EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000016988 (Gene tree)
Gene ID: 107099906
Gene Symbol: si:dkey-24l11.2
Alias: -
Full Name: uncharacterized LOC107099906
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4588 bases
Position: chrKL653418.1:298145-302732
Accession: 107099906
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014361	zf-CCCH	PF00642.24	8.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022185	-	2403	XM_015398207	ENSCVAP00000014361	658 (aa)	XP_015253693	UPI000742ADDA

Gene Model

Click here to download ENSCVAG00000016988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000016988's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000016988	si:dkey-24l11.2	60	65.835	ENSAPOG00000009246	-	99	65.835	Acanthochromis_polyacanthus
ENSCVAG00000016988	si:dkey-24l11.2	60	67.176	ENSACIG00000000516	-	100	66.829	Amphilophus_citrinellus
ENSCVAG00000016988	si:dkey-24l11.2	62	65.610	ENSAOCG00000003240	-	92	65.610	Amphiprion_ocellaris
ENSCVAG00000016988	si:dkey-24l11.2	98	71.450	ENSATEG00000006680	si:dkey-24l11.2	98	71.450	Anabas_testudineus
ENSCVAG00000016988	si:dkey-24l11.2	62	64.951	ENSACLG00000019918	-	100	65.281	Astatotilapia_calliptera
ENSCVAG00000016988	si:dkey-24l11.2	97	60.592	ENSAMXG00000035914	si:dkey-24l11.2	92	60.896	Astyanax_mexicanus
ENSCVAG00000016988	si:dkey-24l11.2	100	67.164	ENSCSEG00000013278	si:dkey-24l11.2	100	67.313	Cynoglossus_semilaevis
ENSCVAG00000016988	si:dkey-24l11.2	99	60.673	ENSELUG00000018751	si:dkey-24l11.2	97	60.673	Esox_lucius
ENSCVAG00000016988	si:dkey-24l11.2	100	81.269	ENSGAFG00000000907	si:dkey-24l11.2	100	81.873	Gambusia_affinis
ENSCVAG00000016988	si:dkey-24l11.2	62	65.196	ENSHBUG00000000459	-	100	65.526	Haplochromis_burtoni
ENSCVAG00000016988	si:dkey-24l11.2	99	66.263	ENSHCOG00000011721	si:dkey-24l11.2	99	66.263	Hippocampus_comes
ENSCVAG00000016988	si:dkey-24l11.2	100	75.758	ENSKMAG00000016828	si:dkey-24l11.2	99	75.758	Kryptolebias_marmoratus
ENSCVAG00000016988	si:dkey-24l11.2	99	58.222	ENSLOCG00000014681	si:dkey-24l11.2	98	58.284	Lepisosteus_oculatus
ENSCVAG00000016988	si:dkey-24l11.2	100	71.733	ENSMAMG00000008500	si:dkey-24l11.2	99	71.733	Mastacembelus_armatus
ENSCVAG00000016988	si:dkey-24l11.2	62	64.951	ENSMZEG00005022357	-	100	65.281	Maylandia_zebra
ENSCVAG00000016988	si:dkey-24l11.2	61	61.017	ENSMMOG00000006855	-	92	62.657	Mola_mola
ENSCVAG00000016988	si:dkey-24l11.2	97	73.323	ENSMALG00000009557	si:dkey-24l11.2	98	73.323	Monopterus_albus
ENSCVAG00000016988	si:dkey-24l11.2	61	60.100	ENSORLG00000007981	-	93	60.100	Oryzias_latipes
ENSCVAG00000016988	si:dkey-24l11.2	62	62.683	ENSORLG00020005134	-	98	62.927	Oryzias_latipes_hni
ENSCVAG00000016988	si:dkey-24l11.2	60	63.317	ENSOMEG00000023279	-	98	63.317	Oryzias_melastigma
ENSCVAG00000016988	si:dkey-24l11.2	96	56.703	ENSPKIG00000001978	si:dkey-24l11.2	96	56.662	Paramormyrops_kingsleyae
ENSCVAG00000016988	si:dkey-24l11.2	62	75.854	ENSPFOG00000003642	si:dkey-24l11.2	100	75.854	Poecilia_formosa
ENSCVAG00000016988	si:dkey-24l11.2	62	76.627	ENSPLAG00000017675	-	93	76.627	Poecilia_latipinna
ENSCVAG00000016988	si:dkey-24l11.2	100	82.148	ENSPMEG00000001177	si:dkey-24l11.2	100	82.148	Poecilia_mexicana
ENSCVAG00000016988	si:dkey-24l11.2	100	80.699	ENSPREG00000008065	si:dkey-24l11.2	94	80.699	Poecilia_reticulata
ENSCVAG00000016988	si:dkey-24l11.2	62	64.806	ENSPNYG00000011245	-	99	64.806	Pundamilia_nyererei
ENSCVAG00000016988	si:dkey-24l11.2	100	60.173	ENSPNAG00000001676	si:dkey-24l11.2	96	60.173	Pygocentrus_nattereri
ENSCVAG00000016988	si:dkey-24l11.2	99	56.745	ENSSFOG00015020381	si:dkey-24l11.2	98	56.953	Scleropages_formosus
ENSCVAG00000016988	si:dkey-24l11.2	98	71.951	ENSSMAG00000000823	si:dkey-24l11.2	98	72.104	Scophthalmus_maximus
ENSCVAG00000016988	si:dkey-24l11.2	100	71.791	ENSSDUG00000010620	si:dkey-24l11.2	100	72.605	Seriola_dumerili
ENSCVAG00000016988	si:dkey-24l11.2	100	72.090	ENSSLDG00000000205	si:dkey-24l11.2	100	72.090	Seriola_lalandi_dorsalis
ENSCVAG00000016988	si:dkey-24l11.2	100	73.445	ENSSPAG00000020867	si:dkey-24l11.2	100	73.445	Stegastes_partitus
ENSCVAG00000016988	si:dkey-24l11.2	97	67.547	ENSTRUG00000021832	si:dkey-24l11.2	96	67.593	Takifugu_rubripes
ENSCVAG00000016988	si:dkey-24l11.2	99	61.492	ENSTNIG00000019253	si:dkey-24l11.2	99	61.796	Tetraodon_nigroviridis
ENSCVAG00000016988	si:dkey-24l11.2	62	74.696	ENSXCOG00000020217	-	100	75.669	Xiphophorus_couchianus
ENSCVAG00000016988	si:dkey-24l11.2	100	80.182	ENSXMAG00000003014	si:dkey-24l11.2	100	80.787	Xiphophorus_maculatus