EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000016852 (Gene tree)
Gene ID: 107086396
Gene Symbol: larp7
Alias: fa10g04|wu:fa10g04|zgc:56476
Full Name: La ribonucleoprotein domain family member 7
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 16061 bases
Position: chrKL652651.1:161366-177426
Accession: 107086396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014186	RRM_1	PF00076.22	6.4e-21	1	1
ENSCVAP00000029216	RRM_1	PF00076.22	1.2e-18	1	1
ENSCVAP00000014186	RRM_3	PF08777.11	9.4e-29	1	1
ENSCVAP00000029216	La	PF05383.17	4.6e-22	1	1
ENSCVAP00000014186	La	PF05383.17	1.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031027	-	693	-	ENSCVAP00000029216	230 (aa)	-	-
ENSCVAT00000021938	-	1659	XM_015377297	ENSCVAP00000014186	552 (aa)	XP_015232783	-

Gene Model

Click here to download ENSCVAG00000016852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016852's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016852	larp7	80	73.224	ENSG00000174720	LARP7	87	66.071	Homo_sapiens
ENSCVAG00000016852	larp7	90	82.692	ENSAPOG00000014570	larp7	98	74.194	Acanthochromis_polyacanthus
ENSCVAG00000016852	larp7	80	73.770	ENSAMEG00000015642	LARP7	96	54.902	Ailuropoda_melanoleuca
ENSCVAG00000016852	larp7	92	84.834	ENSACIG00000023850	larp7	98	73.175	Amphilophus_citrinellus
ENSCVAG00000016852	larp7	90	82.212	ENSAOCG00000016160	larp7	98	74.731	Amphiprion_ocellaris
ENSCVAG00000016852	larp7	90	82.212	ENSAPEG00000021823	larp7	98	74.552	Amphiprion_percula
ENSCVAG00000016852	larp7	90	82.609	ENSATEG00000016238	larp7	99	73.357	Anabas_testudineus
ENSCVAG00000016852	larp7	79	77.473	ENSAPLG00000012887	LARP7	99	53.223	Anas_platyrhynchos
ENSCVAG00000016852	larp7	79	76.374	ENSACAG00000010662	LARP7	95	55.196	Anolis_carolinensis
ENSCVAG00000016852	larp7	80	73.224	ENSANAG00000031139	-	96	54.466	Aotus_nancymaae
ENSCVAG00000016852	larp7	94	45.455	ENSANAG00000022318	-	96	45.326	Aotus_nancymaae
ENSCVAG00000016852	larp7	89	83.415	ENSACLG00000023184	larp7	98	74.419	Astatotilapia_calliptera
ENSCVAG00000016852	larp7	88	68.966	ENSAMXG00000002549	larp7	99	57.766	Astyanax_mexicanus
ENSCVAG00000016852	larp7	80	73.224	ENSBTAG00000009632	LARP7	94	54.641	Bos_taurus
ENSCVAG00000016852	larp7	80	73.224	ENSCJAG00000003711	LARP7	96	54.991	Callithrix_jacchus
ENSCVAG00000016852	larp7	80	73.370	ENSCAFG00000011715	LARP7	96	52.891	Canis_familiaris
ENSCVAG00000016852	larp7	80	73.370	ENSCAFG00020017225	LARP7	96	53.767	Canis_lupus_dingo
ENSCVAG00000016852	larp7	80	73.224	ENSCHIG00000014163	-	96	55.088	Capra_hircus
ENSCVAG00000016852	larp7	89	65.686	ENSCHIG00000013971	-	96	51.158	Capra_hircus
ENSCVAG00000016852	larp7	94	49.444	ENSTSYG00000035188	-	98	49.444	Carlito_syrichta
ENSCVAG00000016852	larp7	80	73.770	ENSTSYG00000006769	-	97	53.846	Carlito_syrichta
ENSCVAG00000016852	larp7	94	47.706	ENSCAPG00000009328	LARP7	97	48.188	Cavia_aperea
ENSCVAG00000016852	larp7	80	73.770	ENSCPOG00000011830	LARP7	97	53.750	Cavia_porcellus
ENSCVAG00000016852	larp7	80	73.224	ENSCCAG00000026787	-	96	55.692	Cebus_capucinus
ENSCVAG00000016852	larp7	80	66.120	ENSCCAG00000023563	-	99	51.941	Cebus_capucinus
ENSCVAG00000016852	larp7	80	73.224	ENSCATG00000043535	LARP7	96	55.888	Cercocebus_atys
ENSCVAG00000016852	larp7	80	73.770	ENSCLAG00000005894	LARP7	97	54.594	Chinchilla_lanigera
ENSCVAG00000016852	larp7	80	73.224	ENSCSAG00000003810	LARP7	96	56.063	Chlorocebus_sabaeus
ENSCVAG00000016852	larp7	80	73.770	ENSCHOG00000002379	-	97	54.674	Choloepus_hoffmanni
ENSCVAG00000016852	larp7	91	47.874	ENSCHOG00000008967	-	99	48.429	Choloepus_hoffmanni
ENSCVAG00000016852	larp7	79	75.275	ENSCPBG00000004919	LARP7	98	55.517	Chrysemys_picta_bellii
ENSCVAG00000016852	larp7	80	73.224	ENSCANG00000031482	LARP7	95	56.063	Colobus_angolensis_palliatus
ENSCVAG00000016852	larp7	78	73.889	ENSCGRG00001025050	-	96	55.596	Cricetulus_griseus_chok1gshd
ENSCVAG00000016852	larp7	80	69.945	ENSCGRG00001012747	-	96	48.971	Cricetulus_griseus_chok1gshd
ENSCVAG00000016852	larp7	78	73.889	ENSCGRG00000001141	-	96	50.186	Cricetulus_griseus_crigri
ENSCVAG00000016852	larp7	80	69.945	ENSCGRG00000007642	-	95	51.451	Cricetulus_griseus_crigri
ENSCVAG00000016852	larp7	96	69.104	ENSCSEG00000009088	larp7	96	69.104	Cynoglossus_semilaevis
ENSCVAG00000016852	larp7	88	71.429	ENSDARG00000017315	larp7	98	56.128	Danio_rerio
ENSCVAG00000016852	larp7	80	73.913	ENSDNOG00000013761	LARP7	98	54.110	Dasypus_novemcinctus
ENSCVAG00000016852	larp7	80	74.317	ENSDORG00000008896	-	97	54.902	Dipodomys_ordii
ENSCVAG00000016852	larp7	73	39.286	FBgn0260771	Larp7	54	38.150	Drosophila_melanogaster
ENSCVAG00000016852	larp7	80	73.224	ENSETEG00000011692	LARP7	96	56.093	Echinops_telfairi
ENSCVAG00000016852	larp7	86	54.500	ENSEBUG00000013808	larp7	96	38.772	Eptatretus_burgeri
ENSCVAG00000016852	larp7	80	73.224	ENSEASG00005005592	LARP7	96	55.263	Equus_asinus_asinus
ENSCVAG00000016852	larp7	80	73.224	ENSECAG00000000834	LARP7	96	55.263	Equus_caballus
ENSCVAG00000016852	larp7	80	73.770	ENSEEUG00000012824	LARP7	97	55.307	Erinaceus_europaeus
ENSCVAG00000016852	larp7	80	79.235	ENSELUG00000015341	larp7	93	74.286	Esox_lucius
ENSCVAG00000016852	larp7	80	73.913	ENSFCAG00000031966	LARP7	96	54.561	Felis_catus
ENSCVAG00000016852	larp7	79	78.022	ENSFALG00000000972	LARP7	95	56.522	Ficedula_albicollis
ENSCVAG00000016852	larp7	89	71.569	ENSFDAG00000014048	-	99	53.697	Fukomys_damarensis
ENSCVAG00000016852	larp7	89	63.902	ENSFDAG00000011855	-	97	50.000	Fukomys_damarensis
ENSCVAG00000016852	larp7	92	88.679	ENSFHEG00000021652	larp7	98	82.396	Fundulus_heteroclitus
ENSCVAG00000016852	larp7	91	66.667	ENSGMOG00000010536	larp7	97	60.329	Gadus_morhua
ENSCVAG00000016852	larp7	79	76.923	ENSGALG00000012048	LARP7	96	55.633	Gallus_gallus
ENSCVAG00000016852	larp7	92	91.981	ENSGAFG00000015400	larp7	98	85.870	Gambusia_affinis
ENSCVAG00000016852	larp7	93	74.419	ENSGACG00000019618	larp7	94	74.419	Gasterosteus_aculeatus
ENSCVAG00000016852	larp7	79	75.275	ENSGAGG00000024520	LARP7	99	54.545	Gopherus_agassizii
ENSCVAG00000016852	larp7	80	73.224	ENSGGOG00000023567	-	96	55.965	Gorilla_gorilla
ENSCVAG00000016852	larp7	83	54.582	ENSGGOG00000006438	-	95	54.183	Gorilla_gorilla
ENSCVAG00000016852	larp7	89	83.415	ENSHBUG00000019223	larp7	98	74.240	Haplochromis_burtoni
ENSCVAG00000016852	larp7	90	69.417	ENSHGLG00000002716	LARP7	99	52.686	Heterocephalus_glaber_female
ENSCVAG00000016852	larp7	90	69.417	ENSHGLG00100000332	LARP7	99	52.686	Heterocephalus_glaber_male
ENSCVAG00000016852	larp7	87	81.000	ENSHCOG00000000664	LARP7	97	68.097	Hippocampus_comes
ENSCVAG00000016852	larp7	88	75.248	ENSIPUG00000019886	larp7	99	58.763	Ictalurus_punctatus
ENSCVAG00000016852	larp7	80	73.770	ENSSTOG00000011789	LARP7	97	55.342	Ictidomys_tridecemlineatus
ENSCVAG00000016852	larp7	80	73.770	ENSJJAG00000000257	-	97	55.634	Jaculus_jaculus
ENSCVAG00000016852	larp7	93	81.308	ENSKMAG00000005057	larp7	98	71.480	Kryptolebias_marmoratus
ENSCVAG00000016852	larp7	88	76.961	ENSLBEG00000018789	-	89	76.961	Labrus_bergylta
ENSCVAG00000016852	larp7	97	68.739	ENSLBEG00000020062	larp7	97	68.561	Labrus_bergylta
ENSCVAG00000016852	larp7	93	57.209	ENSLACG00000013744	LARP7	99	50.658	Latimeria_chalumnae
ENSCVAG00000016852	larp7	94	50.772	ENSLOCG00000011608	larp7	96	50.423	Lepisosteus_oculatus
ENSCVAG00000016852	larp7	80	73.770	ENSLAFG00000015769	LARP7	96	55.830	Loxodonta_africana
ENSCVAG00000016852	larp7	80	73.224	ENSMFAG00000036506	LARP7	96	55.888	Macaca_fascicularis
ENSCVAG00000016852	larp7	80	73.224	ENSMMUG00000017911	LARP7	96	55.888	Macaca_mulatta
ENSCVAG00000016852	larp7	80	73.224	ENSMNEG00000034758	LARP7	99	54.510	Macaca_nemestrina
ENSCVAG00000016852	larp7	80	73.224	ENSMLEG00000026154	LARP7	96	56.063	Mandrillus_leucophaeus
ENSCVAG00000016852	larp7	91	79.524	ENSMAMG00000005835	larp7	98	71.786	Mastacembelus_armatus
ENSCVAG00000016852	larp7	89	83.415	ENSMZEG00005002084	larp7	98	74.419	Maylandia_zebra
ENSCVAG00000016852	larp7	79	76.923	ENSMGAG00000010947	LARP7	97	55.654	Meleagris_gallopavo
ENSCVAG00000016852	larp7	78	74.444	ENSMAUG00000005625	-	96	47.653	Mesocricetus_auratus
ENSCVAG00000016852	larp7	80	73.770	ENSMICG00000031035	LARP7	96	55.009	Microcebus_murinus
ENSCVAG00000016852	larp7	78	73.889	ENSMOCG00000012519	-	97	54.225	Microtus_ochrogaster
ENSCVAG00000016852	larp7	88	51.931	ENSMOCG00000015761	-	100	53.635	Microtus_ochrogaster
ENSCVAG00000016852	larp7	97	75.330	ENSMMOG00000011816	larp7	92	75.330	Mola_mola
ENSCVAG00000016852	larp7	80	74.863	ENSMODG00000005669	LARP7	97	53.553	Monodelphis_domestica
ENSCVAG00000016852	larp7	86	84.772	ENSMALG00000009893	larp7	85	84.772	Monopterus_albus
ENSCVAG00000016852	larp7	78	73.333	MGP_CAROLIEiJ_G0025613	-	96	52.014	Mus_caroli
ENSCVAG00000016852	larp7	78	73.333	ENSMUSG00000027968	Larp7	99	59.494	Mus_musculus
ENSCVAG00000016852	larp7	78	73.333	MGP_PahariEiJ_G0027060	-	96	54.352	Mus_pahari
ENSCVAG00000016852	larp7	78	73.889	MGP_SPRETEiJ_G0026566	Larp7	97	54.145	Mus_spretus
ENSCVAG00000016852	larp7	78	72.778	ENSMPUG00000018052	-	100	54.749	Mustela_putorius_furo
ENSCVAG00000016852	larp7	80	74.317	ENSMPUG00000008331	-	96	56.063	Mustela_putorius_furo
ENSCVAG00000016852	larp7	84	53.242	ENSMLUG00000027214	LARP7	99	53.113	Myotis_lucifugus
ENSCVAG00000016852	larp7	93	80.374	ENSNBRG00000007968	larp7	86	80.374	Neolamprologus_brichardi
ENSCVAG00000016852	larp7	80	73.224	ENSNLEG00000016354	LARP7	95	55.888	Nomascus_leucogenys
ENSCVAG00000016852	larp7	70	74.534	ENSMEUG00000004739	LARP7	100	52.816	Notamacropus_eugenii
ENSCVAG00000016852	larp7	85	63.359	ENSOPRG00000009594	-	86	63.359	Ochotona_princeps
ENSCVAG00000016852	larp7	80	73.770	ENSODEG00000011121	LARP7	95	53.676	Octodon_degus
ENSCVAG00000016852	larp7	94	75.138	ENSONIG00000008763	larp7	98	74.643	Oreochromis_niloticus
ENSCVAG00000016852	larp7	79	75.275	ENSOANG00000009298	LARP7	96	54.828	Ornithorhynchus_anatinus
ENSCVAG00000016852	larp7	80	73.770	ENSOCUG00000007073	LARP7	97	53.274	Oryctolagus_cuniculus
ENSCVAG00000016852	larp7	94	70.857	ENSORLG00000004978	larp7	98	70.111	Oryzias_latipes
ENSCVAG00000016852	larp7	94	71.048	ENSORLG00020013825	larp7	98	70.166	Oryzias_latipes_hni
ENSCVAG00000016852	larp7	80	82.703	ENSORLG00015011435	larp7	88	79.048	Oryzias_latipes_hsok
ENSCVAG00000016852	larp7	90	81.159	ENSOMEG00000006920	larp7	98	70.092	Oryzias_melastigma
ENSCVAG00000016852	larp7	80	73.770	ENSOGAG00000001643	LARP7	96	54.246	Otolemur_garnettii
ENSCVAG00000016852	larp7	80	73.224	ENSOARG00000001809	LARP7	96	53.659	Ovis_aries
ENSCVAG00000016852	larp7	80	73.224	ENSPPAG00000038420	LARP7	95	55.634	Pan_paniscus
ENSCVAG00000016852	larp7	80	73.913	ENSPPRG00000023256	LARP7	96	54.885	Panthera_pardus
ENSCVAG00000016852	larp7	80	73.913	ENSPTIG00000021146	LARP7	93	54.529	Panthera_tigris_altaica
ENSCVAG00000016852	larp7	80	73.224	ENSPTRG00000016380	LARP7	96	55.965	Pan_troglodytes
ENSCVAG00000016852	larp7	80	73.224	ENSPANG00000006701	LARP7	95	55.965	Papio_anubis
ENSCVAG00000016852	larp7	89	76.214	ENSPKIG00000023484	larp7	99	62.847	Paramormyrops_kingsleyae
ENSCVAG00000016852	larp7	84	73.057	ENSPSIG00000014419	LARP7	97	55.403	Pelodiscus_sinensis
ENSCVAG00000016852	larp7	83	78.421	ENSPMGG00000019887	larp7	92	78.109	Periophthalmus_magnuspinnatus
ENSCVAG00000016852	larp7	83	53.403	ENSPMAG00000005362	larp7	95	37.434	Petromyzon_marinus
ENSCVAG00000016852	larp7	80	74.863	ENSPCIG00000020284	LARP7	96	60.000	Phascolarctos_cinereus
ENSCVAG00000016852	larp7	97	85.778	ENSPFOG00000000265	larp7	98	83.725	Poecilia_formosa
ENSCVAG00000016852	larp7	92	90.094	ENSPLAG00000012181	larp7	98	83.725	Poecilia_latipinna
ENSCVAG00000016852	larp7	92	90.094	ENSPMEG00000007182	larp7	98	83.725	Poecilia_mexicana
ENSCVAG00000016852	larp7	90	92.308	ENSPREG00000019513	larp7	98	83.544	Poecilia_reticulata
ENSCVAG00000016852	larp7	80	73.224	ENSPPYG00000015010	LARP7	96	55.965	Pongo_abelii
ENSCVAG00000016852	larp7	80	73.770	ENSPCOG00000023946	LARP7	86	75.510	Propithecus_coquereli
ENSCVAG00000016852	larp7	90	67.308	ENSPVAG00000000282	LARP7	98	52.586	Pteropus_vampyrus
ENSCVAG00000016852	larp7	93	79.907	ENSPNYG00000023801	larp7	86	79.907	Pundamilia_nyererei
ENSCVAG00000016852	larp7	94	61.949	ENSPNAG00000017554	larp7	96	61.706	Pygocentrus_nattereri
ENSCVAG00000016852	larp7	78	73.889	ENSRNOG00000048989	Larp7	96	52.973	Rattus_norvegicus
ENSCVAG00000016852	larp7	80	73.224	ENSRBIG00000031916	LARP7	95	53.579	Rhinopithecus_bieti
ENSCVAG00000016852	larp7	80	73.224	ENSRROG00000033414	LARP7	96	56.063	Rhinopithecus_roxellana
ENSCVAG00000016852	larp7	80	73.224	ENSSBOG00000030886	-	96	55.692	Saimiri_boliviensis_boliviensis
ENSCVAG00000016852	larp7	94	43.446	ENSSBOG00000022652	-	98	43.321	Saimiri_boliviensis_boliviensis
ENSCVAG00000016852	larp7	91	73.460	ENSSFOG00015019344	larp7	96	63.702	Scleropages_formosus
ENSCVAG00000016852	larp7	93	78.241	ENSSMAG00000011296	larp7	98	72.383	Scophthalmus_maximus
ENSCVAG00000016852	larp7	90	83.092	ENSSDUG00000007045	larp7	99	73.619	Seriola_dumerili
ENSCVAG00000016852	larp7	90	83.092	ENSSLDG00000005128	larp7	95	81.221	Seriola_lalandi_dorsalis
ENSCVAG00000016852	larp7	50	46.254	ENSSARG00000000190	-	99	46.815	Sorex_araneus
ENSCVAG00000016852	larp7	90	82.212	ENSSPAG00000016066	larp7	99	73.063	Stegastes_partitus
ENSCVAG00000016852	larp7	80	73.770	ENSSSCG00000009119	LARP7	96	54.306	Sus_scrofa
ENSCVAG00000016852	larp7	79	78.022	ENSTGUG00000001804	LARP7	97	56.491	Taeniopygia_guttata
ENSCVAG00000016852	larp7	87	76.000	ENSTRUG00000004996	larp7	99	64.022	Takifugu_rubripes
ENSCVAG00000016852	larp7	80	74.457	ENSTNIG00000007183	larp7	97	58.759	Tetraodon_nigroviridis
ENSCVAG00000016852	larp7	80	72.678	ENSTBEG00000009188	LARP7	96	52.837	Tupaia_belangeri
ENSCVAG00000016852	larp7	88	51.613	ENSTTRG00000005233	LARP7	99	52.099	Tursiops_truncatus
ENSCVAG00000016852	larp7	80	74.317	ENSUAMG00000000836	LARP7	96	54.626	Ursus_americanus
ENSCVAG00000016852	larp7	80	74.317	ENSUMAG00000002263	LARP7	95	53.957	Ursus_maritimus
ENSCVAG00000016852	larp7	80	73.770	ENSVPAG00000010502	LARP7	96	54.895	Vicugna_pacos
ENSCVAG00000016852	larp7	80	73.370	ENSVVUG00000002274	LARP7	97	53.322	Vulpes_vulpes
ENSCVAG00000016852	larp7	84	74.093	ENSXETG00000024097	larp7	96	55.148	Xenopus_tropicalis
ENSCVAG00000016852	larp7	92	92.453	ENSXCOG00000004883	larp7	97	92.453	Xiphophorus_couchianus
ENSCVAG00000016852	larp7	92	92.453	ENSXMAG00000008479	larp7	98	85.895	Xiphophorus_maculatus