EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000016571 (Gene tree)
Gene ID: 107096512
Gene Symbol: SMARCA2
Alias: wu:fa56c07|wu:fi27f11|zgc:66238
Full Name: probable global transcription activator SNF2L2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 32198 bases
Position: chrKL653129.1:29578-61775
Accession: 107096512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000013952	BRK	PF07533.16	1.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000021649	SMARCA2-201	4041	XM_015393191	ENSCVAP00000013952	1346 (aa)	XP_015248677	-

Gene Model

Click here to download ENSCVAG00000016571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000016571	SMARCA2	93	69.444	ENSCVAG00000006979	smarca4a	65	79.340
ENSCVAG00000016571	SMARCA2	93	70.227	ENSCVAG00000003018	-	67	79.943

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016571	SMARCA2	75	86.346	ENSG00000080503	SMARCA2	99	98.000	Homo_sapiens
ENSCVAG00000016571	SMARCA2	98	89.116	ENSAPOG00000002641	SMARCA2	95	89.023	Acanthochromis_polyacanthus
ENSCVAG00000016571	SMARCA2	95	75.350	ENSAMEG00000012325	SMARCA2	79	86.346	Ailuropoda_melanoleuca
ENSCVAG00000016571	SMARCA2	98	88.161	ENSACIG00000015607	SMARCA2	85	88.161	Amphilophus_citrinellus
ENSCVAG00000016571	SMARCA2	98	88.362	ENSAOCG00000009647	-	85	88.165	Amphiprion_ocellaris
ENSCVAG00000016571	SMARCA2	98	88.270	ENSAPEG00000007646	SMARCA2	93	88.654	Amphiprion_percula
ENSCVAG00000016571	SMARCA2	98	88.519	ENSATEG00000006916	SMARCA2	84	88.370	Anabas_testudineus
ENSCVAG00000016571	SMARCA2	95	77.217	ENSAPLG00000013873	SMARCA2	89	76.535	Anas_platyrhynchos
ENSCVAG00000016571	SMARCA2	95	77.152	ENSACAG00000002423	SMARCA2	84	78.167	Anolis_carolinensis
ENSCVAG00000016571	SMARCA2	95	78.120	ENSANAG00000026498	SMARCA2	93	79.313	Aotus_nancymaae
ENSCVAG00000016571	SMARCA2	98	88.473	ENSACLG00000004248	SMARCA2	84	88.672	Astatotilapia_calliptera
ENSCVAG00000016571	SMARCA2	98	83.283	ENSAMXG00000012404	smarca2	85	81.698	Astyanax_mexicanus
ENSCVAG00000016571	SMARCA2	95	80.062	ENSBTAG00000007494	SMARCA2	84	80.210	Bos_taurus
ENSCVAG00000016571	SMARCA2	95	78.746	ENSCJAG00000010710	SMARCA2	94	80.179	Callithrix_jacchus
ENSCVAG00000016571	SMARCA2	95	79.892	ENSCAFG00000002013	SMARCA2	84	79.241	Canis_familiaris
ENSCVAG00000016571	SMARCA2	73	86.653	ENSCAFG00020026802	SMARCA2	81	86.566	Canis_lupus_dingo
ENSCVAG00000016571	SMARCA2	95	80.062	ENSCHIG00000025863	SMARCA2	84	80.210	Capra_hircus
ENSCVAG00000016571	SMARCA2	95	76.235	ENSTSYG00000003858	SMARCA2	86	79.572	Carlito_syrichta
ENSCVAG00000016571	SMARCA2	75	83.858	ENSCAPG00000002890	SMARCA2	85	77.861	Cavia_aperea
ENSCVAG00000016571	SMARCA2	75	85.965	ENSCPOG00000005475	SMARCA2	84	79.851	Cavia_porcellus
ENSCVAG00000016571	SMARCA2	95	78.899	ENSCCAG00000030636	SMARCA2	93	79.627	Cebus_capucinus
ENSCVAG00000016571	SMARCA2	95	76.905	ENSCATG00000031470	SMARCA2	95	79.042	Cercocebus_atys
ENSCVAG00000016571	SMARCA2	75	86.444	ENSCLAG00000014484	SMARCA2	84	79.689	Chinchilla_lanigera
ENSCVAG00000016571	SMARCA2	95	79.250	ENSCSAG00000008650	SMARCA2	90	80.045	Chlorocebus_sabaeus
ENSCVAG00000016571	SMARCA2	85	83.000	ENSCHOG00000004316	SMARCA2	74	83.000	Choloepus_hoffmanni
ENSCVAG00000016571	SMARCA2	95	82.794	ENSCPBG00000025463	SMARCA2	83	82.979	Chrysemys_picta_bellii
ENSCVAG00000016571	SMARCA2	95	79.479	ENSCANG00000039597	SMARCA2	93	80.419	Colobus_angolensis_palliatus
ENSCVAG00000016571	SMARCA2	95	73.591	ENSCGRG00001002323	Smarca2	84	73.933	Cricetulus_griseus_chok1gshd
ENSCVAG00000016571	SMARCA2	98	84.036	ENSCSEG00000019311	SMARCA2	84	84.036	Cynoglossus_semilaevis
ENSCVAG00000016571	SMARCA2	98	81.811	ENSDARG00000008904	smarca2	85	81.296	Danio_rerio
ENSCVAG00000016571	SMARCA2	95	77.938	ENSDNOG00000006402	SMARCA2	85	78.335	Dasypus_novemcinctus
ENSCVAG00000016571	SMARCA2	95	79.785	ENSDORG00000014832	Smarca2	84	80.089	Dipodomys_ordii
ENSCVAG00000016571	SMARCA2	77	64.212	FBgn0000212	brm	62	64.951	Drosophila_melanogaster
ENSCVAG00000016571	SMARCA2	87	60.229	ENSEBUG00000002449	-	72	65.968	Eptatretus_burgeri
ENSCVAG00000016571	SMARCA2	97	70.767	ENSEBUG00000011442	-	87	69.156	Eptatretus_burgeri
ENSCVAG00000016571	SMARCA2	95	80.000	ENSEASG00005010312	SMARCA2	84	80.449	Equus_asinus_asinus
ENSCVAG00000016571	SMARCA2	61	69.776	ENSEEUG00000015540	-	56	71.142	Erinaceus_europaeus
ENSCVAG00000016571	SMARCA2	98	78.566	ENSELUG00000010318	smarca2	91	77.938	Esox_lucius
ENSCVAG00000016571	SMARCA2	95	79.738	ENSFCAG00000001568	SMARCA2	84	78.869	Felis_catus
ENSCVAG00000016571	SMARCA2	95	79.923	ENSFDAG00000010502	SMARCA2	83	79.985	Fukomys_damarensis
ENSCVAG00000016571	SMARCA2	98	93.025	ENSFHEG00000021250	SMARCA2	85	90.801	Fundulus_heteroclitus
ENSCVAG00000016571	SMARCA2	98	81.091	ENSGMOG00000014229	SMARCA2	85	80.464	Gadus_morhua
ENSCVAG00000016571	SMARCA2	95	77.599	ENSGALG00000010164	SMARCA2	84	78.164	Gallus_gallus
ENSCVAG00000016571	SMARCA2	98	90.279	ENSGAFG00000001164	SMARCA2	86	90.498	Gambusia_affinis
ENSCVAG00000016571	SMARCA2	98	85.122	ENSGACG00000014488	SMARCA2	86	84.804	Gasterosteus_aculeatus
ENSCVAG00000016571	SMARCA2	95	78.185	ENSGAGG00000024412	SMARCA2	84	78.016	Gopherus_agassizii
ENSCVAG00000016571	SMARCA2	98	88.398	ENSHBUG00000006691	SMARCA2	85	87.722	Haplochromis_burtoni
ENSCVAG00000016571	SMARCA2	75	85.798	ENSHGLG00000005215	SMARCA2	84	79.041	Heterocephalus_glaber_female
ENSCVAG00000016571	SMARCA2	95	79.907	ENSHGLG00100010496	SMARCA2	84	79.850	Heterocephalus_glaber_male
ENSCVAG00000016571	SMARCA2	98	81.046	ENSHCOG00000015348	-	91	84.902	Hippocampus_comes
ENSCVAG00000016571	SMARCA2	98	83.598	ENSIPUG00000011060	smarca2	92	82.769	Ictalurus_punctatus
ENSCVAG00000016571	SMARCA2	77	85.238	ENSSTOG00000006812	SMARCA2	85	79.613	Ictidomys_tridecemlineatus
ENSCVAG00000016571	SMARCA2	95	79.785	ENSJJAG00000010867	Smarca2	84	79.940	Jaculus_jaculus
ENSCVAG00000016571	SMARCA2	77	92.571	ENSKMAG00000015844	-	85	88.668	Kryptolebias_marmoratus
ENSCVAG00000016571	SMARCA2	55	62.753	ENSLACG00000000270	SMARCA2	85	75.813	Latimeria_chalumnae
ENSCVAG00000016571	SMARCA2	95	81.188	ENSLOCG00000011499	smarca2	64	88.338	Lepisosteus_oculatus
ENSCVAG00000016571	SMARCA2	95	77.368	ENSLAFG00000014061	SMARCA2	85	79.142	Loxodonta_africana
ENSCVAG00000016571	SMARCA2	95	80.216	ENSMFAG00000003814	SMARCA2	93	80.135	Macaca_fascicularis
ENSCVAG00000016571	SMARCA2	95	80.431	ENSMMUG00000015279	SMARCA2	89	80.568	Macaca_mulatta
ENSCVAG00000016571	SMARCA2	95	78.931	ENSMNEG00000041069	SMARCA2	94	80.419	Macaca_nemestrina
ENSCVAG00000016571	SMARCA2	75	86.248	ENSMLEG00000027418	SMARCA2	94	79.685	Mandrillus_leucophaeus
ENSCVAG00000016571	SMARCA2	98	90.060	ENSMAMG00000003056	SMARCA2	95	90.286	Mastacembelus_armatus
ENSCVAG00000016571	SMARCA2	98	88.473	ENSMZEG00005020709	SMARCA2	85	87.908	Maylandia_zebra
ENSCVAG00000016571	SMARCA2	85	64.861	ENSMGAG00000005160	-	99	58.985	Meleagris_gallopavo
ENSCVAG00000016571	SMARCA2	95	79.939	ENSMICG00000005162	SMARCA2	94	79.522	Microcebus_murinus
ENSCVAG00000016571	SMARCA2	95	79.084	ENSMOCG00000001611	Smarca2	84	80.015	Microtus_ochrogaster
ENSCVAG00000016571	SMARCA2	98	87.697	ENSMMOG00000014196	SMARCA2	87	88.311	Mola_mola
ENSCVAG00000016571	SMARCA2	94	78.096	ENSMODG00000003578	SMARCA2	84	78.312	Monodelphis_domestica
ENSCVAG00000016571	SMARCA2	98	90.813	ENSMALG00000009611	SMARCA2	84	90.731	Monopterus_albus
ENSCVAG00000016571	SMARCA2	77	84.952	MGP_CAROLIEiJ_G0022841	Smarca2	89	78.293	Mus_caroli
ENSCVAG00000016571	SMARCA2	77	84.952	ENSMUSG00000024921	Smarca2	99	98.000	Mus_musculus
ENSCVAG00000016571	SMARCA2	77	85.143	MGP_PahariEiJ_G0014334	Smarca2	89	78.951	Mus_pahari
ENSCVAG00000016571	SMARCA2	77	94.902	MGP_SPRETEiJ_G0023759	Smarca2	76	94.902	Mus_spretus
ENSCVAG00000016571	SMARCA2	75	86.092	ENSMPUG00000005171	SMARCA2	75	86.190	Mustela_putorius_furo
ENSCVAG00000016571	SMARCA2	95	79.170	ENSNGAG00000000108	Smarca2	83	79.581	Nannospalax_galili
ENSCVAG00000016571	SMARCA2	92	81.349	ENSNBRG00000017998	SMARCA2	94	83.582	Neolamprologus_brichardi
ENSCVAG00000016571	SMARCA2	76	84.511	ENSNLEG00000008575	SMARCA2	93	78.378	Nomascus_leucogenys
ENSCVAG00000016571	SMARCA2	95	73.184	ENSMEUG00000009812	SMARCA2	83	73.913	Notamacropus_eugenii
ENSCVAG00000016571	SMARCA2	75	80.059	ENSOPRG00000013474	SMARCA2	85	74.446	Ochotona_princeps
ENSCVAG00000016571	SMARCA2	77	85.143	ENSODEG00000005452	SMARCA2	84	78.672	Octodon_degus
ENSCVAG00000016571	SMARCA2	54	85.946	ENSOANG00000008299	-	95	85.965	Ornithorhynchus_anatinus
ENSCVAG00000016571	SMARCA2	75	85.881	ENSOCUG00000006320	SMARCA2	85	79.451	Oryctolagus_cuniculus
ENSCVAG00000016571	SMARCA2	98	88.293	ENSORLG00000020820	SMARCA2	95	88.293	Oryzias_latipes
ENSCVAG00000016571	SMARCA2	98	88.729	ENSORLG00015006289	SMARCA2	94	88.729	Oryzias_latipes_hsok
ENSCVAG00000016571	SMARCA2	98	88.054	ENSOMEG00000009736	-	88	87.462	Oryzias_melastigma
ENSCVAG00000016571	SMARCA2	75	86.346	ENSOGAG00000017053	SMARCA2	65	86.479	Otolemur_garnettii
ENSCVAG00000016571	SMARCA2	75	86.261	ENSOARG00000013265	SMARCA2	84	79.238	Ovis_aries
ENSCVAG00000016571	SMARCA2	87	86.540	ENSPPAG00000038717	SMARCA2	83	85.798	Pan_paniscus
ENSCVAG00000016571	SMARCA2	95	79.815	ENSPPRG00000001879	SMARCA2	84	78.943	Panthera_pardus
ENSCVAG00000016571	SMARCA2	95	79.459	ENSPTRG00000051168	SMARCA2	93	80.120	Pan_troglodytes
ENSCVAG00000016571	SMARCA2	95	75.713	ENSPANG00000025121	SMARCA2	84	76.015	Papio_anubis
ENSCVAG00000016571	SMARCA2	98	82.007	ENSPKIG00000018469	-	84	81.695	Paramormyrops_kingsleyae
ENSCVAG00000016571	SMARCA2	94	77.556	ENSPSIG00000006284	SMARCA2	84	77.474	Pelodiscus_sinensis
ENSCVAG00000016571	SMARCA2	98	83.234	ENSPMGG00000013696	-	86	83.010	Periophthalmus_magnuspinnatus
ENSCVAG00000016571	SMARCA2	95	78.142	ENSPEMG00000019821	Smarca2	84	78.720	Peromyscus_maniculatus_bairdii
ENSCVAG00000016571	SMARCA2	51	76.826	ENSPMAG00000001030	-	100	77.247	Petromyzon_marinus
ENSCVAG00000016571	SMARCA2	75	75.580	ENSPMAG00000005337	-	67	76.026	Petromyzon_marinus
ENSCVAG00000016571	SMARCA2	95	78.825	ENSPCIG00000015658	SMARCA2	84	79.085	Phascolarctos_cinereus
ENSCVAG00000016571	SMARCA2	98	89.653	ENSPFOG00000001856	SMARCA2	66	93.429	Poecilia_formosa
ENSCVAG00000016571	SMARCA2	98	87.406	ENSPLAG00000017829	SMARCA2	83	88.758	Poecilia_latipinna
ENSCVAG00000016571	SMARCA2	98	88.485	ENSPMEG00000001815	-	84	88.485	Poecilia_mexicana
ENSCVAG00000016571	SMARCA2	98	89.970	ENSPREG00000013800	SMARCA2	87	88.097	Poecilia_reticulata
ENSCVAG00000016571	SMARCA2	95	79.939	ENSPPYG00000019258	SMARCA2	84	80.194	Pongo_abelii
ENSCVAG00000016571	SMARCA2	76	75.352	ENSPCAG00000016969	SMARCA2	67	75.352	Procavia_capensis
ENSCVAG00000016571	SMARCA2	95	77.650	ENSPCOG00000025709	SMARCA2	94	77.877	Propithecus_coquereli
ENSCVAG00000016571	SMARCA2	92	80.815	ENSPVAG00000000901	SMARCA2	82	81.055	Pteropus_vampyrus
ENSCVAG00000016571	SMARCA2	98	84.731	ENSPNYG00000004533	SMARCA2	85	83.531	Pundamilia_nyererei
ENSCVAG00000016571	SMARCA2	98	82.051	ENSPNAG00000014635	smarca2	84	82.271	Pygocentrus_nattereri
ENSCVAG00000016571	SMARCA2	77	84.952	ENSRNOG00000011931	Smarca2	90	79.021	Rattus_norvegicus
ENSCVAG00000016571	SMARCA2	76	85.562	ENSRBIG00000038618	SMARCA2	94	79.985	Rhinopithecus_bieti
ENSCVAG00000016571	SMARCA2	95	77.412	ENSRROG00000019271	SMARCA2	94	80.194	Rhinopithecus_roxellana
ENSCVAG00000016571	SMARCA2	88	86.346	ENSSBOG00000034827	SMARCA2	80	86.479	Saimiri_boliviensis_boliviensis
ENSCVAG00000016571	SMARCA2	94	78.096	ENSSHAG00000007884	SMARCA2	85	78.164	Sarcophilus_harrisii
ENSCVAG00000016571	SMARCA2	98	83.808	ENSSFOG00015014870	SMARCA2	92	82.834	Scleropages_formosus
ENSCVAG00000016571	SMARCA2	98	88.297	ENSSMAG00000013707	SMARCA2	84	88.200	Scophthalmus_maximus
ENSCVAG00000016571	SMARCA2	98	88.914	ENSSDUG00000008852	-	84	89.367	Seriola_dumerili
ENSCVAG00000016571	SMARCA2	98	87.622	ENSSLDG00000025449	SMARCA2	84	87.922	Seriola_lalandi_dorsalis
ENSCVAG00000016571	SMARCA2	95	66.975	ENSSARG00000007888	SMARCA2	79	72.337	Sorex_araneus
ENSCVAG00000016571	SMARCA2	92	77.603	ENSSPUG00000001629	SMARCA2	83	77.427	Sphenodon_punctatus
ENSCVAG00000016571	SMARCA2	98	90.371	ENSSPAG00000020091	-	87	90.083	Stegastes_partitus
ENSCVAG00000016571	SMARCA2	95	79.985	ENSSSCG00000005232	SMARCA2	84	80.135	Sus_scrofa
ENSCVAG00000016571	SMARCA2	98	86.130	ENSTRUG00000015619	SMARCA2	85	86.289	Takifugu_rubripes
ENSCVAG00000016571	SMARCA2	69	97.619	ENSTBEG00000008767	SMARCA2	66	97.619	Tupaia_belangeri
ENSCVAG00000016571	SMARCA2	95	79.247	ENSTTRG00000002033	SMARCA2	83	79.551	Tursiops_truncatus
ENSCVAG00000016571	SMARCA2	96	79.061	ENSUAMG00000024701	SMARCA2	94	78.310	Ursus_americanus
ENSCVAG00000016571	SMARCA2	86	76.826	ENSVPAG00000001204	SMARCA2	80	77.507	Vicugna_pacos
ENSCVAG00000016571	SMARCA2	73	86.364	ENSVVUG00000004598	SMARCA2	83	86.276	Vulpes_vulpes
ENSCVAG00000016571	SMARCA2	98	74.130	ENSXETG00000015299	smarca2	85	73.608	Xenopus_tropicalis
ENSCVAG00000016571	SMARCA2	98	91.225	ENSXCOG00000011073	SMARCA2	94	91.225	Xiphophorus_couchianus
ENSCVAG00000016571	SMARCA2	98	91.245	ENSXMAG00000015611	SMARCA2	83	91.396	Xiphophorus_maculatus