EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000016808 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10590 bases
Position: chrKL652681.1:966200-976789
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014200	RNase_Zc3h12a	PF11977.8	3.6e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031020	-	780	-	ENSCVAP00000014200	259 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000016808's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016808's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000016808	-	87	60.352	ENSCVAG00000001077	-	81	57.759

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016808	-	100	59.231	ENSG00000163874	ZC3H12A	90	59.846	Homo_sapiens
ENSCVAG00000016808	-	87	59.735	ENSACIG00000006790	-	90	49.664	Amphilophus_citrinellus
ENSCVAG00000016808	-	92	56.846	ENSACIG00000004135	si:dkey-206d17.12	84	56.432	Amphilophus_citrinellus
ENSCVAG00000016808	-	98	84.170	ENSAOCG00000001288	-	95	84.556	Amphiprion_ocellaris
ENSCVAG00000016808	-	97	75.581	ENSAOCG00000003866	-	96	75.581	Amphiprion_ocellaris
ENSCVAG00000016808	-	87	59.740	ENSAOCG00000014326	-	85	59.735	Amphiprion_ocellaris
ENSCVAG00000016808	-	97	75.581	ENSAPEG00000005727	-	94	67.974	Amphiprion_percula
ENSCVAG00000016808	-	98	56.154	ENSAPEG00000021795	si:dkey-206d17.12	95	56.078	Amphiprion_percula
ENSCVAG00000016808	-	98	84.556	ENSAPEG00000022263	-	95	84.942	Amphiprion_percula
ENSCVAG00000016808	-	99	81.439	ENSATEG00000002260	-	94	81.439	Anabas_testudineus
ENSCVAG00000016808	-	86	59.375	ENSATEG00000013053	-	79	57.759	Anabas_testudineus
ENSCVAG00000016808	-	93	57.769	ENSATEG00000006140	si:dkey-206d17.12	86	47.682	Anabas_testudineus
ENSCVAG00000016808	-	100	59.770	ENSANAG00000009908	ZC3H12A	90	59.231	Aotus_nancymaae
ENSCVAG00000016808	-	89	61.304	ENSAMXG00000029641	si:dkey-206d17.12	76	61.304	Astyanax_mexicanus
ENSCVAG00000016808	-	100	61.364	ENSCATG00000037700	ZC3H12A	91	60.305	Cercocebus_atys
ENSCVAG00000016808	-	100	60.837	ENSCANG00000042287	ZC3H12A	91	59.924	Colobus_angolensis_palliatus
ENSCVAG00000016808	-	88	79.828	ENSCSEG00000010073	-	79	80.258	Cynoglossus_semilaevis
ENSCVAG00000016808	-	87	60.444	ENSDARG00000005271	zc3h12a	60	60.444	Danio_rerio
ENSCVAG00000016808	-	100	44.656	ENSETEG00000018311	ZC3H12A	52	44.656	Echinops_telfairi
ENSCVAG00000016808	-	88	79.741	ENSFHEG00000021225	-	83	69.281	Fundulus_heteroclitus
ENSCVAG00000016808	-	87	58.407	ENSGACG00000006636	-	69	56.769	Gasterosteus_aculeatus
ENSCVAG00000016808	-	87	60.088	ENSHBUG00000021584	-	93	54.618	Haplochromis_burtoni
ENSCVAG00000016808	-	95	54.032	ENSHCOG00000004255	si:dkey-206d17.12	96	52.066	Hippocampus_comes
ENSCVAG00000016808	-	97	75.591	ENSHCOG00000008878	-	63	65.089	Hippocampus_comes
ENSCVAG00000016808	-	57	49.324	ENSHCOG00000007306	-	84	47.297	Hippocampus_comes
ENSCVAG00000016808	-	88	58.079	ENSKMAG00000002156	ZC3H12A	84	58.590	Kryptolebias_marmoratus
ENSCVAG00000016808	-	98	83.268	ENSKMAG00000013285	-	96	83.268	Kryptolebias_marmoratus
ENSCVAG00000016808	-	88	82.684	ENSLBEG00000012554	-	84	72.667	Labrus_bergylta
ENSCVAG00000016808	-	88	53.947	ENSLBEG00000012121	-	92	42.138	Labrus_bergylta
ENSCVAG00000016808	-	100	61.364	ENSMFAG00000032647	ZC3H12A	91	60.305	Macaca_fascicularis
ENSCVAG00000016808	-	87	67.105	ENSMNEG00000040453	ZC3H12A	91	60.687	Macaca_nemestrina
ENSCVAG00000016808	-	100	61.364	ENSMLEG00000034570	ZC3H12A	91	60.305	Mandrillus_leucophaeus
ENSCVAG00000016808	-	96	54.331	ENSMAMG00000004463	-	91	53.968	Mastacembelus_armatus
ENSCVAG00000016808	-	97	75.097	ENSMAMG00000021794	-	93	75.097	Mastacembelus_armatus
ENSCVAG00000016808	-	98	84.252	ENSMZEG00005019137	-	90	78.947	Maylandia_zebra
ENSCVAG00000016808	-	93	56.800	ENSMZEG00005023410	ZC3H12A	84	56.800	Maylandia_zebra
ENSCVAG00000016808	-	97	73.152	ENSMMOG00000005728	-	86	68.027	Mola_mola
ENSCVAG00000016808	-	88	58.369	ENSMMOG00000000727	zc3h12a	85	47.368	Mola_mola
ENSCVAG00000016808	-	100	54.753	ENSMMOG00000014855	-	96	54.406	Mola_mola
ENSCVAG00000016808	-	100	60.755	MGP_SPRETEiJ_G0027441	Zc3h12a	92	60.305	Mus_spretus
ENSCVAG00000016808	-	98	83.858	ENSNBRG00000012175	-	90	78.947	Neolamprologus_brichardi
ENSCVAG00000016808	-	97	55.600	ENSNBRG00000010961	-	92	54.800	Neolamprologus_brichardi
ENSCVAG00000016808	-	100	59.770	ENSOCUG00000010856	ZC3H12A	66	59.770	Oryctolagus_cuniculus
ENSCVAG00000016808	-	94	56.693	ENSORLG00000009473	ZC3H12A	90	56.800	Oryzias_latipes
ENSCVAG00000016808	-	100	59.387	ENSOARG00000019760	ZC3H12A	59	59.387	Ovis_aries
ENSCVAG00000016808	-	100	58.687	ENSPPAG00000041054	ZC3H12A	90	59.846	Pan_paniscus
ENSCVAG00000016808	-	100	60.920	ENSPTIG00000012943	ZC3H12A	91	60.920	Panthera_tigris_altaica
ENSCVAG00000016808	-	100	58.687	ENSPTRG00000000544	ZC3H12A	90	59.846	Pan_troglodytes
ENSCVAG00000016808	-	100	61.364	ENSPANG00000011821	ZC3H12A	91	60.305	Papio_anubis
ENSCVAG00000016808	-	87	56.332	ENSPKIG00000019720	-	78	52.653	Paramormyrops_kingsleyae
ENSCVAG00000016808	-	87	57.576	ENSPMEG00000009279	-	88	58.079	Poecilia_mexicana
ENSCVAG00000016808	-	98	88.976	ENSPREG00000001607	-	76	90.598	Poecilia_reticulata
ENSCVAG00000016808	-	100	61.364	ENSRROG00000037444	ZC3H12A	91	60.305	Rhinopithecus_roxellana
ENSCVAG00000016808	-	98	81.538	ENSSDUG00000013237	-	91	76.000	Seriola_dumerili
ENSCVAG00000016808	-	87	59.735	ENSSDUG00000010581	-	84	58.590	Seriola_dumerili
ENSCVAG00000016808	-	95	54.167	ENSSLDG00000009317	si:dkey-206d17.12	93	54.688	Seriola_lalandi_dorsalis
ENSCVAG00000016808	-	96	75.099	ENSTNIG00000014519	-	96	75.099	Tetraodon_nigroviridis
ENSCVAG00000016808	-	88	58.079	ENSXCOG00000001538	-	94	48.125	Xiphophorus_couchianus
ENSCVAG00000016808	-	88	59.227	ENSXCOG00000008984	zc3h12a	90	45.860	Xiphophorus_couchianus
ENSCVAG00000016808	-	98	87.008	ENSXMAG00000014715	-	87	90.254	Xiphophorus_maculatus
ENSCVAG00000016808	-	88	58.079	ENSXMAG00000005023	-	94	48.125	Xiphophorus_maculatus