EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000016868 (Gene tree)
Gene ID: 107104181
Gene Symbol: -
Alias: -
Full Name: prolyl 3-hydroxylase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 28487 bases
Position: chrKL654140.1:14171-42657
Accession: 107104181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014236	2OG-FeII_Oxy	PF03171.20	6.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022007	-	2220	XM_015404125	ENSCVAP00000014236	739 (aa)	XP_015259611	-

Gene Model

Click here to download ENSCVAG00000016868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000016868	-	89	43.741	ENSCVAG00000020470	p3h2	99	43.741
ENSCVAG00000016868	-	88	39.768	ENSCVAG00000000837	p3h3	91	39.768

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016868	-	86	58.041	ENSG00000117385	P3H1	98	57.456	Homo_sapiens
ENSCVAG00000016868	-	92	74.348	ENSAPOG00000007518	p3h1	92	70.626	Acanthochromis_polyacanthus
ENSCVAG00000016868	-	84	56.672	ENSAMEG00000002135	P3H1	92	56.672	Ailuropoda_melanoleuca
ENSCVAG00000016868	-	87	74.819	ENSACIG00000000341	p3h1	99	74.819	Amphilophus_citrinellus
ENSCVAG00000016868	-	87	76.822	ENSAOCG00000006009	p3h1	99	76.822	Amphiprion_ocellaris
ENSCVAG00000016868	-	87	76.822	ENSAPEG00000018038	p3h1	99	76.822	Amphiprion_percula
ENSCVAG00000016868	-	98	69.250	ENSATEG00000004872	p3h1	94	70.596	Anabas_testudineus
ENSCVAG00000016868	-	68	61.510	ENSAPLG00000004260	P3H1	94	61.510	Anas_platyrhynchos
ENSCVAG00000016868	-	79	58.583	ENSANAG00000033369	P3H1	97	61.207	Aotus_nancymaae
ENSCVAG00000016868	-	96	60.313	ENSAMXG00000003540	p3h1	85	60.313	Astyanax_mexicanus
ENSCVAG00000016868	-	90	56.145	ENSBTAG00000017382	P3H1	96	56.145	Bos_taurus
ENSCVAG00000016868	-	57	67.188	ENSCJAG00000003216	-	87	67.188	Callithrix_jacchus
ENSCVAG00000016868	-	88	56.466	ENSCAFG00000002526	P3H1	94	56.348	Canis_familiaris
ENSCVAG00000016868	-	88	57.267	ENSCAFG00020002341	P3H1	94	57.965	Canis_lupus_dingo
ENSCVAG00000016868	-	87	57.598	ENSCHIG00000008788	P3H1	97	55.740	Capra_hircus
ENSCVAG00000016868	-	90	55.989	ENSTSYG00000002325	P3H1	96	55.989	Carlito_syrichta
ENSCVAG00000016868	-	67	60.074	ENSCAPG00000007750	P3H1	88	60.074	Cavia_aperea
ENSCVAG00000016868	-	84	58.309	ENSCPOG00000021271	P3H1	93	57.102	Cavia_porcellus
ENSCVAG00000016868	-	90	56.067	ENSCCAG00000037767	P3H1	96	56.067	Cebus_capucinus
ENSCVAG00000016868	-	87	57.765	ENSCATG00000021814	P3H1	96	56.522	Cercocebus_atys
ENSCVAG00000016868	-	84	58.605	ENSCLAG00000002493	P3H1	94	57.183	Chinchilla_lanigera
ENSCVAG00000016868	-	87	57.826	ENSCSAG00000001170	P3H1	96	56.583	Chlorocebus_sabaeus
ENSCVAG00000016868	-	90	57.932	ENSCPBG00000009965	P3H1	98	57.932	Chrysemys_picta_bellii
ENSCVAG00000016868	-	76	60.465	ENSCANG00000036285	P3H1	97	60.465	Colobus_angolensis_palliatus
ENSCVAG00000016868	-	85	58.260	ENSCGRG00001014713	P3h1	91	58.260	Cricetulus_griseus_chok1gshd
ENSCVAG00000016868	-	80	59.219	ENSCGRG00000001110	P3h1	94	60.113	Cricetulus_griseus_crigri
ENSCVAG00000016868	-	87	63.663	ENSCSEG00000016927	p3h1	91	59.533	Cynoglossus_semilaevis
ENSCVAG00000016868	-	84	58.445	ENSDNOG00000025080	P3H1	94	56.776	Dasypus_novemcinctus
ENSCVAG00000016868	-	86	53.648	ENSDORG00000011264	P3h1	95	53.977	Dipodomys_ordii
ENSCVAG00000016868	-	88	45.758	ENSEBUG00000002855	p3h1	95	45.758	Eptatretus_burgeri
ENSCVAG00000016868	-	85	51.347	ENSEBUG00000011522	p3h1	94	51.347	Eptatretus_burgeri
ENSCVAG00000016868	-	86	58.297	ENSEASG00005001292	P3H1	96	56.982	Equus_asinus_asinus
ENSCVAG00000016868	-	86	58.297	ENSECAG00000022675	P3H1	95	56.738	Equus_caballus
ENSCVAG00000016868	-	90	70.355	ENSELUG00000013026	p3h1	97	70.944	Esox_lucius
ENSCVAG00000016868	-	86	57.918	ENSFCAG00000012192	P3H1	90	56.374	Felis_catus
ENSCVAG00000016868	-	84	56.607	ENSFALG00000010338	P3H1	91	56.607	Ficedula_albicollis
ENSCVAG00000016868	-	75	60.531	ENSFDAG00000007690	P3H1	94	60.266	Fukomys_damarensis
ENSCVAG00000016868	-	92	62.897	ENSGMOG00000002648	p3h1	99	62.897	Gadus_morhua
ENSCVAG00000016868	-	84	59.760	ENSGALG00000004833	P3H1	90	59.760	Gallus_gallus
ENSCVAG00000016868	-	95	76.323	ENSGAFG00000006944	p3h1	92	76.084	Gambusia_affinis
ENSCVAG00000016868	-	93	70.204	ENSGACG00000011029	p3h1	99	71.814	Gasterosteus_aculeatus
ENSCVAG00000016868	-	89	58.464	ENSGAGG00000022900	P3H1	99	57.359	Gopherus_agassizii
ENSCVAG00000016868	-	71	59.298	ENSGGOG00000005745	-	92	56.410	Gorilla_gorilla
ENSCVAG00000016868	-	99	68.869	ENSHBUG00000023670	p3h1	92	68.869	Haplochromis_burtoni
ENSCVAG00000016868	-	84	58.867	ENSHGLG00000019499	P3H1	90	58.867	Heterocephalus_glaber_female
ENSCVAG00000016868	-	84	56.203	ENSHGLG00100013596	P3H1	94	60.456	Heterocephalus_glaber_male
ENSCVAG00000016868	-	87	64.723	ENSHCOG00000009240	p3h1	93	64.723	Hippocampus_comes
ENSCVAG00000016868	-	86	68.935	ENSIPUG00000003436	p3h1	97	68.935	Ictalurus_punctatus
ENSCVAG00000016868	-	91	56.293	ENSSTOG00000000119	P3H1	97	56.467	Ictidomys_tridecemlineatus
ENSCVAG00000016868	-	89	56.472	ENSJJAG00000011354	P3h1	93	58.420	Jaculus_jaculus
ENSCVAG00000016868	-	98	70.155	ENSKMAG00000006691	p3h1	93	70.155	Kryptolebias_marmoratus
ENSCVAG00000016868	-	94	70.683	ENSLBEG00000008795	p3h1	83	70.683	Labrus_bergylta
ENSCVAG00000016868	-	78	58.758	ENSLACG00000000536	P3H1	97	58.758	Latimeria_chalumnae
ENSCVAG00000016868	-	90	64.754	ENSLOCG00000000935	p3h1	93	64.754	Lepisosteus_oculatus
ENSCVAG00000016868	-	84	59.043	ENSLAFG00000031418	P3H1	94	57.102	Loxodonta_africana
ENSCVAG00000016868	-	87	57.765	ENSMFAG00000042833	P3H1	96	56.522	Macaca_fascicularis
ENSCVAG00000016868	-	86	56.932	ENSMMUG00000022381	P3H1	96	55.698	Macaca_mulatta
ENSCVAG00000016868	-	91	56.625	ENSMNEG00000028256	P3H1	97	56.625	Macaca_nemestrina
ENSCVAG00000016868	-	90	56.522	ENSMLEG00000034003	P3H1	96	56.522	Mandrillus_leucophaeus
ENSCVAG00000016868	-	96	71.391	ENSMAMG00000023544	p3h1	90	71.391	Mastacembelus_armatus
ENSCVAG00000016868	-	99	68.996	ENSMZEG00005007416	p3h1	92	68.996	Maylandia_zebra
ENSCVAG00000016868	-	61	61.414	ENSMGAG00000006828	P3H1	93	61.414	Meleagris_gallopavo
ENSCVAG00000016868	-	85	58.382	ENSMAUG00000021789	P3h1	91	58.382	Mesocricetus_auratus
ENSCVAG00000016868	-	86	58.345	ENSMICG00000015012	P3H1	96	56.745	Microcebus_murinus
ENSCVAG00000016868	-	84	58.667	ENSMOCG00000016299	P3h1	94	57.021	Microtus_ochrogaster
ENSCVAG00000016868	-	84	73.534	ENSMMOG00000010002	p3h1	89	73.534	Mola_mola
ENSCVAG00000016868	-	86	57.642	ENSMODG00000017171	P3H1	94	57.856	Monodelphis_domestica
ENSCVAG00000016868	-	96	72.884	ENSMALG00000005865	p3h1	91	71.984	Monopterus_albus
ENSCVAG00000016868	-	84	58.580	MGP_CAROLIEiJ_G0026394	P3h1	94	60.456	Mus_caroli
ENSCVAG00000016868	-	84	58.876	ENSMUSG00000028641	P3h1	94	60.837	Mus_musculus
ENSCVAG00000016868	-	84	58.605	MGP_PahariEiJ_G0028723	P3h1	94	60.496	Mus_pahari
ENSCVAG00000016868	-	84	58.876	MGP_SPRETEiJ_G0027371	P3h1	93	73.206	Mus_spretus
ENSCVAG00000016868	-	84	58.185	ENSMPUG00000013834	P3H1	94	56.609	Mustela_putorius_furo
ENSCVAG00000016868	-	85	58.432	ENSMLUG00000013602	P3H1	97	56.899	Myotis_lucifugus
ENSCVAG00000016868	-	87	58.009	ENSNGAG00000011079	P3h1	95	58.009	Nannospalax_galili
ENSCVAG00000016868	-	84	57.926	ENSMEUG00000010224	P3H1	85	58.621	Notamacropus_eugenii
ENSCVAG00000016868	-	83	57.622	ENSOPRG00000008068	P3H1	90	56.186	Ochotona_princeps
ENSCVAG00000016868	-	85	58.850	ENSODEG00000001470	P3H1	94	58.850	Octodon_degus
ENSCVAG00000016868	-	93	72.988	ENSONIG00000003352	p3h1	99	72.988	Oreochromis_niloticus
ENSCVAG00000016868	-	66	50.191	ENSOANG00000009375	-	90	50.191	Ornithorhynchus_anatinus
ENSCVAG00000016868	-	86	58.651	ENSOCUG00000005602	P3H1	96	56.863	Oryctolagus_cuniculus
ENSCVAG00000016868	-	99	69.949	ENSORLG00000012560	p3h1	75	69.949	Oryzias_latipes
ENSCVAG00000016868	-	99	69.632	ENSORLG00020002201	p3h1	86	69.632	Oryzias_latipes_hni
ENSCVAG00000016868	-	99	69.860	ENSORLG00015018775	p3h1	74	69.860	Oryzias_latipes_hsok
ENSCVAG00000016868	-	100	69.328	ENSOMEG00000023842	p3h1	86	69.328	Oryzias_melastigma
ENSCVAG00000016868	-	90	55.540	ENSOGAG00000025285	P3H1	96	55.540	Otolemur_garnettii
ENSCVAG00000016868	-	87	57.453	ENSOARG00000020454	P3H1	97	55.602	Ovis_aries
ENSCVAG00000016868	-	86	58.041	ENSPPAG00000041313	P3H1	96	56.461	Pan_paniscus
ENSCVAG00000016868	-	84	58.482	ENSPPRG00000012621	P3H1	97	57.375	Panthera_pardus
ENSCVAG00000016868	-	73	56.218	ENSPTIG00000010953	P3H1	95	56.218	Panthera_tigris_altaica
ENSCVAG00000016868	-	86	57.895	ENSPTRG00000000617	P3H1	96	56.320	Pan_troglodytes
ENSCVAG00000016868	-	87	57.765	ENSPANG00000024088	P3H1	96	56.522	Papio_anubis
ENSCVAG00000016868	-	96	66.842	ENSPMGG00000009602	p3h1	97	65.024	Periophthalmus_magnuspinnatus
ENSCVAG00000016868	-	86	58.150	ENSPEMG00000001330	P3h1	95	56.540	Peromyscus_maniculatus_bairdii
ENSCVAG00000016868	-	86	57.536	ENSPCIG00000009135	P3H1	85	57.720	Phascolarctos_cinereus
ENSCVAG00000016868	-	95	76.587	ENSPFOG00000003235	p3h1	91	76.416	Poecilia_formosa
ENSCVAG00000016868	-	95	76.455	ENSPLAG00000022310	p3h1	98	77.452	Poecilia_latipinna
ENSCVAG00000016868	-	95	76.323	ENSPMEG00000013506	p3h1	91	76.153	Poecilia_mexicana
ENSCVAG00000016868	-	95	75.661	ENSPREG00000019520	p3h1	91	75.626	Poecilia_reticulata
ENSCVAG00000016868	-	67	59.369	ENSPPYG00000001464	-	96	59.369	Pongo_abelii
ENSCVAG00000016868	-	86	57.765	ENSPCOG00000013340	P3H1	96	56.033	Propithecus_coquereli
ENSCVAG00000016868	-	83	58.548	ENSPVAG00000017479	P3H1	82	58.548	Pteropus_vampyrus
ENSCVAG00000016868	-	99	68.742	ENSPNYG00000006270	p3h1	92	68.742	Pundamilia_nyererei
ENSCVAG00000016868	-	96	62.581	ENSPNAG00000011053	p3h1	85	62.289	Pygocentrus_nattereri
ENSCVAG00000016868	-	84	59.077	ENSRNOG00000053991	P3h1	94	57.123	Rattus_norvegicus
ENSCVAG00000016868	-	87	57.826	ENSRBIG00000034851	P3H1	96	56.583	Rhinopithecus_bieti
ENSCVAG00000016868	-	87	57.826	ENSRROG00000038286	P3H1	96	56.583	Rhinopithecus_roxellana
ENSCVAG00000016868	-	90	56.206	ENSSBOG00000029700	P3H1	92	57.184	Saimiri_boliviensis_boliviensis
ENSCVAG00000016868	-	78	60.160	ENSSHAG00000014745	P3H1	96	60.160	Sarcophilus_harrisii
ENSCVAG00000016868	-	87	68.375	ENSSFOG00015001878	p3h1	78	68.375	Scleropages_formosus
ENSCVAG00000016868	-	84	73.913	ENSSMAG00000002515	p3h1	98	73.032	Scophthalmus_maximus
ENSCVAG00000016868	-	95	72.405	ENSSDUG00000009645	p3h1	91	71.063	Seriola_dumerili
ENSCVAG00000016868	-	95	72.536	ENSSLDG00000015970	p3h1	91	71.191	Seriola_lalandi_dorsalis
ENSCVAG00000016868	-	83	59.513	ENSSPUG00000004838	P3H1	99	58.235	Sphenodon_punctatus
ENSCVAG00000016868	-	94	74.054	ENSSPAG00000017674	p3h1	86	75.034	Stegastes_partitus
ENSCVAG00000016868	-	86	58.235	ENSSSCG00000023920	P3H1	98	57.018	Sus_scrofa
ENSCVAG00000016868	-	99	65.732	ENSTRUG00000001367	p3h1	92	65.732	Takifugu_rubripes
ENSCVAG00000016868	-	87	67.816	ENSTNIG00000007385	p3h1	98	67.816	Tetraodon_nigroviridis
ENSCVAG00000016868	-	83	55.183	ENSTBEG00000015860	P3H1	88	53.598	Tupaia_belangeri
ENSCVAG00000016868	-	84	58.185	ENSUAMG00000000484	P3H1	94	56.753	Ursus_americanus
ENSCVAG00000016868	-	74	61.538	ENSUMAG00000024377	P3H1	94	61.538	Ursus_maritimus
ENSCVAG00000016868	-	87	57.833	ENSVVUG00000001729	P3H1	97	57.833	Vulpes_vulpes
ENSCVAG00000016868	-	73	60.342	ENSXETG00000004746	p3h1	90	60.342	Xenopus_tropicalis
ENSCVAG00000016868	-	86	79.265	ENSXCOG00000009351	p3h1	98	79.265	Xiphophorus_couchianus
ENSCVAG00000016868	-	95	76.190	ENSXMAG00000002601	p3h1	92	76.347	Xiphophorus_maculatus