EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000016195 (Gene tree)
Gene ID: 107089739
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 90540 bases
Position: chrKL652763.1:152529-243068
Accession: 107089739
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000028804	ResIII	PF04851.15	3e-06	1	1
ENSCVAP00000028804	BRK	PF07533.16	6.2e-33	1	2
ENSCVAP00000028804	BRK	PF07533.16	6.2e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000021162	-	8625	XM_015382685	ENSCVAP00000028804	2874 (aa)	XP_015238171	-

Gene Model

Click here to download ENSCVAG00000016195's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016195's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000016195	chd9	59	69.194	ENSCVAG00000017584	chd7	63	66.508

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016195	chd9	84	68.854	ENSG00000177200	CHD9	95	70.687	Homo_sapiens
ENSCVAG00000016195	chd9	99	82.501	ENSAPOG00000023034	chd9	95	89.204	Acanthochromis_polyacanthus
ENSCVAG00000016195	chd9	99	61.181	ENSAMEG00000016232	CHD9	85	71.067	Ailuropoda_melanoleuca
ENSCVAG00000016195	chd9	99	78.764	ENSACIG00000004097	chd9	95	78.525	Amphilophus_citrinellus
ENSCVAG00000016195	chd9	99	82.760	ENSAOCG00000005487	chd9	96	90.013	Amphiprion_ocellaris
ENSCVAG00000016195	chd9	99	82.726	ENSAPEG00000009859	chd9	95	89.970	Amphiprion_percula
ENSCVAG00000016195	chd9	99	81.495	ENSATEG00000002748	chd9	97	82.746	Anabas_testudineus
ENSCVAG00000016195	chd9	99	61.546	ENSAPLG00000002826	CHD9	57	76.528	Anas_platyrhynchos
ENSCVAG00000016195	chd9	73	63.857	ENSACAG00000016150	CHD9	89	68.225	Anolis_carolinensis
ENSCVAG00000016195	chd9	73	62.500	ENSANAG00000015630	CHD9	91	69.231	Aotus_nancymaae
ENSCVAG00000016195	chd9	99	79.979	ENSACLG00000016899	chd9	97	80.701	Astatotilapia_calliptera
ENSCVAG00000016195	chd9	99	66.875	ENSAMXG00000005652	chd9	98	76.528	Astyanax_mexicanus
ENSCVAG00000016195	chd9	99	61.083	ENSBTAG00000002287	CHD9	85	70.901	Bos_taurus
ENSCVAG00000016195	chd9	99	60.769	ENSCJAG00000001573	CHD9	91	69.580	Callithrix_jacchus
ENSCVAG00000016195	chd9	73	62.893	ENSCAFG00000009699	CHD9	85	70.905	Canis_familiaris
ENSCVAG00000016195	chd9	73	62.893	ENSCAFG00020002879	CHD9	91	69.655	Canis_lupus_dingo
ENSCVAG00000016195	chd9	96	62.138	ENSCHIG00000021000	CHD9	62	74.486	Capra_hircus
ENSCVAG00000016195	chd9	73	62.052	ENSTSYG00000007693	CHD9	91	68.493	Carlito_syrichta
ENSCVAG00000016195	chd9	66	55.245	ENSCAPG00000011604	CHD9	57	63.780	Cavia_aperea
ENSCVAG00000016195	chd9	73	59.056	ENSCPOG00000036544	CHD9	84	67.299	Cavia_porcellus
ENSCVAG00000016195	chd9	73	62.449	ENSCCAG00000036178	CHD9	91	70.280	Cebus_capucinus
ENSCVAG00000016195	chd9	73	62.483	ENSCATG00000036753	CHD9	91	70.280	Cercocebus_atys
ENSCVAG00000016195	chd9	99	60.576	ENSCLAG00000007137	CHD9	96	80.760	Chinchilla_lanigera
ENSCVAG00000016195	chd9	73	62.438	ENSCSAG00000005311	CHD9	85	70.893	Chlorocebus_sabaeus
ENSCVAG00000016195	chd9	70	82.692	ENSCHOG00000003935	CHD9	53	91.099	Choloepus_hoffmanni
ENSCVAG00000016195	chd9	82	81.691	ENSCPBG00000012459	CHD9	85	80.170	Chrysemys_picta_bellii
ENSCVAG00000016195	chd9	73	62.540	ENSCANG00000030349	CHD9	91	70.280	Colobus_angolensis_palliatus
ENSCVAG00000016195	chd9	99	60.570	ENSCGRG00001016150	Chd9	85	69.450	Cricetulus_griseus_chok1gshd
ENSCVAG00000016195	chd9	99	60.570	ENSCGRG00000012850	Chd9	95	80.572	Cricetulus_griseus_crigri
ENSCVAG00000016195	chd9	97	77.515	ENSCSEG00000009209	chd9	94	83.799	Cynoglossus_semilaevis
ENSCVAG00000016195	chd9	83	75.858	ENSDARG00000074498	chd9	95	76.707	Danio_rerio
ENSCVAG00000016195	chd9	82	69.547	ENSDNOG00000006045	CHD9	97	71.000	Dasypus_novemcinctus
ENSCVAG00000016195	chd9	70	68.452	ENSDORG00000008523	-	96	70.579	Dipodomys_ordii
ENSCVAG00000016195	chd9	88	92.063	ENSETEG00000009565	CHD9	76	92.063	Echinops_telfairi
ENSCVAG00000016195	chd9	88	78.270	ENSEASG00005014832	CHD9	92	81.114	Equus_asinus_asinus
ENSCVAG00000016195	chd9	73	62.652	ENSECAG00000011505	CHD9	85	71.127	Equus_caballus
ENSCVAG00000016195	chd9	80	87.665	ENSEEUG00000014515	CHD9	74	83.978	Erinaceus_europaeus
ENSCVAG00000016195	chd9	88	79.213	ENSELUG00000006031	chd9	95	79.032	Esox_lucius
ENSCVAG00000016195	chd9	73	62.958	ENSFCAG00000022534	CHD9	91	70.000	Felis_catus
ENSCVAG00000016195	chd9	84	69.237	ENSFALG00000013276	CHD9	95	71.002	Ficedula_albicollis
ENSCVAG00000016195	chd9	73	62.360	ENSFDAG00000021037	CHD9	80	70.198	Fukomys_damarensis
ENSCVAG00000016195	chd9	99	87.697	ENSFHEG00000006068	chd9	98	91.680	Fundulus_heteroclitus
ENSCVAG00000016195	chd9	69	87.228	ENSGMOG00000006040	chd9	84	86.626	Gadus_morhua
ENSCVAG00000016195	chd9	99	87.992	ENSGAFG00000010014	chd9	97	92.807	Gambusia_affinis
ENSCVAG00000016195	chd9	73	62.506	ENSGGOG00000014816	CHD9	91	69.930	Gorilla_gorilla
ENSCVAG00000016195	chd9	99	79.472	ENSHBUG00000023322	chd9	94	87.601	Haplochromis_burtoni
ENSCVAG00000016195	chd9	99	61.025	ENSHGLG00000014938	CHD9	96	80.143	Heterocephalus_glaber_female
ENSCVAG00000016195	chd9	97	74.473	ENSHCOG00000000937	chd9	96	82.085	Hippocampus_comes
ENSCVAG00000016195	chd9	83	76.691	ENSIPUG00000016448	chd9	94	77.656	Ictalurus_punctatus
ENSCVAG00000016195	chd9	99	60.611	ENSSTOG00000022273	CHD9	96	80.143	Ictidomys_tridecemlineatus
ENSCVAG00000016195	chd9	97	83.615	ENSKMAG00000016784	chd9	94	89.725	Kryptolebias_marmoratus
ENSCVAG00000016195	chd9	93	81.380	ENSLBEG00000012077	chd9	94	87.083	Labrus_bergylta
ENSCVAG00000016195	chd9	97	58.947	ENSLACG00000005557	CHD9	85	66.472	Latimeria_chalumnae
ENSCVAG00000016195	chd9	99	66.156	ENSLOCG00000007225	chd9	96	77.046	Lepisosteus_oculatus
ENSCVAG00000016195	chd9	73	62.046	ENSLAFG00000015374	CHD9	85	70.253	Loxodonta_africana
ENSCVAG00000016195	chd9	80	69.659	ENSMFAG00000041354	CHD9	95	70.955	Macaca_fascicularis
ENSCVAG00000016195	chd9	73	62.483	ENSMMUG00000016310	CHD9	91	70.280	Macaca_mulatta
ENSCVAG00000016195	chd9	89	61.970	ENSMNEG00000031494	CHD9	86	72.292	Macaca_nemestrina
ENSCVAG00000016195	chd9	73	62.483	ENSMLEG00000043219	CHD9	91	70.280	Mandrillus_leucophaeus
ENSCVAG00000016195	chd9	99	80.549	ENSMAMG00000003909	chd9	97	81.877	Mastacembelus_armatus
ENSCVAG00000016195	chd9	99	79.893	ENSMZEG00005006581	chd9	94	88.481	Maylandia_zebra
ENSCVAG00000016195	chd9	73	62.478	ENSMICG00000016679	CHD9	91	69.521	Microcebus_murinus
ENSCVAG00000016195	chd9	99	76.630	ENSMMOG00000016406	chd9	97	78.440	Mola_mola
ENSCVAG00000016195	chd9	74	65.303	ENSMODG00000013142	-	95	77.477	Monodelphis_domestica
ENSCVAG00000016195	chd9	97	80.230	ENSMALG00000013306	chd9	97	79.685	Monopterus_albus
ENSCVAG00000016195	chd9	97	61.250	MGP_CAROLIEiJ_G0031364	Chd9	84	70.274	Mus_caroli
ENSCVAG00000016195	chd9	87	67.715	ENSMUSG00000056608	Chd9	94	80.751	Mus_musculus
ENSCVAG00000016195	chd9	93	66.130	MGP_PahariEiJ_G0022964	Chd9	84	68.678	Mus_pahari
ENSCVAG00000016195	chd9	93	67.285	MGP_SPRETEiJ_G0032483	Chd9	85	69.724	Mus_spretus
ENSCVAG00000016195	chd9	73	62.996	ENSMPUG00000003285	CHD9	85	70.819	Mustela_putorius_furo
ENSCVAG00000016195	chd9	99	80.552	ENSNBRG00000009423	chd9	94	88.682	Neolamprologus_brichardi
ENSCVAG00000016195	chd9	89	61.757	ENSNLEG00000001026	CHD9	86	72.015	Nomascus_leucogenys
ENSCVAG00000016195	chd9	67	93.985	ENSMEUG00000008222	-	75	91.083	Notamacropus_eugenii
ENSCVAG00000016195	chd9	73	62.152	ENSODEG00000004466	CHD9	85	70.302	Octodon_degus
ENSCVAG00000016195	chd9	83	86.373	ENSONIG00000002816	chd9	96	88.558	Oreochromis_niloticus
ENSCVAG00000016195	chd9	63	72.676	ENSOANG00000013401	CHD9	84	71.749	Ornithorhynchus_anatinus
ENSCVAG00000016195	chd9	84	68.735	ENSOCUG00000001016	CHD9	94	70.928	Oryctolagus_cuniculus
ENSCVAG00000016195	chd9	97	80.491	ENSORLG00000013810	chd9	94	85.793	Oryzias_latipes
ENSCVAG00000016195	chd9	97	80.612	ENSORLG00015019126	chd9	94	87.716	Oryzias_latipes_hsok
ENSCVAG00000016195	chd9	63	77.958	ENSOMEG00000015978	chd9	99	78.796	Oryzias_melastigma
ENSCVAG00000016195	chd9	90	66.485	ENSOGAG00000002110	CHD9	85	70.705	Otolemur_garnettii
ENSCVAG00000016195	chd9	73	62.866	ENSOARG00000017664	CHD9	85	70.682	Ovis_aries
ENSCVAG00000016195	chd9	84	68.032	ENSPPAG00000039388	-	96	70.067	Pan_paniscus
ENSCVAG00000016195	chd9	73	63.003	ENSPPRG00000004801	CHD9	91	70.345	Panthera_pardus
ENSCVAG00000016195	chd9	73	61.737	ENSPTIG00000021854	CHD9	85	69.844	Panthera_tigris_altaica
ENSCVAG00000016195	chd9	73	62.325	ENSPTRG00000008113	CHD9	91	69.930	Pan_troglodytes
ENSCVAG00000016195	chd9	86	66.628	ENSPANG00000019307	CHD9	95	70.549	Papio_anubis
ENSCVAG00000016195	chd9	95	76.020	ENSPKIG00000021876	chd9	94	78.868	Paramormyrops_kingsleyae
ENSCVAG00000016195	chd9	98	62.924	ENSPKIG00000025401	-	98	63.156	Paramormyrops_kingsleyae
ENSCVAG00000016195	chd9	88	61.319	ENSPCIG00000017215	CHD9	89	78.652	Phascolarctos_cinereus
ENSCVAG00000016195	chd9	99	88.245	ENSPFOG00000015839	chd9	99	89.087	Poecilia_formosa
ENSCVAG00000016195	chd9	99	88.354	ENSPLAG00000011118	chd9	97	92.739	Poecilia_latipinna
ENSCVAG00000016195	chd9	99	87.714	ENSPMEG00000015106	chd9	99	88.672	Poecilia_mexicana
ENSCVAG00000016195	chd9	99	88.537	ENSPREG00000006473	chd9	97	92.718	Poecilia_reticulata
ENSCVAG00000016195	chd9	73	62.432	ENSPPYG00000007348	CHD9	85	70.280	Pongo_abelii
ENSCVAG00000016195	chd9	73	80.128	ENSPCAG00000007564	CHD9	75	81.169	Procavia_capensis
ENSCVAG00000016195	chd9	73	60.242	ENSPCOG00000028433	CHD9	91	68.966	Propithecus_coquereli
ENSCVAG00000016195	chd9	84	57.755	ENSPVAG00000015617	CHD9	83	72.971	Pteropus_vampyrus
ENSCVAG00000016195	chd9	99	80.508	ENSPNYG00000010947	chd9	94	88.603	Pundamilia_nyererei
ENSCVAG00000016195	chd9	98	68.560	ENSPNAG00000024141	chd9	96	78.326	Pygocentrus_nattereri
ENSCVAG00000016195	chd9	89	59.985	ENSRNOG00000049302	Chd9	77	80.316	Rattus_norvegicus
ENSCVAG00000016195	chd9	84	68.528	ENSRBIG00000035553	CHD9	96	70.645	Rhinopithecus_bieti
ENSCVAG00000016195	chd9	83	69.231	ENSRROG00000033278	CHD9	96	71.013	Rhinopithecus_roxellana
ENSCVAG00000016195	chd9	99	60.558	ENSSBOG00000030240	CHD9	91	69.580	Saimiri_boliviensis_boliviensis
ENSCVAG00000016195	chd9	97	61.745	ENSSHAG00000002719	CHD9	84	70.988	Sarcophilus_harrisii
ENSCVAG00000016195	chd9	97	68.519	ENSSFOG00015020209	chd9	96	78.422	Scleropages_formosus
ENSCVAG00000016195	chd9	99	65.624	ENSSFOG00015001327	chd9	94	74.545	Scleropages_formosus
ENSCVAG00000016195	chd9	97	80.380	ENSSMAG00000008953	chd9	96	87.933	Scophthalmus_maximus
ENSCVAG00000016195	chd9	99	81.171	ENSSDUG00000006139	chd9	97	88.388	Seriola_dumerili
ENSCVAG00000016195	chd9	99	81.084	ENSSLDG00000017818	chd9	97	88.076	Seriola_lalandi_dorsalis
ENSCVAG00000016195	chd9	70	77.787	ENSSARG00000010632	CHD9	58	78.122	Sorex_araneus
ENSCVAG00000016195	chd9	83	88.112	ENSSPAG00000021649	chd9	95	89.552	Stegastes_partitus
ENSCVAG00000016195	chd9	99	59.987	ENSSSCG00000033591	CHD9	62	75.511	Sus_scrofa
ENSCVAG00000016195	chd9	99	76.965	ENSTRUG00000009125	chd9	97	77.793	Takifugu_rubripes
ENSCVAG00000016195	chd9	57	86.603	ENSTNIG00000003825	chd9	86	86.603	Tetraodon_nigroviridis
ENSCVAG00000016195	chd9	52	94.915	ENSTBEG00000016052	-	63	94.915	Tupaia_belangeri
ENSCVAG00000016195	chd9	86	62.562	ENSTTRG00000012674	CHD9	78	70.862	Tursiops_truncatus
ENSCVAG00000016195	chd9	66	86.164	ENSUMAG00000004043	CHD9	91	86.164	Ursus_maritimus
ENSCVAG00000016195	chd9	70	75.833	ENSVPAG00000001374	CHD9	82	69.789	Vicugna_pacos
ENSCVAG00000016195	chd9	73	62.848	ENSVVUG00000019435	CHD9	85	71.085	Vulpes_vulpes
ENSCVAG00000016195	chd9	92	67.586	ENSXETG00000000349	chd9	81	74.868	Xenopus_tropicalis
ENSCVAG00000016195	chd9	83	91.894	ENSXCOG00000012997	chd9	97	92.349	Xiphophorus_couchianus
ENSCVAG00000016195	chd9	99	88.158	ENSXMAG00000016192	chd9	99	92.562	Xiphophorus_maculatus