121
ENSCVAG00000016098	-	98	43.147	ENSCVAG00000012543	-	99	43.147
ENSCVAG00000016098	-	74	34.286	ENSCVAG00000004222	-	52	34.286
ENSCVAG00000016098	-	99	38.614	ENSCVAG00000009752	-	66	38.614
ENSCVAG00000016098	-	98	37.025	ENSCVAG00000001568	-	81	36.657
ENSCVAG00000016098	-	98	46.903	ENSCVAG00000010442	-	94	38.671
ENSCVAG00000016098	-	97	45.536	ENSCVAG00000000419	-	90	45.536
ENSCVAG00000016098	-	98	37.165	ENSCVAG00000009103	-	87	37.165
ENSCVAG00000016098	-	100	57.296	ENSCVAG00000016092	-	83	57.296
ENSCVAG00000016098	-	91	40.566	ENSCVAG00000001609	-	73	40.566
ENSCVAG00000016098	-	74	40.625	ENSCVAG00000017168	gfi1b	62	40.625
ENSCVAG00000016098	-	99	37.500	ENSCVAG00000018507	-	83	36.585
ENSCVAG00000016098	-	98	38.782	ENSCVAG00000005507	-	100	38.782
ENSCVAG00000016098	-	98	39.672	ENSCVAG00000010160	-	83	39.672
ENSCVAG00000016098	-	98	37.945	ENSCVAG00000007051	-	99	37.945
ENSCVAG00000016098	-	58	43.363	ENSCVAG00000021152	-	54	49.398
ENSCVAG00000016098	-	51	45.455	ENSCVAG00000017005	sall3b	59	45.455
ENSCVAG00000016098	-	82	39.676	ENSCVAG00000012520	-	80	39.676
ENSCVAG00000016098	-	98	41.753	ENSCVAG00000020126	-	72	41.753
ENSCVAG00000016098	-	98	37.281	ENSCVAG00000002295	-	79	34.559
ENSCVAG00000016098	-	99	39.568	ENSCVAG00000003250	-	95	39.568
ENSCVAG00000016098	-	73	36.306	ENSCVAG00000019122	-	100	36.306
ENSCVAG00000016098	-	98	40.081	ENSCVAG00000002833	-	69	40.081
ENSCVAG00000016098	-	98	39.437	ENSCVAG00000004508	-	65	39.437
ENSCVAG00000016098	-	98	40.000	ENSCVAG00000004368	-	72	40.000
ENSCVAG00000016098	-	98	38.565	ENSCVAG00000016898	-	97	38.565
ENSCVAG00000016098	-	98	37.282	ENSCVAG00000008836	-	67	39.490
ENSCVAG00000016098	-	93	40.625	ENSCVAG00000011828	gfi1ab	51	40.625
ENSCVAG00000016098	-	99	36.220	ENSCVAG00000020119	-	71	36.220
ENSCVAG00000016098	-	98	35.230	ENSCVAG00000014622	-	68	35.405
ENSCVAG00000016098	-	96	34.222	ENSCVAG00000018494	-	54	34.222
ENSCVAG00000016098	-	98	42.339	ENSCVAG00000016915	-	51	42.339
ENSCVAG00000016098	-	91	38.860	ENSCVAG00000003630	-	64	38.860
ENSCVAG00000016098	-	99	33.803	ENSCVAG00000004958	-	89	32.117
ENSCVAG00000016098	-	98	43.868	ENSCVAG00000022991	-	99	42.373
ENSCVAG00000016098	-	99	31.438	ENSCVAG00000008327	zbtb41	51	31.438
ENSCVAG00000016098	-	98	40.079	ENSCVAG00000012216	-	82	40.079
ENSCVAG00000016098	-	98	42.857	ENSCVAG00000011213	-	97	42.857
ENSCVAG00000016098	-	99	40.800	ENSCVAG00000016883	-	52	40.800
ENSCVAG00000016098	-	98	37.109	ENSCVAG00000012399	-	89	37.109
ENSCVAG00000016098	-	99	35.017	ENSCVAG00000002488	-	74	35.341
ENSCVAG00000016098	-	63	43.243	ENSCVAG00000012620	-	98	43.243
ENSCVAG00000016098	-	98	33.333	ENSCVAG00000018135	-	89	33.333
ENSCVAG00000016098	-	98	33.333	ENSCVAG00000003433	-	99	33.708
ENSCVAG00000016098	-	93	39.506	ENSCVAG00000003434	-	74	40.299
ENSCVAG00000016098	-	99	39.016	ENSCVAG00000014734	-	91	39.016
ENSCVAG00000016098	-	60	32.278	ENSCVAG00000007684	patz1	52	33.962
ENSCVAG00000016098	-	71	38.650	ENSCVAG00000019705	-	65	38.650
ENSCVAG00000016098	-	74	39.732	ENSCVAG00000017515	-	91	39.732
ENSCVAG00000016098	-	98	38.318	ENSCVAG00000017511	-	94	38.318
ENSCVAG00000016098	-	98	39.013	ENSCVAG00000002305	-	80	39.013
ENSCVAG00000016098	-	99	43.590	ENSCVAG00000020414	-	58	43.590
ENSCVAG00000016098	-	99	39.073	ENSCVAG00000012343	-	95	39.073
ENSCVAG00000016098	-	98	30.889	ENSCVAG00000013692	prdm5	74	30.889
ENSCVAG00000016098	-	97	36.404	ENSCVAG00000016534	-	56	36.404
ENSCVAG00000016098	-	97	39.700	ENSCVAG00000003497	-	86	38.686
ENSCVAG00000016098	-	98	39.474	ENSCVAG00000000227	-	78	39.474
ENSCVAG00000016098	-	98	38.866	ENSCVAG00000019097	-	67	38.866
ENSCVAG00000016098	-	99	41.327	ENSCVAG00000016181	-	96	41.327
ENSCVAG00000016098	-	90	37.445	ENSCVAG00000018485	-	95	37.445
ENSCVAG00000016098	-	95	39.493	ENSCVAG00000019767	-	54	39.493
ENSCVAG00000016098	-	97	39.919	ENSCVAG00000021107	-	96	35.268
ENSCVAG00000016098	-	98	42.623	ENSCVAG00000016796	-	91	40.149
ENSCVAG00000016098	-	99	39.446	ENSCVAG00000019537	-	86	39.446
ENSCVAG00000016098	-	79	48.544	ENSCVAG00000012207	-	91	48.544
ENSCVAG00000016098	-	99	47.917	ENSCVAG00000006667	-	57	47.917
ENSCVAG00000016098	-	98	40.351	ENSCVAG00000011469	-	82	40.351
ENSCVAG00000016098	-	99	45.082	ENSCVAG00000003428	-	99	45.082
ENSCVAG00000016098	-	91	43.382	ENSCVAG00000003396	-	60	43.382
ENSCVAG00000016098	-	98	40.196	ENSCVAG00000007073	-	79	37.643
ENSCVAG00000016098	-	92	36.190	ENSCVAG00000015110	znf526	54	35.359
ENSCVAG00000016098	-	99	42.857	ENSCVAG00000001369	-	74	42.857
ENSCVAG00000016098	-	98	44.355	ENSCVAG00000006389	-	98	38.710
ENSCVAG00000016098	-	98	46.087	ENSCVAG00000001444	-	96	46.087
ENSCVAG00000016098	-	99	44.545	ENSCVAG00000013337	-	92	45.033
ENSCVAG00000016098	-	74	36.245	ENSCVAG00000007169	-	52	36.245
ENSCVAG00000016098	-	98	37.294	ENSCVAG00000002284	-	74	37.294
ENSCVAG00000016098	-	98	40.761	ENSCVAG00000019764	-	73	40.761
ENSCVAG00000016098	-	58	35.484	ENSCVAG00000015597	si:ch211-166g5.4	55	35.484
ENSCVAG00000016098	-	99	36.525	ENSCVAG00000014269	-	97	36.594
ENSCVAG00000016098	-	86	51.754	ENSCVAG00000020155	-	85	51.754
ENSCVAG00000016098	-	98	38.439	ENSCVAG00000001417	-	98	38.439
ENSCVAG00000016098	-	98	38.922	ENSCVAG00000013382	-	66	38.922
ENSCVAG00000016098	-	98	40.678	ENSCVAG00000001767	-	81	40.678
ENSCVAG00000016098	-	98	32.465	ENSCVAG00000012302	-	92	32.465
ENSCVAG00000016098	-	98	40.876	ENSCVAG00000023054	-	58	40.876
ENSCVAG00000016098	-	99	40.171	ENSCVAG00000002500	-	97	40.171
ENSCVAG00000016098	-	98	34.767	ENSCVAG00000000351	-	63	34.520
ENSCVAG00000016098	-	99	38.132	ENSCVAG00000003514	-	77	38.132
ENSCVAG00000016098	-	98	44.275	ENSCVAG00000003512	-	94	44.275
ENSCVAG00000016098	-	99	39.516	ENSCVAG00000009747	-	57	39.516
ENSCVAG00000016098	-	98	40.851	ENSCVAG00000021225	-	93	52.632
ENSCVAG00000016098	-	98	41.111	ENSCVAG00000016964	-	94	40.361
ENSCVAG00000016098	-	95	37.349	ENSCVAG00000002788	e4f1	61	37.179
ENSCVAG00000016098	-	98	40.206	ENSCVAG00000020745	-	96	48.246
ENSCVAG00000016098	-	98	37.811	ENSCVAG00000009827	-	98	37.811
ENSCVAG00000016098	-	99	37.603	ENSCVAG00000009981	-	86	37.603
ENSCVAG00000016098	-	99	41.872	ENSCVAG00000012248	-	92	38.462
ENSCVAG00000016098	-	98	39.058	ENSCVAG00000005494	-	87	39.058
ENSCVAG00000016098	-	98	37.436	ENSCVAG00000018383	-	82	37.436
ENSCVAG00000016098	-	99	35.018	ENSCVAG00000011334	-	86	35.018
ENSCVAG00000016098	-	99	41.935	ENSCVAG00000022174	-	73	41.935
ENSCVAG00000016098	-	98	42.963	ENSCVAG00000014322	-	73	42.963
ENSCVAG00000016098	-	99	39.357	ENSCVAG00000006460	-	75	39.357
ENSCVAG00000016098	-	98	35.593	ENSCVAG00000002242	-	92	37.647
ENSCVAG00000016098	-	98	44.715	ENSCVAG00000015153	-	85	38.978
ENSCVAG00000016098	-	63	36.296	ENSCVAG00000003190	-	64	36.296
ENSCVAG00000016098	-	99	34.375	ENSCVAG00000011235	-	90	34.375
ENSCVAG00000016098	-	99	31.071	ENSCVAG00000009258	znf319b	83	31.786
ENSCVAG00000016098	-	98	38.554	ENSCVAG00000016862	-	99	38.554
ENSCVAG00000016098	-	98	40.476	ENSCVAG00000000423	-	92	40.476
ENSCVAG00000016098	-	63	37.037	ENSCVAG00000009561	scrt1b	58	37.037
ENSCVAG00000016098	-	98	38.571	ENSCVAG00000020938	-	99	38.571
ENSCVAG00000016098	-	99	33.425	ENSCVAG00000003601	ZNF319	86	33.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016098	-	80	37.589	ENSACIG00000017166	-	74	37.589	Amphilophus_citrinellus
ENSCVAG00000016098	-	97	36.214	ENSAPEG00000007889	-	85	36.214	Amphiprion_percula
ENSCVAG00000016098	-	98	37.931	ENSAPEG00000019755	-	92	34.052	Amphiprion_percula
ENSCVAG00000016098	-	56	35.465	ENSAMXG00000032845	-	52	35.465	Astyanax_mexicanus
ENSCVAG00000016098	-	67	33.708	WBGene00021374	Y37E11B.1	93	33.708	Caenorhabditis_elegans
ENSCVAG00000016098	-	96	32.164	ENSCING00000004861	zf(c2h2)-12	76	32.164	Ciona_intestinalis
ENSCVAG00000016098	-	99	32.432	ENSCING00000005713	-	80	32.432	Ciona_intestinalis
ENSCVAG00000016098	-	99	30.909	ENSCING00000000529	zf(btb/c2h2)	58	30.909	Ciona_intestinalis
ENSCVAG00000016098	-	83	31.788	ENSCING00000003384	-	98	30.400	Ciona_intestinalis
ENSCVAG00000016098	-	91	32.544	ENSCSAVG00000006729	-	74	32.544	Ciona_savignyi
ENSCVAG00000016098	-	96	33.333	ENSCSAVG00000005896	-	76	33.333	Ciona_savignyi
ENSCVAG00000016098	-	59	40.952	ENSCSAVG00000003895	-	100	40.952	Ciona_savignyi
ENSCVAG00000016098	-	99	41.259	ENSCSAVG00000009574	-	99	41.259	Ciona_savignyi
ENSCVAG00000016098	-	99	31.472	ENSCSEG00000005491	-	96	31.472	Cynoglossus_semilaevis
ENSCVAG00000016098	-	99	38.333	ENSDARG00000012642	si:ch211-266d19.4	92	38.333	Danio_rerio
ENSCVAG00000016098	-	93	34.286	FBgn0037722	CG8319	61	34.286	Drosophila_melanogaster
ENSCVAG00000016098	-	89	41.379	FBgn0028895	CG17328	57	41.379	Drosophila_melanogaster
ENSCVAG00000016098	-	98	36.364	FBgn0033934	CG17385	82	36.364	Drosophila_melanogaster
ENSCVAG00000016098	-	99	36.585	ENSEBUG00000015522	-	73	36.585	Eptatretus_burgeri
ENSCVAG00000016098	-	98	32.810	ENSEBUG00000008392	-	75	30.108	Eptatretus_burgeri
ENSCVAG00000016098	-	98	35.422	ENSEBUG00000004841	-	86	36.052	Eptatretus_burgeri
ENSCVAG00000016098	-	98	43.094	ENSELUG00000020794	-	59	38.696	Esox_lucius
ENSCVAG00000016098	-	97	37.302	ENSFHEG00000020889	-	75	37.302	Fundulus_heteroclitus
ENSCVAG00000016098	-	100	80.733	ENSFHEG00000003596	-	76	80.733	Fundulus_heteroclitus
ENSCVAG00000016098	-	99	33.803	ENSFHEG00000012990	-	95	33.803	Fundulus_heteroclitus
ENSCVAG00000016098	-	94	37.383	ENSFHEG00000007344	-	56	37.383	Fundulus_heteroclitus
ENSCVAG00000016098	-	98	37.500	ENSFHEG00000013644	-	85	37.367	Fundulus_heteroclitus
ENSCVAG00000016098	-	77	35.870	ENSGACG00000018415	-	99	35.870	Gasterosteus_aculeatus
ENSCVAG00000016098	-	59	36.634	ENSHCOG00000001313	-	57	36.634	Hippocampus_comes
ENSCVAG00000016098	-	99	41.379	ENSHCOG00000014881	-	73	41.379	Hippocampus_comes
ENSCVAG00000016098	-	98	39.645	ENSHCOG00000017437	-	77	39.645	Hippocampus_comes
ENSCVAG00000016098	-	97	34.862	ENSHCOG00000008181	-	76	34.862	Hippocampus_comes
ENSCVAG00000016098	-	50	36.095	ENSIPUG00000009727	-	50	36.095	Ictalurus_punctatus
ENSCVAG00000016098	-	61	30.516	ENSIPUG00000013526	-	93	30.516	Ictalurus_punctatus
ENSCVAG00000016098	-	99	36.570	ENSKMAG00000007658	-	98	34.932	Kryptolebias_marmoratus
ENSCVAG00000016098	-	99	59.558	ENSKMAG00000012909	-	92	50.265	Kryptolebias_marmoratus
ENSCVAG00000016098	-	99	34.943	ENSONIG00000007812	-	99	36.061	Oreochromis_niloticus
ENSCVAG00000016098	-	95	33.654	ENSONIG00000009894	-	100	36.321	Oreochromis_niloticus
ENSCVAG00000016098	-	99	33.235	ENSONIG00000016416	-	98	33.235	Oreochromis_niloticus
ENSCVAG00000016098	-	98	36.810	ENSONIG00000003471	-	100	36.310	Oreochromis_niloticus
ENSCVAG00000016098	-	99	38.389	ENSONIG00000003224	-	99	38.411	Oreochromis_niloticus
ENSCVAG00000016098	-	98	38.272	ENSORLG00015018254	-	96	33.217	Oryzias_latipes_hsok
ENSCVAG00000016098	-	99	34.831	ENSOMEG00000017673	-	77	34.831	Oryzias_melastigma
ENSCVAG00000016098	-	98	41.045	ENSPMGG00000000218	-	58	41.026	Periophthalmus_magnuspinnatus
ENSCVAG00000016098	-	97	37.931	ENSPMGG00000000243	-	79	36.207	Periophthalmus_magnuspinnatus
ENSCVAG00000016098	-	99	36.905	ENSPMGG00000010664	-	91	36.905	Periophthalmus_magnuspinnatus
ENSCVAG00000016098	-	98	36.709	ENSPMGG00000000458	-	94	42.373	Periophthalmus_magnuspinnatus
ENSCVAG00000016098	-	98	44.853	ENSPMGG00000022524	-	94	44.853	Periophthalmus_magnuspinnatus
ENSCVAG00000016098	-	81	38.235	ENSPMGG00000000489	-	80	38.235	Periophthalmus_magnuspinnatus
ENSCVAG00000016098	-	92	31.624	ENSPMGG00000012289	-	70	31.624	Periophthalmus_magnuspinnatus
ENSCVAG00000016098	-	99	35.238	ENSPMGG00000010563	-	81	35.238	Periophthalmus_magnuspinnatus
ENSCVAG00000016098	-	67	36.810	ENSPMGG00000019842	-	72	36.810	Periophthalmus_magnuspinnatus
ENSCVAG00000016098	-	98	34.737	ENSPMAG00000007983	-	98	36.316	Petromyzon_marinus
ENSCVAG00000016098	-	100	33.406	ENSPFOG00000002879	-	99	37.398	Poecilia_formosa
ENSCVAG00000016098	-	78	35.802	ENSPFOG00000020691	-	95	35.971	Poecilia_formosa
ENSCVAG00000016098	-	80	37.952	ENSPLAG00000011254	-	61	37.952	Poecilia_latipinna
ENSCVAG00000016098	-	98	39.552	ENSPLAG00000006174	-	79	39.552	Poecilia_latipinna
ENSCVAG00000016098	-	100	85.967	ENSPMEG00000019229	-	72	85.967	Poecilia_mexicana
ENSCVAG00000016098	-	66	37.349	ENSPMEG00000007503	-	63	37.349	Poecilia_mexicana
ENSCVAG00000016098	-	99	39.545	ENSPMEG00000022676	-	99	39.545	Poecilia_mexicana
ENSCVAG00000016098	-	98	33.425	ENSPREG00000016204	-	68	38.621	Poecilia_reticulata
ENSCVAG00000016098	-	66	35.714	ENSPREG00000015352	-	66	35.714	Poecilia_reticulata
ENSCVAG00000016098	-	100	85.286	ENSPREG00000007146	-	68	85.286	Poecilia_reticulata
ENSCVAG00000016098	-	92	35.632	ENSSMAG00000000404	-	92	35.632	Scophthalmus_maximus
ENSCVAG00000016098	-	99	40.467	ENSSDUG00000000946	-	98	41.270	Seriola_dumerili
ENSCVAG00000016098	-	55	37.063	ENSSLDG00000002515	-	71	37.063	Seriola_lalandi_dorsalis
ENSCVAG00000016098	-	88	41.429	ENSSLDG00000015796	-	93	41.429	Seriola_lalandi_dorsalis
ENSCVAG00000016098	-	72	37.975	ENSSPAG00000009405	-	93	37.975	Stegastes_partitus
ENSCVAG00000016098	-	89	31.343	ENSTRUG00000019941	-	56	31.343	Takifugu_rubripes
ENSCVAG00000016098	-	89	37.895	ENSXCOG00000005697	-	99	37.895	Xiphophorus_couchianus
ENSCVAG00000016098	-	80	37.952	ENSXMAG00000022242	-	77	37.952	Xiphophorus_maculatus