EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000017008 (Gene tree)
Gene ID: -
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 40169 bases
Position: chrKL652681.1:608146-648314
Accession: 107087354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014317	TUDOR	PF00567.24	2.4e-78	1	5
ENSCVAP00000014317	TUDOR	PF00567.24	2.4e-78	2	5
ENSCVAP00000014317	TUDOR	PF00567.24	2.4e-78	3	5
ENSCVAP00000014317	TUDOR	PF00567.24	2.4e-78	4	5
ENSCVAP00000014317	TUDOR	PF00567.24	2.4e-78	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031068	-	3642	XM_015378892	ENSCVAP00000014317	1213 (aa)	XP_015234378	-

Gene Model

Click here to download ENSCVAG00000017008's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017008's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017008	rnf17	81	35.833	ENSG00000132972	RNF17	93	35.833	Homo_sapiens
ENSCVAG00000017008	rnf17	95	67.733	ENSAPOG00000017034	rnf17	89	67.733	Acanthochromis_polyacanthus
ENSCVAG00000017008	rnf17	83	31.961	ENSAMEG00000017340	RNF17	68	31.961	Ailuropoda_melanoleuca
ENSCVAG00000017008	rnf17	95	65.254	ENSAOCG00000018283	rnf17	73	65.254	Amphiprion_ocellaris
ENSCVAG00000017008	rnf17	100	51.762	ENSAPEG00000022338	rnf17	92	51.762	Amphiprion_percula
ENSCVAG00000017008	rnf17	95	65.698	ENSATEG00000002067	rnf17	85	65.698	Anabas_testudineus
ENSCVAG00000017008	rnf17	83	30.508	ENSAPLG00000003969	RNF17	77	30.508	Anas_platyrhynchos
ENSCVAG00000017008	rnf17	83	36.182	ENSACAG00000001418	RNF17	70	36.182	Anolis_carolinensis
ENSCVAG00000017008	rnf17	94	58.748	ENSACLG00000018279	rnf17	76	58.840	Astatotilapia_calliptera
ENSCVAG00000017008	rnf17	98	44.106	ENSAMXG00000011002	rnf17	94	42.548	Astyanax_mexicanus
ENSCVAG00000017008	rnf17	83	32.527	ENSCJAG00000018937	RNF17	72	40.580	Callithrix_jacchus
ENSCVAG00000017008	rnf17	83	32.430	ENSCAFG00000007418	RNF17	74	32.319	Canis_familiaris
ENSCVAG00000017008	rnf17	81	36.389	ENSCHIG00000026716	RNF17	72	42.143	Capra_hircus
ENSCVAG00000017008	rnf17	81	34.167	ENSCCAG00000026725	RNF17	72	40.580	Cebus_capucinus
ENSCVAG00000017008	rnf17	81	35.574	ENSCATG00000040352	RNF17	72	40.580	Cercocebus_atys
ENSCVAG00000017008	rnf17	83	32.613	ENSCLAG00000004127	RNF17	69	32.613	Chinchilla_lanigera
ENSCVAG00000017008	rnf17	81	35.574	ENSCSAG00000018019	RNF17	64	35.574	Chlorocebus_sabaeus
ENSCVAG00000017008	rnf17	83	32.290	ENSCPBG00000020920	RNF17	72	32.290	Chrysemys_picta_bellii
ENSCVAG00000017008	rnf17	81	35.556	ENSCANG00000032927	RNF17	72	40.580	Colobus_angolensis_palliatus
ENSCVAG00000017008	rnf17	84	33.453	ENSCGRG00001022658	Rnf17	68	33.453	Cricetulus_griseus_chok1gshd
ENSCVAG00000017008	rnf17	84	33.453	ENSCGRG00000009924	Rnf17	68	33.453	Cricetulus_griseus_crigri
ENSCVAG00000017008	rnf17	91	53.951	ENSCSEG00000008626	rnf17	89	53.741	Cynoglossus_semilaevis
ENSCVAG00000017008	rnf17	92	44.900	ENSDARG00000056387	rnf17	76	44.900	Danio_rerio
ENSCVAG00000017008	rnf17	82	35.000	ENSDNOG00000006115	RNF17	63	35.000	Dasypus_novemcinctus
ENSCVAG00000017008	rnf17	82	35.833	ENSECAG00000017152	RNF17	66	35.833	Equus_caballus
ENSCVAG00000017008	rnf17	71	30.472	ENSEEUG00000000332	RNF17	65	30.043	Erinaceus_europaeus
ENSCVAG00000017008	rnf17	92	57.726	ENSELUG00000005626	rnf17	72	57.726	Esox_lucius
ENSCVAG00000017008	rnf17	83	32.079	ENSFCAG00000004914	RNF17	68	31.989	Felis_catus
ENSCVAG00000017008	rnf17	81	35.890	ENSFALG00000008766	RNF17	67	35.890	Ficedula_albicollis
ENSCVAG00000017008	rnf17	84	31.546	ENSFDAG00000017857	RNF17	67	31.546	Fukomys_damarensis
ENSCVAG00000017008	rnf17	95	61.198	ENSFHEG00000014822	rnf17	78	61.198	Fundulus_heteroclitus
ENSCVAG00000017008	rnf17	73	44.922	ENSGMOG00000015560	-	100	44.922	Gadus_morhua
ENSCVAG00000017008	rnf17	100	56.768	ENSGAFG00000004463	rnf17	92	56.768	Gambusia_affinis
ENSCVAG00000017008	rnf17	50	55.405	ENSGACG00000001340	-	100	55.405	Gasterosteus_aculeatus
ENSCVAG00000017008	rnf17	79	32.060	ENSGAGG00000016999	RNF17	70	32.060	Gopherus_agassizii
ENSCVAG00000017008	rnf17	82	35.833	ENSGGOG00000014491	RNF17	72	40.580	Gorilla_gorilla
ENSCVAG00000017008	rnf17	94	58.564	ENSHBUG00000003554	rnf17	80	58.564	Haplochromis_burtoni
ENSCVAG00000017008	rnf17	83	32.435	ENSHGLG00000007270	RNF17	67	32.435	Heterocephalus_glaber_female
ENSCVAG00000017008	rnf17	83	32.345	ENSHGLG00100017393	RNF17	68	32.345	Heterocephalus_glaber_male
ENSCVAG00000017008	rnf17	100	41.363	ENSHCOG00000017676	rnf17	91	41.363	Hippocampus_comes
ENSCVAG00000017008	rnf17	94	47.810	ENSIPUG00000001087	rnf17	73	47.814	Ictalurus_punctatus
ENSCVAG00000017008	rnf17	83	32.217	ENSJJAG00000016584	Rnf17	67	32.217	Jaculus_jaculus
ENSCVAG00000017008	rnf17	94	58.044	ENSKMAG00000013403	rnf17	76	58.257	Kryptolebias_marmoratus
ENSCVAG00000017008	rnf17	93	55.484	ENSLBEG00000014910	rnf17	85	55.576	Labrus_bergylta
ENSCVAG00000017008	rnf17	66	37.975	ENSLACG00000000323	RNF17	74	37.975	Latimeria_chalumnae
ENSCVAG00000017008	rnf17	92	35.826	ENSLOCG00000010768	rnf17	89	35.826	Lepisosteus_oculatus
ENSCVAG00000017008	rnf17	81	35.574	ENSMFAG00000032388	RNF17	72	40.580	Macaca_fascicularis
ENSCVAG00000017008	rnf17	81	35.574	ENSMMUG00000014610	RNF17	72	40.580	Macaca_mulatta
ENSCVAG00000017008	rnf17	81	35.574	ENSMNEG00000011234	RNF17	72	40.580	Macaca_nemestrina
ENSCVAG00000017008	rnf17	81	35.493	ENSMLEG00000030227	RNF17	65	35.493	Mandrillus_leucophaeus
ENSCVAG00000017008	rnf17	99	50.478	ENSMAMG00000020403	rnf17	92	50.478	Mastacembelus_armatus
ENSCVAG00000017008	rnf17	94	59.024	ENSMZEG00005019166	rnf17	76	59.116	Maylandia_zebra
ENSCVAG00000017008	rnf17	84	33.065	ENSMAUG00000004788	Rnf17	67	33.065	Mesocricetus_auratus
ENSCVAG00000017008	rnf17	83	31.961	ENSMICG00000010364	RNF17	87	30.742	Microcebus_murinus
ENSCVAG00000017008	rnf17	64	32.345	ENSMOCG00000011818	-	90	32.345	Microtus_ochrogaster
ENSCVAG00000017008	rnf17	97	61.364	ENSMMOG00000019514	rnf17	92	61.364	Mola_mola
ENSCVAG00000017008	rnf17	84	33.184	ENSMODG00000007827	RNF17	67	33.184	Monodelphis_domestica
ENSCVAG00000017008	rnf17	94	63.222	ENSMALG00000016943	rnf17	79	63.222	Monopterus_albus
ENSCVAG00000017008	rnf17	84	32.437	MGP_CAROLIEiJ_G0019337	Rnf17	68	32.437	Mus_caroli
ENSCVAG00000017008	rnf17	84	32.527	ENSMUSG00000000365	Rnf17	68	32.527	Mus_musculus
ENSCVAG00000017008	rnf17	84	32.916	MGP_PahariEiJ_G0030355	Rnf17	68	32.916	Mus_pahari
ENSCVAG00000017008	rnf17	81	36.212	MGP_SPRETEiJ_G0020228	Rnf17	64	36.212	Mus_spretus
ENSCVAG00000017008	rnf17	81	35.655	ENSMPUG00000013305	RNF17	65	35.655	Mustela_putorius_furo
ENSCVAG00000017008	rnf17	83	31.871	ENSMLUG00000003903	RNF17	69	31.871	Myotis_lucifugus
ENSCVAG00000017008	rnf17	83	33.454	ENSNGAG00000013553	Rnf17	68	33.183	Nannospalax_galili
ENSCVAG00000017008	rnf17	100	51.204	ENSNBRG00000012006	rnf17	94	51.204	Neolamprologus_brichardi
ENSCVAG00000017008	rnf17	82	35.854	ENSNLEG00000013780	RNF17	72	40.580	Nomascus_leucogenys
ENSCVAG00000017008	rnf17	95	58.932	ENSONIG00000015746	rnf17	98	53.625	Oreochromis_niloticus
ENSCVAG00000017008	rnf17	81	35.955	ENSOCUG00000007384	RNF17	65	35.955	Oryctolagus_cuniculus
ENSCVAG00000017008	rnf17	93	59.302	ENSORLG00000012818	rnf17	93	49.147	Oryzias_latipes
ENSCVAG00000017008	rnf17	96	59.302	ENSORLG00020009879	-	85	49.136	Oryzias_latipes_hni
ENSCVAG00000017008	rnf17	96	58.430	ENSORLG00015013027	-	85	48.115	Oryzias_latipes_hsok
ENSCVAG00000017008	rnf17	99	49.522	ENSOMEG00000009891	rnf17	97	50.159	Oryzias_melastigma
ENSCVAG00000017008	rnf17	81	36.111	ENSOARG00000014641	RNF17	65	36.111	Ovis_aries
ENSCVAG00000017008	rnf17	82	36.134	ENSPPAG00000028779	RNF17	76	40.580	Pan_paniscus
ENSCVAG00000017008	rnf17	81	35.376	ENSPPRG00000009230	RNF17	72	40.000	Panthera_pardus
ENSCVAG00000017008	rnf17	83	32.525	ENSPTIG00000001738	RNF17	83	30.265	Panthera_tigris_altaica
ENSCVAG00000017008	rnf17	82	36.134	ENSPTRG00000005713	RNF17	76	40.580	Pan_troglodytes
ENSCVAG00000017008	rnf17	81	35.854	ENSPANG00000007640	RNF17	72	40.580	Papio_anubis
ENSCVAG00000017008	rnf17	83	43.491	ENSPKIG00000001648	rnf17	82	43.491	Paramormyrops_kingsleyae
ENSCVAG00000017008	rnf17	81	38.950	ENSPSIG00000011245	RNF17	99	38.504	Pelodiscus_sinensis
ENSCVAG00000017008	rnf17	84	32.975	ENSPEMG00000008693	Rnf17	68	32.975	Peromyscus_maniculatus_bairdii
ENSCVAG00000017008	rnf17	66	42.929	ENSPCIG00000009190	-	90	42.929	Phascolarctos_cinereus
ENSCVAG00000017008	rnf17	91	73.547	ENSPFOG00000007124	rnf17	75	73.547	Poecilia_formosa
ENSCVAG00000017008	rnf17	93	63.611	ENSPLAG00000006198	rnf17	76	63.889	Poecilia_latipinna
ENSCVAG00000017008	rnf17	99	73.089	ENSPMEG00000022432	rnf17	92	73.089	Poecilia_mexicana
ENSCVAG00000017008	rnf17	95	57.377	ENSPREG00000001414	rnf17	87	56.957	Poecilia_reticulata
ENSCVAG00000017008	rnf17	81	35.833	ENSPPYG00000005215	RNF17	69	32.857	Pongo_abelii
ENSCVAG00000017008	rnf17	79	50.000	ENSPVAG00000013021	RNF17	63	50.000	Pteropus_vampyrus
ENSCVAG00000017008	rnf17	99	45.787	ENSPNAG00000027505	rnf17	92	45.787	Pygocentrus_nattereri
ENSCVAG00000017008	rnf17	83	32.822	ENSRNOG00000008059	Rnf17	67	32.822	Rattus_norvegicus
ENSCVAG00000017008	rnf17	84	31.050	ENSRBIG00000027010	RNF17	67	32.999	Rhinopithecus_bieti
ENSCVAG00000017008	rnf17	82	35.556	ENSRROG00000022801	RNF17	72	40.580	Rhinopithecus_roxellana
ENSCVAG00000017008	rnf17	83	32.079	ENSSBOG00000021661	RNF17	83	31.560	Saimiri_boliviensis_boliviensis
ENSCVAG00000017008	rnf17	84	32.887	ENSSHAG00000005609	RNF17	68	32.887	Sarcophilus_harrisii
ENSCVAG00000017008	rnf17	83	41.304	ENSSFOG00015023037	rnf17	81	41.304	Scleropages_formosus
ENSCVAG00000017008	rnf17	92	66.962	ENSSMAG00000007429	rnf17	77	66.962	Scophthalmus_maximus
ENSCVAG00000017008	rnf17	95	65.988	ENSSDUG00000013530	rnf17	85	65.988	Seriola_dumerili
ENSCVAG00000017008	rnf17	93	67.151	ENSSLDG00000019577	rnf17	79	67.151	Seriola_lalandi_dorsalis
ENSCVAG00000017008	rnf17	78	33.333	ENSSARG00000003016	RNF17	57	33.333	Sorex_araneus
ENSCVAG00000017008	rnf17	93	31.417	ENSSPUG00000008917	RNF17	86	31.417	Sphenodon_punctatus
ENSCVAG00000017008	rnf17	93	69.782	ENSSPAG00000001925	rnf17	83	69.782	Stegastes_partitus
ENSCVAG00000017008	rnf17	82	36.111	ENSSSCG00000009572	RNF17	73	36.111	Sus_scrofa
ENSCVAG00000017008	rnf17	63	35.328	ENSTGUG00000011267	-	99	35.328	Taeniopygia_guttata
ENSCVAG00000017008	rnf17	93	47.493	ENSTRUG00000015498	rnf17	80	47.493	Takifugu_rubripes
ENSCVAG00000017008	rnf17	83	48.030	ENSTNIG00000015681	rnf17	92	48.124	Tetraodon_nigroviridis
ENSCVAG00000017008	rnf17	83	32.310	ENSVVUG00000006226	RNF17	79	30.542	Vulpes_vulpes
ENSCVAG00000017008	rnf17	100	70.058	ENSXCOG00000018295	rnf17	93	70.058	Xiphophorus_couchianus
ENSCVAG00000017008	rnf17	100	57.574	ENSXMAG00000014747	rnf17	94	72.384	Xiphophorus_maculatus