EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000016494 (Gene tree)
Gene ID: 107093691
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 40105 bases
Position: chrKL652940.1:675015-715119
Accession: 107093691
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000028943	DZF	PF07528.14	5.8e-73	1	1
ENSCVAP00000028956	DZF	PF07528.14	6.3e-73	1	1
ENSCVAP00000028951	DZF	PF07528.14	6.3e-73	1	1
ENSCVAP00000013820	DZF	PF07528.14	6.3e-73	1	1
ENSCVAP00000028943	zf-met	PF12874.7	2e-21	1	3
ENSCVAP00000028943	zf-met	PF12874.7	2e-21	2	3
ENSCVAP00000028943	zf-met	PF12874.7	2e-21	3	3
ENSCVAP00000013820	zf-met	PF12874.7	2.4e-21	1	3
ENSCVAP00000013820	zf-met	PF12874.7	2.4e-21	2	3
ENSCVAP00000013820	zf-met	PF12874.7	2.4e-21	3	3
ENSCVAP00000028956	zf-met	PF12874.7	2.4e-21	1	3
ENSCVAP00000028956	zf-met	PF12874.7	2.4e-21	2	3
ENSCVAP00000028956	zf-met	PF12874.7	2.4e-21	3	3
ENSCVAP00000028951	zf-met	PF12874.7	2.4e-21	1	3
ENSCVAP00000028951	zf-met	PF12874.7	2.4e-21	2	3
ENSCVAP00000028951	zf-met	PF12874.7	2.4e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000021477	-	4428	-	ENSCVAP00000013820	1043 (aa)	-	-
ENSCVAT00000030861	-	4255	-	ENSCVAP00000028951	1042 (aa)	-	-
ENSCVAT00000021470	-	4231	-	ENSCVAP00000028956	1042 (aa)	-	-
ENSCVAT00000021446	-	2979	XM_015388894	ENSCVAP00000028943	992 (aa)	XP_015244380	-

Gene Model

Click here to download ENSCVAG00000016494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000016494	zfr	97	56.266	ENSCVAG00000022133	zfr2	99	52.590

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016494	zfr	100	73.302	ENSG00000056097	ZFR	98	75.024	Homo_sapiens
ENSCVAG00000016494	zfr	100	78.957	ENSAPOG00000009740	zfr	94	87.895	Acanthochromis_polyacanthus
ENSCVAG00000016494	zfr	100	73.446	ENSAMEG00000006184	ZFR	98	74.976	Ailuropoda_melanoleuca
ENSCVAG00000016494	zfr	100	86.114	ENSACIG00000015926	zfr	99	86.214	Amphilophus_citrinellus
ENSCVAG00000016494	zfr	100	82.008	ENSAOCG00000013876	zfr	94	88.421	Amphiprion_ocellaris
ENSCVAG00000016494	zfr	100	85.322	ENSAPEG00000024383	zfr	98	86.174	Amphiprion_percula
ENSCVAG00000016494	zfr	100	86.407	ENSATEG00000010271	zfr	98	87.357	Anabas_testudineus
ENSCVAG00000016494	zfr	80	67.303	ENSAPLG00000015627	-	100	69.845	Anas_platyrhynchos
ENSCVAG00000016494	zfr	100	71.536	ENSACAG00000007880	ZFR	98	73.102	Anolis_carolinensis
ENSCVAG00000016494	zfr	100	73.208	ENSANAG00000023333	ZFR	98	74.929	Aotus_nancymaae
ENSCVAG00000016494	zfr	100	85.514	ENSACLG00000016832	zfr	99	85.814	Astatotilapia_calliptera
ENSCVAG00000016494	zfr	99	80.377	ENSAMXG00000019511	zfr	99	81.321	Astyanax_mexicanus
ENSCVAG00000016494	zfr	100	73.635	ENSBTAG00000008414	ZFR	98	75.165	Bos_taurus
ENSCVAG00000016494	zfr	100	73.538	ENSCJAG00000018740	ZFR	99	75.347	Callithrix_jacchus
ENSCVAG00000016494	zfr	100	71.362	ENSCAFG00000018886	ZFR	98	74.639	Canis_familiaris
ENSCVAG00000016494	zfr	100	73.887	ENSCAFG00020016859	-	99	75.494	Canis_lupus_dingo
ENSCVAG00000016494	zfr	100	73.635	ENSCHIG00000007710	ZFR	98	75.165	Capra_hircus
ENSCVAG00000016494	zfr	99	73.269	ENSTSYG00000010670	ZFR	99	74.403	Carlito_syrichta
ENSCVAG00000016494	zfr	98	60.680	ENSCAPG00000015655	ZFR	99	58.932	Cavia_aperea
ENSCVAG00000016494	zfr	98	67.826	ENSCPOG00000000862	ZFR	99	69.565	Cavia_porcellus
ENSCVAG00000016494	zfr	100	73.283	ENSCCAG00000024473	ZFR	99	74.929	Cebus_capucinus
ENSCVAG00000016494	zfr	100	73.208	ENSCATG00000038311	ZFR	99	74.929	Cercocebus_atys
ENSCVAG00000016494	zfr	99	72.945	ENSCLAG00000007408	ZFR	99	74.807	Chinchilla_lanigera
ENSCVAG00000016494	zfr	100	73.208	ENSCSAG00000017180	ZFR	98	74.929	Chlorocebus_sabaeus
ENSCVAG00000016494	zfr	91	65.556	ENSCHOG00000003848	ZFR	87	74.468	Choloepus_hoffmanni
ENSCVAG00000016494	zfr	100	73.913	ENSCPBG00000024211	ZFR	98	75.449	Chrysemys_picta_bellii
ENSCVAG00000016494	zfr	100	73.396	ENSCANG00000017807	ZFR	99	75.118	Colobus_angolensis_palliatus
ENSCVAG00000016494	zfr	100	73.377	ENSCGRG00001016009	Zfr	98	75.000	Cricetulus_griseus_chok1gshd
ENSCVAG00000016494	zfr	99	72.934	ENSCGRG00000001228	Zfr	98	74.288	Cricetulus_griseus_crigri
ENSCVAG00000016494	zfr	100	83.267	ENSCSEG00000009224	zfr	100	84.163	Cynoglossus_semilaevis
ENSCVAG00000016494	zfr	100	82.180	ENSCSEG00000011169	ZFR	93	88.398	Cynoglossus_semilaevis
ENSCVAG00000016494	zfr	99	79.490	ENSDARG00000027109	zfr	99	80.283	Danio_rerio
ENSCVAG00000016494	zfr	100	73.070	ENSDNOG00000008852	ZFR	98	74.694	Dasypus_novemcinctus
ENSCVAG00000016494	zfr	100	73.070	ENSDORG00000016643	Zfr	98	74.859	Dipodomys_ordii
ENSCVAG00000016494	zfr	100	69.565	ENSETEG00000008937	ZFR	98	71.145	Echinops_telfairi
ENSCVAG00000016494	zfr	54	59.927	ENSEBUG00000012503	-	96	59.528	Eptatretus_burgeri
ENSCVAG00000016494	zfr	100	73.540	ENSEASG00005007104	ZFR	98	75.071	Equus_asinus_asinus
ENSCVAG00000016494	zfr	81	70.968	ENSECAG00000012851	ZFR	97	72.842	Equus_caballus
ENSCVAG00000016494	zfr	83	72.973	ENSEEUG00000014206	ZFR	79	76.404	Erinaceus_europaeus
ENSCVAG00000016494	zfr	100	69.374	ENSELUG00000022743	zfr	99	67.787	Esox_lucius
ENSCVAG00000016494	zfr	100	73.540	ENSFCAG00000000354	ZFR	98	75.071	Felis_catus
ENSCVAG00000016494	zfr	100	73.384	ENSFALG00000002149	ZFR	98	75.309	Ficedula_albicollis
ENSCVAG00000016494	zfr	100	73.283	ENSFDAG00000012993	ZFR	99	74.812	Fukomys_damarensis
ENSCVAG00000016494	zfr	62	83.987	ENSFHEG00000012064	zfr	100	80.395	Fundulus_heteroclitus
ENSCVAG00000016494	zfr	99	72.512	ENSGMOG00000003967	zfr	91	90.000	Gadus_morhua
ENSCVAG00000016494	zfr	100	74.456	ENSGALG00000003235	-	98	76.348	Gallus_gallus
ENSCVAG00000016494	zfr	100	75.614	ENSGALG00000034488	-	98	75.473	Gallus_gallus
ENSCVAG00000016494	zfr	89	94.574	ENSGAFG00000016229	zfr	96	94.574	Gambusia_affinis
ENSCVAG00000016494	zfr	99	83.028	ENSGACG00000005045	zfr	99	82.044	Gasterosteus_aculeatus
ENSCVAG00000016494	zfr	94	73.100	ENSGAGG00000013544	ZFR	98	74.082	Gopherus_agassizii
ENSCVAG00000016494	zfr	100	73.396	ENSGGOG00000016302	ZFR	99	74.335	Gorilla_gorilla
ENSCVAG00000016494	zfr	100	73.302	ENSHGLG00000008088	ZFR	98	74.835	Heterocephalus_glaber_female
ENSCVAG00000016494	zfr	99	73.129	ENSHGLG00100016776	ZFR	99	74.952	Heterocephalus_glaber_male
ENSCVAG00000016494	zfr	100	81.380	ENSHCOG00000001548	zfr	98	81.758	Hippocampus_comes
ENSCVAG00000016494	zfr	99	80.872	ENSIPUG00000008192	zfr	98	81.391	Ictalurus_punctatus
ENSCVAG00000016494	zfr	100	73.245	ENSSTOG00000008742	ZFR	98	74.692	Ictidomys_tridecemlineatus
ENSCVAG00000016494	zfr	99	69.356	ENSJJAG00000023064	Zfr	98	70.392	Jaculus_jaculus
ENSCVAG00000016494	zfr	91	84.495	ENSKMAG00000009468	zfr	97	86.160	Kryptolebias_marmoratus
ENSCVAG00000016494	zfr	99	83.491	ENSLBEG00000010783	zfr	98	83.302	Labrus_bergylta
ENSCVAG00000016494	zfr	100	73.521	ENSLACG00000000831	ZFR	98	72.795	Latimeria_chalumnae
ENSCVAG00000016494	zfr	100	78.031	ENSLOCG00000006727	zfr	98	78.651	Lepisosteus_oculatus
ENSCVAG00000016494	zfr	100	73.421	ENSLAFG00000002308	ZFR	99	75.235	Loxodonta_africana
ENSCVAG00000016494	zfr	100	73.208	ENSMFAG00000042691	ZFR	99	74.929	Macaca_fascicularis
ENSCVAG00000016494	zfr	100	73.208	ENSMMUG00000001317	ZFR	98	74.929	Macaca_mulatta
ENSCVAG00000016494	zfr	100	73.208	ENSMNEG00000029441	ZFR	99	74.929	Macaca_nemestrina
ENSCVAG00000016494	zfr	99	73.340	ENSMLEG00000028503	ZFR	99	75.217	Mandrillus_leucophaeus
ENSCVAG00000016494	zfr	100	85.280	ENSMAMG00000017351	zfr	99	84.431	Mastacembelus_armatus
ENSCVAG00000016494	zfr	100	85.514	ENSMZEG00005021243	zfr	99	85.814	Maylandia_zebra
ENSCVAG00000016494	zfr	98	62.835	ENSMGAG00000002841	ZFR	99	63.359	Meleagris_gallopavo
ENSCVAG00000016494	zfr	100	74.624	ENSMAUG00000000976	Zfr	98	74.718	Mesocricetus_auratus
ENSCVAG00000016494	zfr	100	73.113	ENSMICG00000001244	ZFR	98	74.552	Microcebus_murinus
ENSCVAG00000016494	zfr	100	73.302	ENSMOCG00000018630	Zfr	98	75.118	Microtus_ochrogaster
ENSCVAG00000016494	zfr	100	79.167	ENSMMOG00000012585	zfr	84	98.387	Mola_mola
ENSCVAG00000016494	zfr	100	73.315	ENSMODG00000020412	ZFR	98	75.353	Monodelphis_domestica
ENSCVAG00000016494	zfr	100	81.214	ENSMALG00000007123	zfr	95	96.774	Monopterus_albus
ENSCVAG00000016494	zfr	100	73.471	MGP_CAROLIEiJ_G0019681	Zfr	100	78.188	Mus_caroli
ENSCVAG00000016494	zfr	100	73.754	ENSMUSG00000022201	Zfr	99	78.188	Mus_musculus
ENSCVAG00000016494	zfr	100	73.565	MGP_PahariEiJ_G0016057	Zfr	100	77.852	Mus_pahari
ENSCVAG00000016494	zfr	100	73.754	MGP_SPRETEiJ_G0020574	Zfr	100	78.188	Mus_spretus
ENSCVAG00000016494	zfr	72	69.794	ENSMPUG00000015193	-	97	71.887	Mustela_putorius_furo
ENSCVAG00000016494	zfr	99	73.538	ENSMLUG00000011797	ZFR	99	75.192	Myotis_lucifugus
ENSCVAG00000016494	zfr	100	73.565	ENSNGAG00000018328	Zfr	98	75.094	Nannospalax_galili
ENSCVAG00000016494	zfr	100	82.552	ENSNBRG00000008378	zfr	99	82.851	Neolamprologus_brichardi
ENSCVAG00000016494	zfr	99	73.244	ENSNLEG00000014098	ZFR	99	75.121	Nomascus_leucogenys
ENSCVAG00000016494	zfr	98	68.335	ENSMEUG00000010225	ZFR	99	70.096	Notamacropus_eugenii
ENSCVAG00000016494	zfr	83	83.133	ENSOPRG00000016756	ZFR	82	83.133	Ochotona_princeps
ENSCVAG00000016494	zfr	98	73.314	ENSODEG00000001990	ZFR	99	75.072	Octodon_degus
ENSCVAG00000016494	zfr	80	80.222	ENSONIG00000013960	zfr	73	84.412	Oreochromis_niloticus
ENSCVAG00000016494	zfr	98	74.398	ENSOANG00000014434	ZFR	99	75.915	Ornithorhynchus_anatinus
ENSCVAG00000016494	zfr	100	73.491	ENSOCUG00000016737	ZFR	98	75.118	Oryctolagus_cuniculus
ENSCVAG00000016494	zfr	100	83.207	ENSORLG00000017243	zfr	98	83.191	Oryzias_latipes
ENSCVAG00000016494	zfr	100	83.112	ENSORLG00020014823	zfr	98	83.096	Oryzias_latipes_hni
ENSCVAG00000016494	zfr	100	83.017	ENSORLG00015005801	zfr	98	83.001	Oryzias_latipes_hsok
ENSCVAG00000016494	zfr	100	83.776	ENSOMEG00000003336	zfr	98	84.440	Oryzias_melastigma
ENSCVAG00000016494	zfr	100	71.254	ENSOGAG00000015117	ZFR	98	72.693	Otolemur_garnettii
ENSCVAG00000016494	zfr	99	73.340	ENSOARG00000012233	ZFR	99	74.495	Ovis_aries
ENSCVAG00000016494	zfr	99	73.084	ENSPPAG00000027447	ZFR	99	75.241	Pan_paniscus
ENSCVAG00000016494	zfr	100	73.540	ENSPPRG00000008253	ZFR	98	75.071	Panthera_pardus
ENSCVAG00000016494	zfr	99	73.282	ENSPTIG00000010038	ZFR	97	74.738	Panthera_tigris_altaica
ENSCVAG00000016494	zfr	100	73.302	ENSPTRG00000016771	ZFR	99	74.430	Pan_troglodytes
ENSCVAG00000016494	zfr	99	73.033	ENSPANG00000003729	ZFR	98	74.620	Papio_anubis
ENSCVAG00000016494	zfr	100	80.319	ENSPKIG00000016781	ZFR	99	79.052	Paramormyrops_kingsleyae
ENSCVAG00000016494	zfr	99	72.228	ENSPKIG00000007596	ZFR	99	72.130	Paramormyrops_kingsleyae
ENSCVAG00000016494	zfr	55	79.159	ENSPSIG00000005779	ZFR	98	81.934	Pelodiscus_sinensis
ENSCVAG00000016494	zfr	94	84.221	ENSPMGG00000015984	zfr	98	83.597	Periophthalmus_magnuspinnatus
ENSCVAG00000016494	zfr	96	71.973	ENSPEMG00000014573	Zfr	96	73.659	Peromyscus_maniculatus_bairdii
ENSCVAG00000016494	zfr	100	73.221	ENSPCIG00000020906	ZFR	98	75.259	Phascolarctos_cinereus
ENSCVAG00000016494	zfr	100	89.629	ENSPFOG00000005931	zfr	98	90.200	Poecilia_formosa
ENSCVAG00000016494	zfr	100	88.656	ENSPREG00000011947	zfr	98	89.800	Poecilia_reticulata
ENSCVAG00000016494	zfr	99	72.955	ENSPPYG00000015378	ZFR	99	74.831	Pongo_abelii
ENSCVAG00000016494	zfr	100	65.660	ENSPCAG00000007277	ZFR	98	67.861	Procavia_capensis
ENSCVAG00000016494	zfr	95	72.565	ENSPCOG00000000045	ZFR	97	74.081	Propithecus_coquereli
ENSCVAG00000016494	zfr	93	82.424	ENSPVAG00000004780	ZFR	91	82.424	Pteropus_vampyrus
ENSCVAG00000016494	zfr	100	85.514	ENSPNYG00000006239	zfr	99	85.814	Pundamilia_nyererei
ENSCVAG00000016494	zfr	99	81.312	ENSPNAG00000025151	zfr	99	82.306	Pygocentrus_nattereri
ENSCVAG00000016494	zfr	100	73.491	ENSRNOG00000011627	Zfr	99	82.031	Rattus_norvegicus
ENSCVAG00000016494	zfr	100	73.302	ENSRBIG00000041561	ZFR	99	74.738	Rhinopithecus_bieti
ENSCVAG00000016494	zfr	100	73.302	ENSRROG00000044008	ZFR	99	75.024	Rhinopithecus_roxellana
ENSCVAG00000016494	zfr	98	73.359	ENSSBOG00000024150	ZFR	99	75.024	Saimiri_boliviensis_boliviensis
ENSCVAG00000016494	zfr	98	73.467	ENSSHAG00000015478	ZFR	99	75.457	Sarcophilus_harrisii
ENSCVAG00000016494	zfr	100	73.396	ENSSFOG00015017300	ZFR	98	73.774	Scleropages_formosus
ENSCVAG00000016494	zfr	100	84.143	ENSSMAG00000000320	zfr	99	85.431	Scophthalmus_maximus
ENSCVAG00000016494	zfr	100	86.135	ENSSDUG00000013882	zfr	98	86.610	Seriola_dumerili
ENSCVAG00000016494	zfr	100	86.128	ENSSLDG00000000762	zfr	99	86.427	Seriola_lalandi_dorsalis
ENSCVAG00000016494	zfr	92	84.685	ENSSARG00000006571	ZFR	91	84.685	Sorex_araneus
ENSCVAG00000016494	zfr	98	73.359	ENSSPUG00000016786	ZFR	99	74.638	Sphenodon_punctatus
ENSCVAG00000016494	zfr	100	85.403	ENSSPAG00000019293	zfr	98	86.540	Stegastes_partitus
ENSCVAG00000016494	zfr	100	73.669	ENSSSCG00000027681	ZFR	99	75.271	Sus_scrofa
ENSCVAG00000016494	zfr	100	73.778	ENSTGUG00000001909	ZFR	99	75.399	Taeniopygia_guttata
ENSCVAG00000016494	zfr	100	83.681	ENSTRUG00000016620	zfr	98	83.951	Takifugu_rubripes
ENSCVAG00000016494	zfr	61	79.070	ENSTNIG00000018856	zfr	99	77.704	Tetraodon_nigroviridis
ENSCVAG00000016494	zfr	94	72.069	ENSTBEG00000017687	ZFR	93	71.277	Tupaia_belangeri
ENSCVAG00000016494	zfr	98	71.676	ENSTTRG00000017321	ZFR	96	73.147	Tursiops_truncatus
ENSCVAG00000016494	zfr	80	70.735	ENSUAMG00000000172	-	99	72.544	Ursus_americanus
ENSCVAG00000016494	zfr	80	70.735	ENSUMAG00000013805	-	99	72.544	Ursus_maritimus
ENSCVAG00000016494	zfr	98	74.085	ENSVPAG00000011011	ZFR	96	75.553	Vicugna_pacos
ENSCVAG00000016494	zfr	100	73.540	ENSVVUG00000022171	-	99	75.071	Vulpes_vulpes
ENSCVAG00000016494	zfr	100	67.684	ENSXETG00000015598	zfr	98	70.134	Xenopus_tropicalis
ENSCVAG00000016494	zfr	100	90.286	ENSXCOG00000009361	zfr	98	89.619	Xiphophorus_couchianus
ENSCVAG00000016494	zfr	100	90.476	ENSXMAG00000013356	zfr	98	89.810	Xiphophorus_maculatus