EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000016534 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 883-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6334 bases
Position: chrKL653831.1:61689-68022
Accession: 107102846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000013975	zf-C2H2	PF00096.26	4.3e-28	1	4
ENSCVAP00000013975	zf-C2H2	PF00096.26	4.3e-28	2	4
ENSCVAP00000013975	zf-C2H2	PF00096.26	4.3e-28	3	4
ENSCVAP00000013975	zf-C2H2	PF00096.26	4.3e-28	4	4
ENSCVAP00000013975	zf-met	PF12874.7	1.3e-11	1	2
ENSCVAP00000013975	zf-met	PF12874.7	1.3e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000021753	-	2868	XM_015402286	ENSCVAP00000013975	481 (aa)	XP_015257772	-

Gene Model

Click here to download ENSCVAG00000016534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000016534	-	50	38.690	ENSCVAG00000017168	gfi1b	55	38.690
ENSCVAG00000016534	-	57	36.638	ENSCVAG00000021225	-	95	43.478
ENSCVAG00000016534	-	54	45.455	ENSCVAG00000012302	-	84	45.455
ENSCVAG00000016534	-	53	42.857	ENSCVAG00000000419	-	71	42.857
ENSCVAG00000016534	-	56	36.628	ENSCVAG00000004508	-	65	36.628
ENSCVAG00000016534	-	55	35.821	ENSCVAG00000009981	-	74	40.650
ENSCVAG00000016534	-	50	39.623	ENSCVAG00000002242	-	93	39.623
ENSCVAG00000016534	-	53	30.508	ENSCVAG00000012420	si:dkey-89b17.4	55	30.508
ENSCVAG00000016534	-	56	35.821	ENSCVAG00000011235	-	87	35.055
ENSCVAG00000016534	-	51	36.816	ENSCVAG00000018485	-	97	36.816
ENSCVAG00000016534	-	58	36.078	ENSCVAG00000002488	-	72	36.078
ENSCVAG00000016534	-	51	39.407	ENSCVAG00000006673	-	60	39.407
ENSCVAG00000016534	-	54	36.441	ENSCVAG00000014404	-	88	36.441
ENSCVAG00000016534	-	52	37.097	ENSCVAG00000013692	prdm5	74	37.097
ENSCVAG00000016534	-	50	42.969	ENSCVAG00000003417	-	63	42.969
ENSCVAG00000016534	-	52	37.037	ENSCVAG00000009103	-	86	37.037
ENSCVAG00000016534	-	61	36.093	ENSCVAG00000019097	-	61	39.662
ENSCVAG00000016534	-	71	39.568	ENSCVAG00000014734	-	91	39.175
ENSCVAG00000016534	-	51	40.000	ENSCVAG00000008952	-	96	40.000
ENSCVAG00000016534	-	59	37.069	ENSCVAG00000006491	-	70	35.968
ENSCVAG00000016534	-	54	40.000	ENSCVAG00000012180	-	94	41.538
ENSCVAG00000016534	-	55	39.485	ENSCVAG00000012343	-	95	39.485
ENSCVAG00000016534	-	72	36.000	ENSCVAG00000014622	-	68	38.559
ENSCVAG00000016534	-	77	32.937	ENSCVAG00000008327	zbtb41	58	32.231
ENSCVAG00000016534	-	69	46.429	ENSCVAG00000018383	-	78	42.754
ENSCVAG00000016534	-	50	38.384	ENSCVAG00000013048	-	58	30.677
ENSCVAG00000016534	-	56	39.777	ENSCVAG00000016796	-	87	44.231
ENSCVAG00000016534	-	54	37.073	ENSCVAG00000007169	-	54	35.583
ENSCVAG00000016534	-	56	31.288	ENSCVAG00000004958	-	89	31.288
ENSCVAG00000016534	-	71	41.803	ENSCVAG00000012216	-	82	41.803
ENSCVAG00000016534	-	53	36.449	ENSCVAG00000007073	-	72	46.154
ENSCVAG00000016534	-	52	39.683	ENSCVAG00000006389	-	96	38.843
ENSCVAG00000016534	-	54	35.200	ENSCVAG00000016483	snai2	78	33.871
ENSCVAG00000016534	-	54	39.200	ENSCVAG00000017890	-	88	40.506
ENSCVAG00000016534	-	84	38.627	ENSCVAG00000001369	-	71	38.627
ENSCVAG00000016534	-	69	39.316	ENSCVAG00000020119	-	70	39.316
ENSCVAG00000016534	-	53	36.538	ENSCVAG00000008535	-	69	37.021
ENSCVAG00000016534	-	54	38.559	ENSCVAG00000012543	-	99	37.931
ENSCVAG00000016534	-	54	45.378	ENSCVAG00000001444	-	95	45.378
ENSCVAG00000016534	-	70	37.017	ENSCVAG00000005112	-	75	37.017
ENSCVAG00000016534	-	63	40.690	ENSCVAG00000000423	-	91	40.690
ENSCVAG00000016534	-	50	44.615	ENSCVAG00000011213	-	95	37.668
ENSCVAG00000016534	-	52	38.462	ENSCVAG00000001767	-	73	40.351
ENSCVAG00000016534	-	50	30.220	ENSCVAG00000007684	patz1	56	30.220
ENSCVAG00000016534	-	54	37.945	ENSCVAG00000010160	-	80	38.211
ENSCVAG00000016534	-	50	32.597	ENSCVAG00000018507	-	74	32.597
ENSCVAG00000016534	-	53	34.071	ENSCVAG00000018135	-	84	34.071
ENSCVAG00000016534	-	51	46.429	ENSCVAG00000000227	-	73	46.429
ENSCVAG00000016534	-	69	41.176	ENSCVAG00000015110	znf526	52	41.176
ENSCVAG00000016534	-	60	40.288	ENSCVAG00000003250	-	69	40.288
ENSCVAG00000016534	-	73	34.906	ENSCVAG00000000351	-	58	34.906
ENSCVAG00000016534	-	52	35.583	ENSCVAG00000019519	-	65	35.583
ENSCVAG00000016534	-	52	44.538	ENSCVAG00000003428	-	96	44.538
ENSCVAG00000016534	-	71	37.872	ENSCVAG00000003514	-	73	37.712
ENSCVAG00000016534	-	55	43.939	ENSCVAG00000003512	-	84	43.939
ENSCVAG00000016534	-	55	40.594	ENSCVAG00000016181	-	96	40.594
ENSCVAG00000016534	-	51	35.625	ENSCVAG00000000144	-	67	35.625
ENSCVAG00000016534	-	56	40.000	ENSCVAG00000020938	-	90	40.000
ENSCVAG00000016534	-	52	39.779	ENSCVAG00000002833	-	72	39.779
ENSCVAG00000016534	-	57	42.553	ENSCVAG00000010442	-	99	42.553
ENSCVAG00000016534	-	56	37.868	ENSCVAG00000016883	-	51	40.343
ENSCVAG00000016534	-	53	46.218	ENSCVAG00000020745	-	94	43.590
ENSCVAG00000016534	-	67	40.000	ENSCVAG00000003497	-	95	40.000
ENSCVAG00000016534	-	55	46.591	ENSCVAG00000002295	-	78	46.591
ENSCVAG00000016534	-	56	40.851	ENSCVAG00000012284	-	79	40.851
ENSCVAG00000016534	-	52	37.245	ENSCVAG00000022174	-	57	37.245
ENSCVAG00000016534	-	51	37.441	ENSCVAG00000017515	-	89	37.441
ENSCVAG00000016534	-	63	39.574	ENSCVAG00000017511	-	88	39.574
ENSCVAG00000016534	-	50	37.989	ENSCVAG00000002305	-	76	37.989
ENSCVAG00000016534	-	52	38.710	ENSCVAG00000019705	-	68	38.710
ENSCVAG00000016534	-	63	44.286	ENSCVAG00000021107	-	99	43.200
ENSCVAG00000016534	-	53	35.294	ENSCVAG00000003601	ZNF319	86	34.979
ENSCVAG00000016534	-	52	40.426	ENSCVAG00000008200	-	91	40.426
ENSCVAG00000016534	-	53	39.574	ENSCVAG00000008206	-	85	40.698
ENSCVAG00000016534	-	53	40.678	ENSCVAG00000011469	-	77	40.678
ENSCVAG00000016534	-	64	35.811	ENSCVAG00000003434	-	91	35.811
ENSCVAG00000016534	-	54	38.596	ENSCVAG00000003433	-	88	38.596
ENSCVAG00000016534	-	51	38.756	ENSCVAG00000012520	-	79	38.756
ENSCVAG00000016534	-	66	37.019	ENSCVAG00000006460	-	72	38.197
ENSCVAG00000016534	-	54	39.744	ENSCVAG00000012228	-	84	39.744
ENSCVAG00000016534	-	58	44.086	ENSCVAG00000002500	-	98	44.086
ENSCVAG00000016534	-	55	42.529	ENSCVAG00000002506	-	96	41.739
ENSCVAG00000016534	-	61	37.872	ENSCVAG00000020126	-	89	38.819
ENSCVAG00000016534	-	76	37.681	ENSCVAG00000016325	znf341	53	35.897
ENSCVAG00000016534	-	52	37.500	ENSCVAG00000019646	-	65	37.712
ENSCVAG00000016534	-	63	37.580	ENSCVAG00000004368	-	89	37.580
ENSCVAG00000016534	-	59	34.632	ENSCVAG00000002284	-	65	44.706
ENSCVAG00000016534	-	52	50.820	ENSCVAG00000015616	-	77	50.820
ENSCVAG00000016534	-	51	35.000	ENSCVAG00000009258	znf319b	79	35.833
ENSCVAG00000016534	-	58	39.381	ENSCVAG00000001568	-	77	39.381
ENSCVAG00000016534	-	64	41.007	ENSCVAG00000011334	-	78	41.007
ENSCVAG00000016534	-	75	44.715	ENSCVAG00000013382	-	77	44.715
ENSCVAG00000016534	-	59	45.902	ENSCVAG00000017005	sall3b	64	49.383
ENSCVAG00000016534	-	74	37.553	ENSCVAG00000014269	-	99	38.136
ENSCVAG00000016534	-	61	45.652	ENSCVAG00000022991	-	92	45.652
ENSCVAG00000016534	-	52	42.963	ENSCVAG00000013337	-	91	40.254
ENSCVAG00000016534	-	54	36.287	ENSCVAG00000019764	-	59	37.712
ENSCVAG00000016534	-	52	38.750	ENSCVAG00000019537	-	82	41.290
ENSCVAG00000016534	-	69	36.759	ENSCVAG00000016092	-	84	36.759
ENSCVAG00000016534	-	56	36.404	ENSCVAG00000016098	-	97	36.404
ENSCVAG00000016534	-	55	30.137	ENSCVAG00000001609	-	67	37.143
ENSCVAG00000016534	-	55	38.249	ENSCVAG00000005507	-	91	38.514

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016534	-	79	63.780	ENSAPOG00000001563	-	84	83.607	Acanthochromis_polyacanthus
ENSCVAG00000016534	-	54	81.364	ENSACIG00000015411	-	83	81.364	Amphilophus_citrinellus
ENSCVAG00000016534	-	50	34.555	ENSAOCG00000013589	-	89	40.881	Amphiprion_ocellaris
ENSCVAG00000016534	-	77	63.228	ENSAOCG00000013505	-	73	65.608	Amphiprion_ocellaris
ENSCVAG00000016534	-	50	32.857	ENSAPEG00000022774	-	83	33.810	Amphiprion_percula
ENSCVAG00000016534	-	77	63.492	ENSAPEG00000022756	-	74	62.963	Amphiprion_percula
ENSCVAG00000016534	-	59	42.857	ENSACLG00000008624	-	86	42.857	Astatotilapia_calliptera
ENSCVAG00000016534	-	68	68.454	ENSCSEG00000008903	-	97	68.454	Cynoglossus_semilaevis
ENSCVAG00000016534	-	51	64.167	ENSGMOG00000000494	-	97	64.167	Gadus_morhua
ENSCVAG00000016534	-	77	76.064	ENSGAFG00000002659	-	88	65.985	Gambusia_affinis
ENSCVAG00000016534	-	61	83.122	ENSGACG00000001377	-	92	83.265	Gasterosteus_aculeatus
ENSCVAG00000016534	-	54	43.262	ENSHBUG00000008502	-	82	43.357	Haplochromis_burtoni
ENSCVAG00000016534	-	53	82.283	ENSHCOG00000000511	-	73	71.246	Hippocampus_comes
ENSCVAG00000016534	-	50	76.569	ENSLBEG00000018509	-	91	77.632	Labrus_bergylta
ENSCVAG00000016534	-	78	62.406	ENSMAMG00000018137	-	74	66.854	Mastacembelus_armatus
ENSCVAG00000016534	-	54	43.262	ENSMZEG00005002583	-	81	43.357	Maylandia_zebra
ENSCVAG00000016534	-	54	78.212	ENSMMOG00000009733	-	83	78.212	Mola_mola
ENSCVAG00000016534	-	53	84.689	ENSNBRG00000008223	-	78	82.716	Neolamprologus_brichardi
ENSCVAG00000016534	-	53	83.830	ENSONIG00000017233	-	99	83.475	Oreochromis_niloticus
ENSCVAG00000016534	-	50	74.274	ENSOMEG00000016463	-	59	74.494	Oryzias_melastigma
ENSCVAG00000016534	-	67	66.116	ENSPMGG00000002384	-	88	66.116	Periophthalmus_magnuspinnatus
ENSCVAG00000016534	-	77	76.862	ENSPFOG00000006287	-	85	76.862	Poecilia_formosa
ENSCVAG00000016534	-	71	75.145	ENSPLAG00000003412	-	70	75.145	Poecilia_latipinna
ENSCVAG00000016534	-	77	76.862	ENSPMEG00000005897	-	78	76.862	Poecilia_mexicana
ENSCVAG00000016534	-	52	93.548	ENSPREG00000021246	-	92	93.469	Poecilia_reticulata
ENSCVAG00000016534	-	50	82.988	ENSPNYG00000023088	-	54	82.988	Pundamilia_nyererei
ENSCVAG00000016534	-	94	55.809	ENSSDUG00000004892	-	88	56.571	Seriola_dumerili
ENSCVAG00000016534	-	73	64.835	ENSSLDG00000005670	-	91	64.986	Seriola_lalandi_dorsalis
ENSCVAG00000016534	-	51	42.857	ENSSPAG00000022219	-	56	41.748	Stegastes_partitus
ENSCVAG00000016534	-	52	85.654	ENSTNIG00000011188	-	98	85.654	Tetraodon_nigroviridis
ENSCVAG00000016534	-	77	76.064	ENSXMAG00000000866	-	71	76.064	Xiphophorus_maculatus