EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000016345 (Gene tree)
Gene ID: 107083517
Gene Symbol: ptrhd1
Alias: si:dkey-34f16.5
Full Name: peptidyl-tRNA hydrolase domain containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 457 bases
Position: chrKL652576.1:1108416-1108872
Accession: 107083517
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000013795	PTH2	PF01981.16	3.2e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000021442	-	381	XM_015372824	ENSCVAP00000013795	126 (aa)	XP_015228310	UPI0007425B75

Gene Model

Click here to download ENSCVAG00000016345's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016345	ptrhd1	100	58.268	ENSG00000184924	PTRHD1	90	58.268	Homo_sapiens
ENSCVAG00000016345	ptrhd1	100	93.651	ENSAPOG00000024433	ptrhd1	100	93.651	Acanthochromis_polyacanthus
ENSCVAG00000016345	ptrhd1	100	54.331	ENSAMEG00000002651	PTRHD1	90	54.331	Ailuropoda_melanoleuca
ENSCVAG00000016345	ptrhd1	100	92.857	ENSACIG00000002596	ptrhd1	100	92.857	Amphilophus_citrinellus
ENSCVAG00000016345	ptrhd1	100	93.651	ENSAOCG00000007632	ptrhd1	100	93.651	Amphiprion_ocellaris
ENSCVAG00000016345	ptrhd1	100	93.651	ENSAPEG00000011491	ptrhd1	100	93.651	Amphiprion_percula
ENSCVAG00000016345	ptrhd1	100	89.683	ENSATEG00000019199	ptrhd1	100	89.683	Anabas_testudineus
ENSCVAG00000016345	ptrhd1	100	58.268	ENSANAG00000019089	PTRHD1	90	58.268	Aotus_nancymaae
ENSCVAG00000016345	ptrhd1	100	93.651	ENSACLG00000000814	ptrhd1	100	93.651	Astatotilapia_calliptera
ENSCVAG00000016345	ptrhd1	100	77.953	ENSAMXG00000034266	ptrhd1	88	77.953	Astyanax_mexicanus
ENSCVAG00000016345	ptrhd1	100	61.417	ENSBTAG00000015012	PTRHD1	90	61.417	Bos_taurus
ENSCVAG00000016345	ptrhd1	99	48.800	WBGene00050885	Y94H6A.12	100	48.800	Caenorhabditis_elegans
ENSCVAG00000016345	ptrhd1	100	57.480	ENSCJAG00000008012	PTRHD1	90	57.480	Callithrix_jacchus
ENSCVAG00000016345	ptrhd1	100	56.693	ENSCAFG00000024865	PTRHD1	90	56.693	Canis_familiaris
ENSCVAG00000016345	ptrhd1	100	61.417	ENSCHIG00000014757	PTRHD1	90	61.417	Capra_hircus
ENSCVAG00000016345	ptrhd1	100	57.480	ENSTSYG00000009995	PTRHD1	90	57.480	Carlito_syrichta
ENSCVAG00000016345	ptrhd1	100	58.268	ENSCPOG00000005561	PTRHD1	90	58.268	Cavia_porcellus
ENSCVAG00000016345	ptrhd1	100	58.268	ENSCCAG00000033856	PTRHD1	90	58.268	Cebus_capucinus
ENSCVAG00000016345	ptrhd1	100	58.730	ENSCATG00000033690	PTRHD1	90	58.730	Cercocebus_atys
ENSCVAG00000016345	ptrhd1	100	58.268	ENSCLAG00000006505	PTRHD1	87	58.268	Chinchilla_lanigera
ENSCVAG00000016345	ptrhd1	100	58.268	ENSCSAG00000008490	PTRHD1	90	58.268	Chlorocebus_sabaeus
ENSCVAG00000016345	ptrhd1	100	48.413	ENSCHOG00000001920	PTRHD1	91	48.413	Choloepus_hoffmanni
ENSCVAG00000016345	ptrhd1	100	57.480	ENSCPBG00000022276	PTRHD1	90	57.480	Chrysemys_picta_bellii
ENSCVAG00000016345	ptrhd1	93	56.410	ENSCING00000019647	-	99	56.410	Ciona_intestinalis
ENSCVAG00000016345	ptrhd1	100	58.268	ENSCANG00000034444	PTRHD1	90	58.268	Colobus_angolensis_palliatus
ENSCVAG00000016345	ptrhd1	100	56.693	ENSCGRG00001003289	Ptrhd1	60	56.693	Cricetulus_griseus_chok1gshd
ENSCVAG00000016345	ptrhd1	100	56.693	ENSCGRG00000011834	Ptrhd1	90	56.693	Cricetulus_griseus_crigri
ENSCVAG00000016345	ptrhd1	100	88.189	ENSCSEG00000006943	ptrhd1	100	88.189	Cynoglossus_semilaevis
ENSCVAG00000016345	ptrhd1	100	80.159	ENSDARG00000016122	ptrhd1	100	80.159	Danio_rerio
ENSCVAG00000016345	ptrhd1	100	56.693	ENSDNOG00000043646	PTRHD1	83	56.693	Dasypus_novemcinctus
ENSCVAG00000016345	ptrhd1	100	56.693	ENSDORG00000026776	Ptrhd1	91	56.693	Dipodomys_ordii
ENSCVAG00000016345	ptrhd1	93	62.393	FBgn0038446	CG14903	98	62.393	Drosophila_melanogaster
ENSCVAG00000016345	ptrhd1	53	55.882	ENSETEG00000001615	-	81	55.882	Echinops_telfairi
ENSCVAG00000016345	ptrhd1	96	48.760	ENSETEG00000009379	-	90	48.760	Echinops_telfairi
ENSCVAG00000016345	ptrhd1	93	58.974	ENSEBUG00000002249	ptrhd1	97	58.974	Eptatretus_burgeri
ENSCVAG00000016345	ptrhd1	91	43.103	ENSEASG00005001302	-	82	43.103	Equus_asinus_asinus
ENSCVAG00000016345	ptrhd1	91	42.241	ENSECAG00000005314	-	79	42.241	Equus_caballus
ENSCVAG00000016345	ptrhd1	100	58.268	ENSECAG00000017730	PTRHD1	90	58.268	Equus_caballus
ENSCVAG00000016345	ptrhd1	100	56.693	ENSEEUG00000004263	PTRHD1	90	56.693	Erinaceus_europaeus
ENSCVAG00000016345	ptrhd1	100	80.952	ENSELUG00000003837	ptrhd1	100	80.952	Esox_lucius
ENSCVAG00000016345	ptrhd1	100	55.906	ENSFCAG00000003648	PTRHD1	90	55.906	Felis_catus
ENSCVAG00000016345	ptrhd1	100	59.843	ENSFDAG00000004017	PTRHD1	90	59.843	Fukomys_damarensis
ENSCVAG00000016345	ptrhd1	100	95.238	ENSFHEG00000009135	ptrhd1	100	95.238	Fundulus_heteroclitus
ENSCVAG00000016345	ptrhd1	91	57.391	ENSGALG00000016610	PTRHD1	88	55.645	Gallus_gallus
ENSCVAG00000016345	ptrhd1	100	93.651	ENSGAFG00000005717	ptrhd1	100	93.651	Gambusia_affinis
ENSCVAG00000016345	ptrhd1	99	89.600	ENSGACG00000006743	ptrhd1	98	89.600	Gasterosteus_aculeatus
ENSCVAG00000016345	ptrhd1	100	59.843	ENSGAGG00000023951	PTRHD1	100	59.843	Gopherus_agassizii
ENSCVAG00000016345	ptrhd1	100	57.480	ENSGGOG00000043870	PTRHD1	100	57.480	Gorilla_gorilla
ENSCVAG00000016345	ptrhd1	100	92.857	ENSHBUG00000014289	ptrhd1	100	92.857	Haplochromis_burtoni
ENSCVAG00000016345	ptrhd1	100	60.630	ENSHGLG00000008203	PTRHD1	90	60.630	Heterocephalus_glaber_female
ENSCVAG00000016345	ptrhd1	100	59.055	ENSHGLG00100004341	-	92	59.055	Heterocephalus_glaber_male
ENSCVAG00000016345	ptrhd1	100	59.843	ENSHGLG00100012553	PTRHD1	90	59.843	Heterocephalus_glaber_male
ENSCVAG00000016345	ptrhd1	100	88.976	ENSHCOG00000013504	ptrhd1	100	88.976	Hippocampus_comes
ENSCVAG00000016345	ptrhd1	93	76.923	ENSIPUG00000004885	ptrhd1	98	76.923	Ictalurus_punctatus
ENSCVAG00000016345	ptrhd1	100	58.268	ENSSTOG00000006030	PTRHD1	90	58.268	Ictidomys_tridecemlineatus
ENSCVAG00000016345	ptrhd1	100	59.055	ENSJJAG00000024180	Ptrhd1	91	59.055	Jaculus_jaculus
ENSCVAG00000016345	ptrhd1	89	88.393	ENSKMAG00000016961	ptrhd1	99	88.393	Kryptolebias_marmoratus
ENSCVAG00000016345	ptrhd1	100	89.683	ENSLBEG00000024406	ptrhd1	100	89.683	Labrus_bergylta
ENSCVAG00000016345	ptrhd1	91	69.565	ENSLACG00000018052	PTRHD1	100	66.667	Latimeria_chalumnae
ENSCVAG00000016345	ptrhd1	95	81.667	ENSLOCG00000015890	ptrhd1	94	81.667	Lepisosteus_oculatus
ENSCVAG00000016345	ptrhd1	100	57.480	ENSLAFG00000014453	PTRHD1	90	57.480	Loxodonta_africana
ENSCVAG00000016345	ptrhd1	100	57.480	ENSMFAG00000040267	PTRHD1	90	57.480	Macaca_fascicularis
ENSCVAG00000016345	ptrhd1	100	57.480	ENSMMUG00000009598	PTRHD1	90	57.480	Macaca_mulatta
ENSCVAG00000016345	ptrhd1	100	57.480	ENSMNEG00000035044	PTRHD1	90	57.480	Macaca_nemestrina
ENSCVAG00000016345	ptrhd1	100	57.143	ENSMLEG00000030314	PTRHD1	90	57.143	Mandrillus_leucophaeus
ENSCVAG00000016345	ptrhd1	100	87.302	ENSMAMG00000021201	ptrhd1	100	87.302	Mastacembelus_armatus
ENSCVAG00000016345	ptrhd1	100	93.651	ENSMZEG00005021808	ptrhd1	100	93.651	Maylandia_zebra
ENSCVAG00000016345	ptrhd1	100	58.268	ENSMAUG00000019251	Ptrhd1	90	58.268	Mesocricetus_auratus
ENSCVAG00000016345	ptrhd1	100	59.055	ENSMICG00000001578	PTRHD1	90	59.055	Microcebus_murinus
ENSCVAG00000016345	ptrhd1	100	56.693	ENSMOCG00000001204	Ptrhd1	90	56.693	Microtus_ochrogaster
ENSCVAG00000016345	ptrhd1	100	88.095	ENSMMOG00000015284	ptrhd1	100	88.095	Mola_mola
ENSCVAG00000016345	ptrhd1	95	54.545	ENSMODG00000015895	PTRHD1	89	54.545	Monodelphis_domestica
ENSCVAG00000016345	ptrhd1	100	88.095	ENSMALG00000003471	ptrhd1	100	88.095	Monopterus_albus
ENSCVAG00000016345	ptrhd1	100	56.693	MGP_CAROLIEiJ_G0017582	Ptrhd1	90	56.693	Mus_caroli
ENSCVAG00000016345	ptrhd1	100	56.693	ENSMUSG00000096199	Ptrhd1	90	56.693	Mus_musculus
ENSCVAG00000016345	ptrhd1	100	56.693	MGP_SPRETEiJ_G0018426	Ptrhd1	90	56.693	Mus_spretus
ENSCVAG00000016345	ptrhd1	100	55.906	ENSMPUG00000014016	PTRHD1	90	55.906	Mustela_putorius_furo
ENSCVAG00000016345	ptrhd1	100	55.906	ENSMLUG00000014127	PTRHD1	90	55.906	Myotis_lucifugus
ENSCVAG00000016345	ptrhd1	100	56.693	ENSNGAG00000016335	Ptrhd1	90	56.693	Nannospalax_galili
ENSCVAG00000016345	ptrhd1	100	93.651	ENSNBRG00000009690	ptrhd1	100	93.651	Neolamprologus_brichardi
ENSCVAG00000016345	ptrhd1	100	58.268	ENSNLEG00000000990	PTRHD1	90	58.268	Nomascus_leucogenys
ENSCVAG00000016345	ptrhd1	100	58.268	ENSOPRG00000008600	PTRHD1	90	58.268	Ochotona_princeps
ENSCVAG00000016345	ptrhd1	100	57.480	ENSODEG00000007805	PTRHD1	87	57.480	Octodon_degus
ENSCVAG00000016345	ptrhd1	100	92.857	ENSONIG00000015722	ptrhd1	93	92.857	Oreochromis_niloticus
ENSCVAG00000016345	ptrhd1	100	57.480	ENSOCUG00000015432	PTRHD1	90	57.480	Oryctolagus_cuniculus
ENSCVAG00000016345	ptrhd1	92	81.197	ENSORLG00000028768	ptrhd1	99	81.197	Oryzias_latipes
ENSCVAG00000016345	ptrhd1	92	81.197	ENSORLG00020002857	ptrhd1	99	81.197	Oryzias_latipes_hni
ENSCVAG00000016345	ptrhd1	92	81.197	ENSORLG00015018271	ptrhd1	100	81.197	Oryzias_latipes_hsok
ENSCVAG00000016345	ptrhd1	100	77.165	ENSOMEG00000017594	ptrhd1	100	77.165	Oryzias_melastigma
ENSCVAG00000016345	ptrhd1	100	54.331	ENSOGAG00000000756	PTRHD1	90	54.331	Otolemur_garnettii
ENSCVAG00000016345	ptrhd1	100	61.417	ENSOARG00000018052	PTRHD1	90	61.417	Ovis_aries
ENSCVAG00000016345	ptrhd1	100	58.268	ENSPPAG00000035395	PTRHD1	90	58.268	Pan_paniscus
ENSCVAG00000016345	ptrhd1	100	55.906	ENSPPRG00000022961	PTRHD1	90	55.906	Panthera_pardus
ENSCVAG00000016345	ptrhd1	100	55.906	ENSPTIG00000012136	PTRHD1	90	55.906	Panthera_tigris_altaica
ENSCVAG00000016345	ptrhd1	100	58.268	ENSPTRG00000011716	PTRHD1	90	58.268	Pan_troglodytes
ENSCVAG00000016345	ptrhd1	100	57.480	ENSPANG00000006781	PTRHD1	90	57.480	Papio_anubis
ENSCVAG00000016345	ptrhd1	100	71.429	ENSPKIG00000015207	ptrhd1	86	71.429	Paramormyrops_kingsleyae
ENSCVAG00000016345	ptrhd1	92	92.241	ENSPMGG00000020297	ptrhd1	100	90.476	Periophthalmus_magnuspinnatus
ENSCVAG00000016345	ptrhd1	84	67.925	ENSPMAG00000007352	ptrhd1	93	67.521	Petromyzon_marinus
ENSCVAG00000016345	ptrhd1	91	56.897	ENSPCIG00000025242	PTRHD1	92	56.897	Phascolarctos_cinereus
ENSCVAG00000016345	ptrhd1	100	92.063	ENSPFOG00000004468	ptrhd1	89	92.063	Poecilia_formosa
ENSCVAG00000016345	ptrhd1	100	92.063	ENSPLAG00000018019	ptrhd1	100	92.063	Poecilia_latipinna
ENSCVAG00000016345	ptrhd1	100	92.857	ENSPMEG00000001321	ptrhd1	100	92.857	Poecilia_mexicana
ENSCVAG00000016345	ptrhd1	100	92.857	ENSPREG00000017624	ptrhd1	100	92.857	Poecilia_reticulata
ENSCVAG00000016345	ptrhd1	100	58.268	ENSPPYG00000012597	PTRHD1	90	58.268	Pongo_abelii
ENSCVAG00000016345	ptrhd1	98	56.800	ENSPCAG00000007535	PTRHD1	89	56.800	Procavia_capensis
ENSCVAG00000016345	ptrhd1	100	58.268	ENSPCOG00000003110	PTRHD1	90	58.268	Propithecus_coquereli
ENSCVAG00000016345	ptrhd1	100	58.268	ENSPVAG00000017514	PTRHD1	90	58.268	Pteropus_vampyrus
ENSCVAG00000016345	ptrhd1	100	93.651	ENSPNYG00000016755	ptrhd1	100	93.651	Pundamilia_nyererei
ENSCVAG00000016345	ptrhd1	100	78.740	ENSPNAG00000028214	ptrhd1	100	78.740	Pygocentrus_nattereri
ENSCVAG00000016345	ptrhd1	100	57.480	ENSRNOG00000004059	Ptrhd1	90	57.480	Rattus_norvegicus
ENSCVAG00000016345	ptrhd1	100	58.268	ENSRBIG00000032190	PTRHD1	90	58.268	Rhinopithecus_bieti
ENSCVAG00000016345	ptrhd1	100	58.268	ENSRROG00000029627	PTRHD1	90	58.268	Rhinopithecus_roxellana
ENSCVAG00000016345	ptrhd1	100	57.480	ENSSBOG00000031751	PTRHD1	90	57.480	Saimiri_boliviensis_boliviensis
ENSCVAG00000016345	ptrhd1	91	56.034	ENSSHAG00000005774	PTRHD1	75	56.034	Sarcophilus_harrisii
ENSCVAG00000016345	ptrhd1	96	71.901	ENSSFOG00015000526	ptrhd1	99	71.901	Scleropages_formosus
ENSCVAG00000016345	ptrhd1	92	89.655	ENSSMAG00000004450	ptrhd1	100	86.614	Scophthalmus_maximus
ENSCVAG00000016345	ptrhd1	100	92.063	ENSSDUG00000004610	ptrhd1	85	92.063	Seriola_dumerili
ENSCVAG00000016345	ptrhd1	100	92.063	ENSSLDG00000006231	ptrhd1	100	92.063	Seriola_lalandi_dorsalis
ENSCVAG00000016345	ptrhd1	91	60.345	ENSSPUG00000002905	PTRHD1	95	59.055	Sphenodon_punctatus
ENSCVAG00000016345	ptrhd1	100	92.857	ENSSPAG00000000997	ptrhd1	100	92.857	Stegastes_partitus
ENSCVAG00000016345	ptrhd1	97	47.541	ENSSSCG00000040441	-	92	47.541	Sus_scrofa
ENSCVAG00000016345	ptrhd1	96	54.098	ENSTGUG00000015169	-	89	54.098	Taeniopygia_guttata
ENSCVAG00000016345	ptrhd1	100	86.508	ENSTRUG00000007201	ptrhd1	100	86.508	Takifugu_rubripes
ENSCVAG00000016345	ptrhd1	100	86.508	ENSTNIG00000019143	ptrhd1	100	86.508	Tetraodon_nigroviridis
ENSCVAG00000016345	ptrhd1	100	55.906	ENSTTRG00000015128	PTRHD1	90	55.906	Tursiops_truncatus
ENSCVAG00000016345	ptrhd1	100	55.118	ENSUAMG00000007305	PTRHD1	90	55.118	Ursus_americanus
ENSCVAG00000016345	ptrhd1	100	57.480	ENSVPAG00000005556	PTRHD1	91	57.480	Vicugna_pacos
ENSCVAG00000016345	ptrhd1	90	63.717	ENSXETG00000021176	ptrhd1	88	63.415	Xenopus_tropicalis
ENSCVAG00000016345	ptrhd1	100	93.651	ENSXCOG00000019083	ptrhd1	100	93.651	Xiphophorus_couchianus
ENSCVAG00000016345	ptrhd1	100	93.651	ENSXMAG00000024458	ptrhd1	100	93.651	Xiphophorus_maculatus