EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000016433 (Gene tree)
Gene ID: 107084681
Gene Symbol: p4ha1b
Alias: p4ha1|wu:fc69d06|wu:fi27h11|zgc:56058
Full Name: prolyl 4-hydroxylase subunit alpha 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 15468 bases
Position: chrKL652606.1:732062-747529
Accession: 107084681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000013826	2OG-FeII_Oxy	PF03171.20	1.9e-08	1	1
ENSCVAP00000028957	2OG-FeII_Oxy	PF03171.20	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000021483	-	3551	XM_015374614	ENSCVAP00000013826	547 (aa)	XP_015230100	UPI0007425D56
ENSCVAT00000021478	-	3551	XM_015374613	ENSCVAP00000028957	547 (aa)	XP_015230099	UPI000742810A

Gene Model

Click here to download ENSCVAG00000016433's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016433's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000016433	p4ha1b	98	70.425	ENSCVAG00000020081	p4ha1a	99	69.501
ENSCVAG00000016433	p4ha1b	99	65.000	ENSCVAG00000000703	p4ha2	99	65.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016433	p4ha1b	98	74.164	ENSG00000122884	P4HA1	99	73.234	Homo_sapiens
ENSCVAG00000016433	p4ha1b	99	86.996	ENSAPOG00000005170	p4ha1b	100	86.996	Acanthochromis_polyacanthus
ENSCVAG00000016433	p4ha1b	100	72.943	ENSAMEG00000017009	P4HA1	100	72.212	Ailuropoda_melanoleuca
ENSCVAG00000016433	p4ha1b	99	84.278	ENSACIG00000007255	p4ha1b	100	83.026	Amphilophus_citrinellus
ENSCVAG00000016433	p4ha1b	100	87.614	ENSAOCG00000001647	p4ha1b	100	87.250	Amphiprion_ocellaris
ENSCVAG00000016433	p4ha1b	95	65.067	ENSAPEG00000010402	-	96	64.107	Amphiprion_percula
ENSCVAG00000016433	p4ha1b	100	87.614	ENSAPEG00000005243	p4ha1b	100	87.250	Amphiprion_percula
ENSCVAG00000016433	p4ha1b	100	87.044	ENSATEG00000009272	p4ha1b	100	86.679	Anabas_testudineus
ENSCVAG00000016433	p4ha1b	96	76.190	ENSAPLG00000009284	P4HA1	100	75.810	Anas_platyrhynchos
ENSCVAG00000016433	p4ha1b	96	75.573	ENSACAG00000000564	P4HA1	99	73.567	Anolis_carolinensis
ENSCVAG00000016433	p4ha1b	100	73.492	ENSANAG00000024545	P4HA1	100	72.578	Aotus_nancymaae
ENSCVAG00000016433	p4ha1b	100	85.610	ENSACLG00000021556	p4ha1b	100	87.500	Astatotilapia_calliptera
ENSCVAG00000016433	p4ha1b	99	79.482	ENSAMXG00000011123	p4ha1b	100	78.889	Astyanax_mexicanus
ENSCVAG00000016433	p4ha1b	98	73.881	ENSBTAG00000032996	P4HA1	99	73.134	Bos_taurus
ENSCVAG00000016433	p4ha1b	100	73.492	ENSCJAG00000007429	P4HA1	98	77.733	Callithrix_jacchus
ENSCVAG00000016433	p4ha1b	98	73.881	ENSCAFG00000014573	P4HA1	99	73.134	Canis_familiaris
ENSCVAG00000016433	p4ha1b	99	71.956	ENSCAFG00020023993	P4HA1	98	73.346	Canis_lupus_dingo
ENSCVAG00000016433	p4ha1b	98	73.881	ENSCHIG00000013957	P4HA1	99	73.134	Capra_hircus
ENSCVAG00000016433	p4ha1b	98	74.488	ENSTSYG00000004004	P4HA1	100	79.098	Carlito_syrichta
ENSCVAG00000016433	p4ha1b	98	73.458	ENSCPOG00000015701	P4HA1	99	74.026	Cavia_porcellus
ENSCVAG00000016433	p4ha1b	98	74.164	ENSCATG00000029618	P4HA1	99	73.885	Cercocebus_atys
ENSCVAG00000016433	p4ha1b	98	73.694	ENSCLAG00000017260	P4HA1	99	74.194	Chinchilla_lanigera
ENSCVAG00000016433	p4ha1b	98	74.254	ENSCSAG00000008626	P4HA1	99	73.321	Chlorocebus_sabaeus
ENSCVAG00000016433	p4ha1b	98	75.047	ENSCPBG00000007933	P4HA1	99	74.488	Chrysemys_picta_bellii
ENSCVAG00000016433	p4ha1b	98	74.067	ENSCANG00000033147	P4HA1	99	73.548	Colobus_angolensis_palliatus
ENSCVAG00000016433	p4ha1b	100	72.761	ENSCGRG00001007006	P4ha1	100	72.222	Cricetulus_griseus_chok1gshd
ENSCVAG00000016433	p4ha1b	100	72.761	ENSCGRG00000009371	P4ha1	100	72.222	Cricetulus_griseus_crigri
ENSCVAG00000016433	p4ha1b	99	84.686	ENSCSEG00000004939	p4ha1b	100	84.686	Cynoglossus_semilaevis
ENSCVAG00000016433	p4ha1b	96	79.962	ENSDARG00000071082	p4ha1b	99	79.213	Danio_rerio
ENSCVAG00000016433	p4ha1b	95	47.388	ENSDARG00000017038	zgc:152670	98	51.709	Danio_rerio
ENSCVAG00000016433	p4ha1b	99	72.376	ENSDNOG00000013665	P4HA1	93	72.420	Dasypus_novemcinctus
ENSCVAG00000016433	p4ha1b	98	74.302	ENSDORG00000003405	P4ha1	99	75.000	Dipodomys_ordii
ENSCVAG00000016433	p4ha1b	97	60.829	ENSEBUG00000005379	p4ha1b	98	60.264	Eptatretus_burgeri
ENSCVAG00000016433	p4ha1b	95	74.374	ENSEASG00005016606	P4HA1	99	74.359	Equus_asinus_asinus
ENSCVAG00000016433	p4ha1b	98	73.184	ENSECAG00000012496	P4HA1	99	74.319	Equus_caballus
ENSCVAG00000016433	p4ha1b	81	78.986	ENSEEUG00000005542	P4HA1	82	78.986	Erinaceus_europaeus
ENSCVAG00000016433	p4ha1b	99	77.656	ENSELUG00000005913	p4ha1b	99	78.058	Esox_lucius
ENSCVAG00000016433	p4ha1b	98	74.349	ENSFCAG00000018673	P4HA1	99	73.606	Felis_catus
ENSCVAG00000016433	p4ha1b	99	75.000	ENSFALG00000012773	P4HA1	98	74.630	Ficedula_albicollis
ENSCVAG00000016433	p4ha1b	98	67.103	ENSFDAG00000007094	P4HA1	99	66.355	Fukomys_damarensis
ENSCVAG00000016433	p4ha1b	100	90.942	ENSFHEG00000022856	p4ha1b	100	90.580	Fundulus_heteroclitus
ENSCVAG00000016433	p4ha1b	94	78.654	ENSGMOG00000018948	p4ha1b	100	78.035	Gadus_morhua
ENSCVAG00000016433	p4ha1b	98	75.233	ENSGALG00000004325	P4HA1	99	74.860	Gallus_gallus
ENSCVAG00000016433	p4ha1b	100	91.971	ENSGAFG00000019818	p4ha1b	100	91.788	Gambusia_affinis
ENSCVAG00000016433	p4ha1b	96	84.250	ENSGACG00000010233	p4ha1b	99	83.919	Gasterosteus_aculeatus
ENSCVAG00000016433	p4ha1b	98	74.164	ENSGGOG00000015551	P4HA1	99	73.885	Gorilla_gorilla
ENSCVAG00000016433	p4ha1b	100	85.610	ENSHBUG00000015524	p4ha1b	100	85.428	Haplochromis_burtoni
ENSCVAG00000016433	p4ha1b	100	72.395	ENSHGLG00000011764	P4HA1	100	72.222	Heterocephalus_glaber_female
ENSCVAG00000016433	p4ha1b	94	85.853	ENSHCOG00000017152	p4ha1b	100	84.884	Hippocampus_comes
ENSCVAG00000016433	p4ha1b	96	78.817	ENSIPUG00000015157	P4HA1	100	76.852	Ictalurus_punctatus
ENSCVAG00000016433	p4ha1b	100	73.126	ENSSTOG00000027062	P4HA1	100	72.549	Ictidomys_tridecemlineatus
ENSCVAG00000016433	p4ha1b	98	74.206	ENSJJAG00000004232	P4ha1	98	75.325	Jaculus_jaculus
ENSCVAG00000016433	p4ha1b	96	91.667	ENSKMAG00000001588	p4ha1b	100	91.209	Kryptolebias_marmoratus
ENSCVAG00000016433	p4ha1b	100	88.139	ENSLBEG00000018911	p4ha1b	100	87.774	Labrus_bergylta
ENSCVAG00000016433	p4ha1b	96	75.665	ENSLACG00000010202	P4HA1	99	73.840	Latimeria_chalumnae
ENSCVAG00000016433	p4ha1b	99	77.982	ENSLOCG00000008546	p4ha1b	99	78.125	Lepisosteus_oculatus
ENSCVAG00000016433	p4ha1b	98	74.115	ENSLAFG00000002652	P4HA1	99	73.557	Loxodonta_africana
ENSCVAG00000016433	p4ha1b	98	74.164	ENSMFAG00000030507	P4HA1	99	73.885	Macaca_fascicularis
ENSCVAG00000016433	p4ha1b	98	71.004	ENSMMUG00000011274	P4HA1	99	73.885	Macaca_mulatta
ENSCVAG00000016433	p4ha1b	98	72.388	ENSMNEG00000011433	P4HA1	97	73.010	Macaca_nemestrina
ENSCVAG00000016433	p4ha1b	94	70.291	ENSMLEG00000043338	P4HA1	100	81.148	Mandrillus_leucophaeus
ENSCVAG00000016433	p4ha1b	99	88.745	ENSMAMG00000015854	p4ha1b	100	88.745	Mastacembelus_armatus
ENSCVAG00000016433	p4ha1b	100	85.792	ENSMZEG00005027421	p4ha1b	100	85.610	Maylandia_zebra
ENSCVAG00000016433	p4ha1b	98	74.768	ENSMGAG00000005554	P4HA1	100	75.908	Meleagris_gallopavo
ENSCVAG00000016433	p4ha1b	100	58.684	ENSMAUG00000011056	P4ha1	97	65.686	Mesocricetus_auratus
ENSCVAG00000016433	p4ha1b	100	73.492	ENSMICG00000031365	P4HA1	100	72.222	Microcebus_murinus
ENSCVAG00000016433	p4ha1b	100	72.395	ENSMOCG00000017531	P4ha1	100	71.895	Microtus_ochrogaster
ENSCVAG00000016433	p4ha1b	96	87.238	ENSMMOG00000008022	p4ha1b	100	87.109	Mola_mola
ENSCVAG00000016433	p4ha1b	98	75.419	ENSMODG00000000121	P4HA1	99	75.419	Monodelphis_domestica
ENSCVAG00000016433	p4ha1b	100	88.321	ENSMALG00000019674	p4ha1b	100	88.504	Monopterus_albus
ENSCVAG00000016433	p4ha1b	100	71.846	MGP_CAROLIEiJ_G0015342	P4ha1	100	72.222	Mus_caroli
ENSCVAG00000016433	p4ha1b	100	72.029	ENSMUSG00000019916	P4ha1	100	72.222	Mus_musculus
ENSCVAG00000016433	p4ha1b	100	72.395	MGP_PahariEiJ_G0030758	P4ha1	99	73.377	Mus_pahari
ENSCVAG00000016433	p4ha1b	100	72.029	MGP_SPRETEiJ_G0016153	P4ha1	100	72.222	Mus_spretus
ENSCVAG00000016433	p4ha1b	100	73.492	ENSMPUG00000003940	P4HA1	100	72.761	Mustela_putorius_furo
ENSCVAG00000016433	p4ha1b	98	73.420	ENSMLUG00000006548	P4HA1	99	72.677	Myotis_lucifugus
ENSCVAG00000016433	p4ha1b	100	73.126	ENSNGAG00000014487	P4ha1	100	72.222	Nannospalax_galili
ENSCVAG00000016433	p4ha1b	96	85.009	ENSNBRG00000014791	p4ha1b	100	83.789	Neolamprologus_brichardi
ENSCVAG00000016433	p4ha1b	98	65.428	ENSNLEG00000035416	P4HA1	99	78.838	Nomascus_leucogenys
ENSCVAG00000016433	p4ha1b	90	67.617	ENSMEUG00000010326	P4HA1	95	67.413	Notamacropus_eugenii
ENSCVAG00000016433	p4ha1b	100	64.351	ENSOPRG00000000990	P4HA1	100	64.351	Ochotona_princeps
ENSCVAG00000016433	p4ha1b	84	74.194	ENSODEG00000015164	P4HA1	99	74.194	Octodon_degus
ENSCVAG00000016433	p4ha1b	100	85.662	ENSONIG00000000737	p4ha1b	90	84.755	Oreochromis_niloticus
ENSCVAG00000016433	p4ha1b	79	75.520	ENSOANG00000001125	-	100	75.231	Ornithorhynchus_anatinus
ENSCVAG00000016433	p4ha1b	100	72.395	ENSOCUG00000009739	P4HA1	100	71.664	Oryctolagus_cuniculus
ENSCVAG00000016433	p4ha1b	96	86.528	ENSORLG00000005147	p4ha1b	100	86.047	Oryzias_latipes
ENSCVAG00000016433	p4ha1b	100	86.000	ENSORLG00020010911	p4ha1b	100	85.636	Oryzias_latipes_hni
ENSCVAG00000016433	p4ha1b	88	86.008	ENSORLG00015016175	p4ha1b	99	83.197	Oryzias_latipes_hsok
ENSCVAG00000016433	p4ha1b	96	87.452	ENSOMEG00000009962	p4ha1b	100	87.132	Oryzias_melastigma
ENSCVAG00000016433	p4ha1b	98	73.420	ENSOGAG00000003483	P4HA1	99	72.491	Otolemur_garnettii
ENSCVAG00000016433	p4ha1b	98	73.881	ENSOARG00000007348	P4HA1	99	73.134	Ovis_aries
ENSCVAG00000016433	p4ha1b	98	68.392	ENSPPAG00000030135	P4HA1	100	81.148	Pan_paniscus
ENSCVAG00000016433	p4ha1b	98	74.164	ENSPPRG00000002655	P4HA1	99	73.606	Panthera_pardus
ENSCVAG00000016433	p4ha1b	98	74.164	ENSPTIG00000007711	P4HA1	99	73.606	Panthera_tigris_altaica
ENSCVAG00000016433	p4ha1b	98	69.331	ENSPTRG00000002619	P4HA1	99	73.885	Pan_troglodytes
ENSCVAG00000016433	p4ha1b	98	74.164	ENSPANG00000022355	P4HA1	99	73.885	Papio_anubis
ENSCVAG00000016433	p4ha1b	99	79.705	ENSPKIG00000000438	p4ha1b	99	78.704	Paramormyrops_kingsleyae
ENSCVAG00000016433	p4ha1b	98	75.605	ENSPSIG00000016298	P4HA1	99	74.674	Pelodiscus_sinensis
ENSCVAG00000016433	p4ha1b	99	82.472	ENSPMGG00000007593	p4ha1b	100	82.288	Periophthalmus_magnuspinnatus
ENSCVAG00000016433	p4ha1b	100	72.029	ENSPEMG00000006561	P4ha1	100	71.895	Peromyscus_maniculatus_bairdii
ENSCVAG00000016433	p4ha1b	98	75.093	ENSPCIG00000018768	P4HA1	99	74.860	Phascolarctos_cinereus
ENSCVAG00000016433	p4ha1b	100	92.883	ENSPFOG00000018574	p4ha1b	100	92.701	Poecilia_formosa
ENSCVAG00000016433	p4ha1b	100	92.701	ENSPLAG00000012628	p4ha1b	100	95.652	Poecilia_latipinna
ENSCVAG00000016433	p4ha1b	100	92.883	ENSPMEG00000024082	p4ha1b	100	92.701	Poecilia_mexicana
ENSCVAG00000016433	p4ha1b	100	92.701	ENSPREG00000010003	p4ha1b	100	92.336	Poecilia_reticulata
ENSCVAG00000016433	p4ha1b	98	74.164	ENSPPYG00000002348	P4HA1	99	73.234	Pongo_abelii
ENSCVAG00000016433	p4ha1b	94	67.510	ENSPCOG00000017553	P4HA1	100	81.557	Propithecus_coquereli
ENSCVAG00000016433	p4ha1b	98	67.412	ENSPVAG00000012989	P4HA1	99	66.480	Pteropus_vampyrus
ENSCVAG00000016433	p4ha1b	100	85.610	ENSPNYG00000002443	p4ha1b	100	85.428	Pundamilia_nyererei
ENSCVAG00000016433	p4ha1b	98	80.597	ENSPNAG00000023149	p4ha1b	99	80.597	Pygocentrus_nattereri
ENSCVAG00000016433	p4ha1b	98	73.645	ENSRNOG00000050655	P4ha1	99	72.710	Rattus_norvegicus
ENSCVAG00000016433	p4ha1b	98	66.543	ENSRBIG00000035304	P4HA1	99	86.286	Rhinopithecus_bieti
ENSCVAG00000016433	p4ha1b	98	74.164	ENSRROG00000044078	P4HA1	99	73.885	Rhinopithecus_roxellana
ENSCVAG00000016433	p4ha1b	71	72.564	ENSSHAG00000008056	P4HA1	100	72.494	Sarcophilus_harrisii
ENSCVAG00000016433	p4ha1b	98	80.074	ENSSFOG00015009176	p4ha1b	100	80.702	Scleropages_formosus
ENSCVAG00000016433	p4ha1b	99	86.556	ENSSMAG00000019199	p4ha1b	100	86.372	Scophthalmus_maximus
ENSCVAG00000016433	p4ha1b	100	88.139	ENSSDUG00000016587	p4ha1b	100	88.139	Seriola_dumerili
ENSCVAG00000016433	p4ha1b	100	88.504	ENSSLDG00000016261	p4ha1b	100	88.504	Seriola_lalandi_dorsalis
ENSCVAG00000016433	p4ha1b	100	70.018	ENSSARG00000003275	P4HA1	100	69.104	Sorex_araneus
ENSCVAG00000016433	p4ha1b	96	75.382	ENSSPUG00000002624	P4HA1	99	74.302	Sphenodon_punctatus
ENSCVAG00000016433	p4ha1b	85	86.076	ENSSPAG00000011193	p4ha1b	100	85.501	Stegastes_partitus
ENSCVAG00000016433	p4ha1b	100	72.943	ENSSSCG00000010292	P4HA1	100	72.029	Sus_scrofa
ENSCVAG00000016433	p4ha1b	99	75.000	ENSTGUG00000004364	-	99	74.630	Taeniopygia_guttata
ENSCVAG00000016433	p4ha1b	98	85.505	ENSTRUG00000004081	p4ha1b	99	85.478	Takifugu_rubripes
ENSCVAG00000016433	p4ha1b	99	84.686	ENSTNIG00000017021	p4ha1b	100	84.502	Tetraodon_nigroviridis
ENSCVAG00000016433	p4ha1b	100	72.029	ENSTTRG00000009782	P4HA1	100	71.115	Tursiops_truncatus
ENSCVAG00000016433	p4ha1b	100	73.492	ENSUMAG00000009024	P4HA1	100	72.761	Ursus_maritimus
ENSCVAG00000016433	p4ha1b	98	65.736	ENSVPAG00000007253	P4HA1	99	64.804	Vicugna_pacos
ENSCVAG00000016433	p4ha1b	98	73.881	ENSVVUG00000022660	P4HA1	99	73.134	Vulpes_vulpes
ENSCVAG00000016433	p4ha1b	99	69.835	ENSXETG00000006154	p4ha1	99	68.556	Xenopus_tropicalis
ENSCVAG00000016433	p4ha1b	96	91.856	ENSXCOG00000010262	p4ha1b	100	90.476	Xiphophorus_couchianus
ENSCVAG00000016433	p4ha1b	100	91.956	ENSXMAG00000003889	p4ha1b	100	91.042	Xiphophorus_maculatus