EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000016785 (Gene tree)
Gene ID: 107099923
Gene Symbol: zbtb18
Alias: si:ch211-221n23.1|znf238
Full Name: zinc finger and BTB domain containing 18
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 10112 bases
Position: chrKL653419.1:283387-293498
Accession: 107099923
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000029202	zf-C2H2	PF00096.26	3.4e-13	1	3
ENSCVAP00000029202	zf-C2H2	PF00096.26	3.4e-13	2	3
ENSCVAP00000029202	zf-C2H2	PF00096.26	3.4e-13	3	3
ENSCVAP00000014196	zf-C2H2	PF00096.26	3.2e-12	1	3
ENSCVAP00000014196	zf-C2H2	PF00096.26	3.2e-12	2	3
ENSCVAP00000014196	zf-C2H2	PF00096.26	3.2e-12	3	3
ENSCVAP00000014196	zf-met	PF12874.7	2.3e-05	1	1
ENSCVAP00000029202	zf-met	PF12874.7	2.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000021951	-	5510	XM_015398230	ENSCVAP00000029202	584 (aa)	XP_015253716	UPI000742C4F2
ENSCVAT00000021947	-	5642	XM_015398231	ENSCVAP00000014196	576 (aa)	XP_015253717	UPI00074285C4

Gene Model

Click here to download ENSCVAG00000016785's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016785's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000016785	zbtb18	51	35.252	ENSCVAG00000005449	bcl6b	54	44.000
ENSCVAG00000016785	zbtb18	52	41.026	ENSCVAG00000007140	zbtb16a	55	41.026

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016785	zbtb18	100	94.301	ENSAPOG00000005168	zbtb18	100	93.782	Acanthochromis_polyacanthus
ENSCVAG00000016785	zbtb18	99	84.912	ENSACIG00000008655	zbtb18	100	78.957	Amphilophus_citrinellus
ENSCVAG00000016785	zbtb18	100	94.549	ENSAOCG00000014105	zbtb18	100	94.037	Amphiprion_ocellaris
ENSCVAG00000016785	zbtb18	100	93.643	ENSAPEG00000003817	zbtb18	79	93.299	Amphiprion_percula
ENSCVAG00000016785	zbtb18	100	93.750	ENSATEG00000010192	zbtb18	100	93.750	Anabas_testudineus
ENSCVAG00000016785	zbtb18	100	94.349	ENSACLG00000022978	zbtb18	100	94.349	Astatotilapia_calliptera
ENSCVAG00000016785	zbtb18	100	73.129	ENSAMXG00000042119	zbtb18	100	73.129	Astyanax_mexicanus
ENSCVAG00000016785	zbtb18	100	91.267	ENSCSEG00000003083	zbtb18	100	91.267	Cynoglossus_semilaevis
ENSCVAG00000016785	zbtb18	98	72.251	ENSDARG00000028228	zbtb18	100	74.520	Danio_rerio
ENSCVAG00000016785	zbtb18	99	75.215	ENSELUG00000013471	zbtb18	99	75.215	Esox_lucius
ENSCVAG00000016785	zbtb18	99	96.167	ENSFHEG00000020005	zbtb18	99	96.167	Fundulus_heteroclitus
ENSCVAG00000016785	zbtb18	56	94.656	ENSGMOG00000018718	zbtb18	59	90.845	Gadus_morhua
ENSCVAG00000016785	zbtb18	100	94.464	ENSGAFG00000000619	zbtb18	100	94.464	Gambusia_affinis
ENSCVAG00000016785	zbtb18	99	89.298	ENSGACG00000010518	zbtb18	96	89.825	Gasterosteus_aculeatus
ENSCVAG00000016785	zbtb18	100	94.097	ENSHBUG00000013654	zbtb18	100	94.097	Haplochromis_burtoni
ENSCVAG00000016785	zbtb18	61	83.158	ENSHCOG00000002345	zbtb18	94	83.158	Hippocampus_comes
ENSCVAG00000016785	zbtb18	100	66.105	ENSIPUG00000008912	zbtb18	100	65.816	Ictalurus_punctatus
ENSCVAG00000016785	zbtb18	100	95.205	ENSKMAG00000002780	zbtb18	100	95.205	Kryptolebias_marmoratus
ENSCVAG00000016785	zbtb18	100	92.361	ENSLBEG00000014796	zbtb18	100	92.361	Labrus_bergylta
ENSCVAG00000016785	zbtb18	84	59.400	ENSMFAG00000033326	ZBTB18	99	58.600	Macaca_fascicularis
ENSCVAG00000016785	zbtb18	84	59.519	ENSMMUG00000015664	ZBTB18	100	58.704	Macaca_mulatta
ENSCVAG00000016785	zbtb18	100	94.271	ENSMAMG00000021720	zbtb18	100	94.271	Mastacembelus_armatus
ENSCVAG00000016785	zbtb18	100	94.349	ENSMZEG00005027394	zbtb18	100	94.349	Maylandia_zebra
ENSCVAG00000016785	zbtb18	94	51.107	ENSMGAG00000015389	-	100	51.009	Meleagris_gallopavo
ENSCVAG00000016785	zbtb18	98	85.159	ENSMMOG00000007888	zbtb18	99	85.159	Mola_mola
ENSCVAG00000016785	zbtb18	100	92.708	ENSMALG00000000725	zbtb18	100	92.708	Monopterus_albus
ENSCVAG00000016785	zbtb18	98	94.336	ENSNBRG00000013796	zbtb18	100	94.336	Neolamprologus_brichardi
ENSCVAG00000016785	zbtb18	100	94.444	ENSONIG00000000862	zbtb18	100	94.444	Oreochromis_niloticus
ENSCVAG00000016785	zbtb18	100	93.836	ENSORLG00000027425	zbtb18	100	93.836	Oryzias_latipes
ENSCVAG00000016785	zbtb18	100	94.007	ENSORLG00020011988	zbtb18	100	94.007	Oryzias_latipes_hni
ENSCVAG00000016785	zbtb18	100	93.836	ENSORLG00015017457	zbtb18	100	93.836	Oryzias_latipes_hsok
ENSCVAG00000016785	zbtb18	100	94.349	ENSOMEG00000011249	zbtb18	100	94.349	Oryzias_melastigma
ENSCVAG00000016785	zbtb18	98	55.017	ENSPKIG00000008787	-	100	55.017	Paramormyrops_kingsleyae
ENSCVAG00000016785	zbtb18	99	70.690	ENSPKIG00000021964	zbtb18	97	70.389	Paramormyrops_kingsleyae
ENSCVAG00000016785	zbtb18	98	83.009	ENSPMGG00000008020	zbtb18	100	83.009	Periophthalmus_magnuspinnatus
ENSCVAG00000016785	zbtb18	98	93.993	ENSPFOG00000022080	zbtb18	100	93.993	Poecilia_formosa
ENSCVAG00000016785	zbtb18	98	87.986	ENSPLAG00000011299	-	100	87.986	Poecilia_latipinna
ENSCVAG00000016785	zbtb18	98	87.986	ENSPLAG00000020960	zbtb18	100	87.986	Poecilia_latipinna
ENSCVAG00000016785	zbtb18	98	94.876	ENSPMEG00000007554	zbtb18	100	94.876	Poecilia_mexicana
ENSCVAG00000016785	zbtb18	100	94.701	ENSPREG00000008576	zbtb18	100	94.701	Poecilia_reticulata
ENSCVAG00000016785	zbtb18	100	94.097	ENSPNYG00000001530	zbtb18	100	94.097	Pundamilia_nyererei
ENSCVAG00000016785	zbtb18	86	70.565	ENSPNAG00000014066	zbtb18	87	70.565	Pygocentrus_nattereri
ENSCVAG00000016785	zbtb18	98	91.858	ENSSMAG00000018041	zbtb18	100	91.858	Scophthalmus_maximus
ENSCVAG00000016785	zbtb18	98	94.690	ENSSDUG00000018660	zbtb18	100	94.690	Seriola_dumerili
ENSCVAG00000016785	zbtb18	98	94.867	ENSSLDG00000022573	zbtb18	100	94.867	Seriola_lalandi_dorsalis
ENSCVAG00000016785	zbtb18	94	51.277	ENSSPUG00000010554	-	100	50.640	Sphenodon_punctatus
ENSCVAG00000016785	zbtb18	100	94.618	ENSSPAG00000002691	zbtb18	100	94.618	Stegastes_partitus
ENSCVAG00000016785	zbtb18	98	91.504	ENSTRUG00000020604	zbtb18	100	91.504	Takifugu_rubripes
ENSCVAG00000016785	zbtb18	99	85.166	ENSTNIG00000000430	zbtb18	99	85.864	Tetraodon_nigroviridis
ENSCVAG00000016785	zbtb18	98	89.223	ENSXCOG00000013308	zbtb18	100	88.339	Xiphophorus_couchianus
ENSCVAG00000016785	zbtb18	99	84.764	ENSXMAG00000018241	zbtb18	99	84.764	Xiphophorus_maculatus