EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017021 (Gene tree)
Gene ID: 107088590
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 14979 bases
Position: chrKL652724.1:762187-777165
Accession: 107088590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014381	MMR_HSR1	PF01926.23	3.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031094	-	1757	XM_015380870	ENSCVAP00000014381	218 (aa)	XP_015236356	UPI0000364045

Gene Model

Click here to download ENSCVAG00000017021's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017021's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017021	-	77	36.842	ENSCVAG00000017064	si:dkey-34d22.5	77	36.842
ENSCVAG00000017021	-	77	52.695	ENSCVAG00000022353	rab14	78	52.695
ENSCVAG00000017021	-	100	61.927	ENSCVAG00000020003	rab25b	100	61.927
ENSCVAG00000017021	-	77	33.929	ENSCVAG00000008670	hrasb	92	35.000
ENSCVAG00000017021	-	96	45.455	ENSCVAG00000022799	-	99	45.455
ENSCVAG00000017021	-	94	31.019	ENSCVAG00000018191	rab34a	77	31.019
ENSCVAG00000017021	-	78	54.386	ENSCVAG00000017623	rab2a	81	54.386
ENSCVAG00000017021	-	73	30.247	ENSCVAG00000004658	rasd4	77	30.247
ENSCVAG00000017021	-	89	47.959	ENSCVAG00000022585	-	96	47.959
ENSCVAG00000017021	-	73	33.125	ENSCVAG00000004027	rheb	87	33.125
ENSCVAG00000017021	-	72	36.306	ENSCVAG00000004751	rab6bb	75	36.306
ENSCVAG00000017021	-	78	40.462	ENSCVAG00000019227	zgc:101559	74	40.462
ENSCVAG00000017021	-	77	54.386	ENSCVAG00000010727	rab4a	80	54.386
ENSCVAG00000017021	-	72	40.994	ENSCVAG00000002953	RAB9A	80	40.994
ENSCVAG00000017021	-	80	45.402	ENSCVAG00000003537	si:dkey-16l2.16	98	40.670
ENSCVAG00000017021	-	94	42.512	ENSCVAG00000014915	RAB39B	96	42.512
ENSCVAG00000017021	-	85	70.270	ENSCVAG00000008126	-	87	70.270
ENSCVAG00000017021	-	74	30.061	ENSCVAG00000001281	rhebl1	88	30.061
ENSCVAG00000017021	-	100	96.789	ENSCVAG00000019718	-	100	96.789
ENSCVAG00000017021	-	73	43.396	ENSCVAG00000008276	RAB15	81	50.505
ENSCVAG00000017021	-	72	42.857	ENSCVAG00000021826	rab9b	79	42.857
ENSCVAG00000017021	-	74	34.545	ENSCVAG00000006083	si:cabz01085950.1	82	34.545
ENSCVAG00000017021	-	72	40.491	ENSCVAG00000000281	RAB7A	78	40.491
ENSCVAG00000017021	-	75	43.636	ENSCVAG00000003539	rab12	83	38.426
ENSCVAG00000017021	-	71	33.125	ENSCVAG00000001150	si:dkey-13a21.4	77	33.125
ENSCVAG00000017021	-	100	87.156	ENSCVAG00000013878	rab11a	100	87.156
ENSCVAG00000017021	-	53	30.252	ENSCVAG00000020902	arl4cb	60	30.252
ENSCVAG00000017021	-	79	34.884	ENSCVAG00000020501	rab23	81	34.940
ENSCVAG00000017021	-	100	94.495	ENSCVAG00000019751	-	100	94.495
ENSCVAG00000017021	-	72	37.580	ENSCVAG00000001618	rab41	74	37.580
ENSCVAG00000017021	-	94	40.686	ENSCVAG00000008239	rab5aa	89	40.686
ENSCVAG00000017021	-	81	33.333	ENSCVAG00000012889	rab6ba	85	33.333
ENSCVAG00000017021	-	72	37.580	ENSCVAG00000022249	rab6a	75	37.580
ENSCVAG00000017021	-	70	35.484	ENSCVAG00000006062	KRAS	87	36.527
ENSCVAG00000017021	-	96	44.550	ENSCVAG00000009222	zgc:171927	99	44.550
ENSCVAG00000017021	-	80	46.591	ENSCVAG00000015862	-	83	46.591
ENSCVAG00000017021	-	72	41.615	ENSCVAG00000016312	rab9a	75	41.615
ENSCVAG00000017021	-	96	43.541	ENSCVAG00000012806	rab35b	99	43.541
ENSCVAG00000017021	-	75	46.626	ENSCVAG00000009550	rab5c	74	46.626
ENSCVAG00000017021	-	74	43.558	ENSCVAG00000014416	-	78	43.558
ENSCVAG00000017021	-	99	81.106	ENSCVAG00000020016	rab11al	99	81.106
ENSCVAG00000017021	-	74	45.679	ENSCVAG00000015451	rab18a	79	45.679
ENSCVAG00000017021	-	75	32.544	ENSCVAG00000014038	RAB29	82	32.544
ENSCVAG00000017021	-	74	34.756	ENSCVAG00000008389	si:ch73-116o1.2	82	36.364
ENSCVAG00000017021	-	74	44.099	ENSCVAG00000018433	rab22a	83	44.099
ENSCVAG00000017021	-	82	38.587	ENSCVAG00000011665	rab33a	66	38.587
ENSCVAG00000017021	-	72	40.491	ENSCVAG00000005429	-	78	40.491
ENSCVAG00000017021	-	77	37.059	ENSCVAG00000011432	rabl2	74	37.059
ENSCVAG00000017021	-	96	39.524	ENSCVAG00000018085	rab30	97	39.524
ENSCVAG00000017021	-	93	42.574	ENSCVAG00000022649	-	96	42.574
ENSCVAG00000017021	-	75	39.535	ENSCVAG00000000862	-	76	39.535

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017021	-	100	100.000	ENSAPOG00000023455	rab11bb	100	100.000	Acanthochromis_polyacanthus
ENSCVAG00000017021	-	100	97.706	ENSACIG00000024376	-	100	97.706	Amphilophus_citrinellus
ENSCVAG00000017021	-	100	87.156	ENSACIG00000019631	rab11bb	100	87.156	Amphilophus_citrinellus
ENSCVAG00000017021	-	100	100.000	ENSAOCG00000018239	rab11bb	100	100.000	Amphiprion_ocellaris
ENSCVAG00000017021	-	100	97.706	ENSAOCG00000018849	-	100	97.706	Amphiprion_ocellaris
ENSCVAG00000017021	-	100	100.000	ENSAPEG00000016590	rab11bb	100	100.000	Amphiprion_percula
ENSCVAG00000017021	-	100	100.000	ENSATEG00000017696	rab11bb	100	100.000	Anabas_testudineus
ENSCVAG00000017021	-	100	98.165	ENSATEG00000023725	-	100	98.165	Anabas_testudineus
ENSCVAG00000017021	-	94	98.058	ENSAPLG00000011046	-	94	98.058	Anas_platyrhynchos
ENSCVAG00000017021	-	100	100.000	ENSACLG00000007076	rab11bb	100	100.000	Astatotilapia_calliptera
ENSCVAG00000017021	-	100	97.706	ENSACLG00000005446	-	100	97.706	Astatotilapia_calliptera
ENSCVAG00000017021	-	100	96.789	ENSAMXG00000037623	-	100	96.789	Astyanax_mexicanus
ENSCVAG00000017021	-	100	98.624	ENSAMXG00000042655	rab11bb	100	98.624	Astyanax_mexicanus
ENSCVAG00000017021	-	100	96.330	ENSBTAG00000002475	RAB11B	100	96.330	Bos_taurus
ENSCVAG00000017021	-	96	94.737	ENSCHIG00000022426	-	93	94.737	Capra_hircus
ENSCVAG00000017021	-	100	96.330	ENSCATG00000029188	-	100	96.330	Cercocebus_atys
ENSCVAG00000017021	-	100	97.248	ENSCPBG00000017056	-	100	97.248	Chrysemys_picta_bellii
ENSCVAG00000017021	-	100	97.248	ENSCSEG00000007239	-	100	97.248	Cynoglossus_semilaevis
ENSCVAG00000017021	-	100	100.000	ENSCSEG00000012149	rab11bb	100	100.000	Cynoglossus_semilaevis
ENSCVAG00000017021	-	100	98.165	ENSDARG00000090086	rab11bb	100	98.165	Danio_rerio
ENSCVAG00000017021	-	99	94.931	ENSETEG00000000905	-	99	94.931	Echinops_telfairi
ENSCVAG00000017021	-	99	94.884	ENSEASG00005003708	-	99	94.884	Equus_asinus_asinus
ENSCVAG00000017021	-	99	94.884	ENSECAG00000000716	RAB11B	99	94.884	Equus_caballus
ENSCVAG00000017021	-	100	96.330	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSCVAG00000017021	-	100	98.165	ENSELUG00000021148	rab11bb	100	98.165	Esox_lucius
ENSCVAG00000017021	-	100	95.413	ENSELUG00000000916	-	100	95.413	Esox_lucius
ENSCVAG00000017021	-	100	97.248	ENSFALG00000011828	-	100	97.248	Ficedula_albicollis
ENSCVAG00000017021	-	100	100.000	ENSFHEG00000018353	rab11bb	100	100.000	Fundulus_heteroclitus
ENSCVAG00000017021	-	100	98.165	ENSFHEG00000022676	-	100	98.165	Fundulus_heteroclitus
ENSCVAG00000017021	-	100	99.541	ENSGMOG00000009211	rab11bb	100	99.541	Gadus_morhua
ENSCVAG00000017021	-	99	93.519	ENSGMOG00000009668	-	99	93.519	Gadus_morhua
ENSCVAG00000017021	-	100	97.248	ENSGALG00000000613	RAB11B	100	97.248	Gallus_gallus
ENSCVAG00000017021	-	100	100.000	ENSGAFG00000007102	rab11bb	100	100.000	Gambusia_affinis
ENSCVAG00000017021	-	100	99.541	ENSGACG00000015479	rab11bb	100	99.541	Gasterosteus_aculeatus
ENSCVAG00000017021	-	100	94.495	ENSGACG00000013297	-	99	94.495	Gasterosteus_aculeatus
ENSCVAG00000017021	-	100	96.330	ENSGGOG00000014516	RAB11B	100	96.330	Gorilla_gorilla
ENSCVAG00000017021	-	100	100.000	ENSHBUG00000014777	rab11bb	100	100.000	Haplochromis_burtoni
ENSCVAG00000017021	-	100	97.706	ENSHBUG00000009947	-	100	97.706	Haplochromis_burtoni
ENSCVAG00000017021	-	100	99.541	ENSHCOG00000002423	rab11bb	100	99.541	Hippocampus_comes
ENSCVAG00000017021	-	100	95.413	ENSHCOG00000000954	-	100	95.413	Hippocampus_comes
ENSCVAG00000017021	-	100	93.578	ENSHCOG00000000985	-	100	93.578	Hippocampus_comes
ENSCVAG00000017021	-	100	97.248	ENSIPUG00000025100	rab11b	100	97.248	Ictalurus_punctatus
ENSCVAG00000017021	-	100	99.083	ENSIPUG00000019927	rab11bb	100	99.083	Ictalurus_punctatus
ENSCVAG00000017021	-	100	100.000	ENSKMAG00000009033	rab11bb	100	100.000	Kryptolebias_marmoratus
ENSCVAG00000017021	-	100	97.706	ENSKMAG00000006170	-	100	97.706	Kryptolebias_marmoratus
ENSCVAG00000017021	-	100	99.541	ENSLBEG00000015248	rab11bb	100	99.541	Labrus_bergylta
ENSCVAG00000017021	-	100	89.450	ENSLBEG00000005981	-	100	89.450	Labrus_bergylta
ENSCVAG00000017021	-	100	96.789	ENSLBEG00000004172	-	100	96.789	Labrus_bergylta
ENSCVAG00000017021	-	100	97.248	ENSLACG00000016857	-	100	97.248	Latimeria_chalumnae
ENSCVAG00000017021	-	100	96.330	ENSMFAG00000003654	RAB11B	100	96.330	Macaca_fascicularis
ENSCVAG00000017021	-	100	96.330	ENSMLEG00000030601	-	100	96.330	Mandrillus_leucophaeus
ENSCVAG00000017021	-	100	96.789	ENSMAMG00000018533	-	100	96.789	Mastacembelus_armatus
ENSCVAG00000017021	-	100	99.541	ENSMAMG00000006378	rab11bb	100	99.541	Mastacembelus_armatus
ENSCVAG00000017021	-	100	100.000	ENSMZEG00005003352	rab11bb	100	100.000	Maylandia_zebra
ENSCVAG00000017021	-	100	97.706	ENSMZEG00005010975	-	100	97.706	Maylandia_zebra
ENSCVAG00000017021	-	100	96.330	ENSMICG00000034065	-	100	96.330	Microcebus_murinus
ENSCVAG00000017021	-	100	97.706	ENSMMOG00000001250	-	100	97.706	Mola_mola
ENSCVAG00000017021	-	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSCVAG00000017021	-	94	100.000	ENSMMOG00000007917	rab11bb	100	100.000	Mola_mola
ENSCVAG00000017021	-	100	97.248	ENSMODG00000003841	-	100	97.248	Monodelphis_domestica
ENSCVAG00000017021	-	100	100.000	ENSMALG00000022187	rab11bb	100	100.000	Monopterus_albus
ENSCVAG00000017021	-	94	87.923	ENSMLUG00000006677	-	100	87.923	Myotis_lucifugus
ENSCVAG00000017021	-	100	97.706	ENSNBRG00000023885	-	100	97.706	Neolamprologus_brichardi
ENSCVAG00000017021	-	100	100.000	ENSNBRG00000000372	rab11bb	100	100.000	Neolamprologus_brichardi
ENSCVAG00000017021	-	100	97.248	ENSMEUG00000003686	-	100	97.248	Notamacropus_eugenii
ENSCVAG00000017021	-	100	100.000	ENSONIG00000010435	rab11bb	100	100.000	Oreochromis_niloticus
ENSCVAG00000017021	-	100	97.706	ENSONIG00000002544	-	100	97.706	Oreochromis_niloticus
ENSCVAG00000017021	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSCVAG00000017021	-	99	95.853	ENSORLG00000015284	-	72	95.853	Oryzias_latipes
ENSCVAG00000017021	-	100	99.541	ENSORLG00000013938	rab11bb	100	99.541	Oryzias_latipes
ENSCVAG00000017021	-	99	95.853	ENSORLG00020020844	RAB11B	99	95.853	Oryzias_latipes_hni
ENSCVAG00000017021	-	100	99.541	ENSORLG00020019393	rab11bb	100	99.541	Oryzias_latipes_hni
ENSCVAG00000017021	-	100	99.541	ENSORLG00015020173	rab11bb	100	99.541	Oryzias_latipes_hsok
ENSCVAG00000017021	-	99	95.853	ENSORLG00015016999	RAB11B	99	95.853	Oryzias_latipes_hsok
ENSCVAG00000017021	-	100	100.000	ENSOMEG00000017806	-	100	100.000	Oryzias_melastigma
ENSCVAG00000017021	-	100	96.789	ENSOMEG00000002562	-	100	96.789	Oryzias_melastigma
ENSCVAG00000017021	-	100	96.330	ENSPPAG00000028589	-	100	96.330	Pan_paniscus
ENSCVAG00000017021	-	100	96.330	ENSPTRG00000010422	RAB11B	100	96.330	Pan_troglodytes
ENSCVAG00000017021	-	100	96.330	ENSPANG00000007765	-	100	96.330	Papio_anubis
ENSCVAG00000017021	-	100	98.624	ENSPKIG00000011703	-	100	98.624	Paramormyrops_kingsleyae
ENSCVAG00000017021	-	100	99.083	ENSPKIG00000011640	rab11bb	100	99.083	Paramormyrops_kingsleyae
ENSCVAG00000017021	-	98	97.196	ENSPKIG00000001389	-	69	97.196	Paramormyrops_kingsleyae
ENSCVAG00000017021	-	98	93.151	ENSPSIG00000010242	-	85	93.151	Pelodiscus_sinensis
ENSCVAG00000017021	-	100	100.000	ENSPMGG00000009435	rab11bb	100	100.000	Periophthalmus_magnuspinnatus
ENSCVAG00000017021	-	99	93.088	ENSPMGG00000014336	-	99	93.088	Periophthalmus_magnuspinnatus
ENSCVAG00000017021	-	100	96.789	ENSPMGG00000014333	-	100	96.789	Periophthalmus_magnuspinnatus
ENSCVAG00000017021	-	97	95.755	ENSPCIG00000020371	-	99	95.755	Phascolarctos_cinereus
ENSCVAG00000017021	-	100	100.000	ENSPFOG00000024114	-	100	100.000	Poecilia_formosa
ENSCVAG00000017021	-	100	97.706	ENSPFOG00000006224	-	100	97.706	Poecilia_formosa
ENSCVAG00000017021	-	100	100.000	ENSPLAG00000001598	rab11bb	100	100.000	Poecilia_latipinna
ENSCVAG00000017021	-	100	97.706	ENSPLAG00000014207	-	100	97.706	Poecilia_latipinna
ENSCVAG00000017021	-	100	100.000	ENSPMEG00000012389	rab11bb	100	100.000	Poecilia_mexicana
ENSCVAG00000017021	-	100	97.706	ENSPMEG00000007842	-	100	97.706	Poecilia_mexicana
ENSCVAG00000017021	-	100	100.000	ENSPREG00000014269	rab11bb	100	100.000	Poecilia_reticulata
ENSCVAG00000017021	-	100	97.248	ENSPREG00000006336	-	100	97.248	Poecilia_reticulata
ENSCVAG00000017021	-	100	97.706	ENSPNYG00000019611	-	100	97.706	Pundamilia_nyererei
ENSCVAG00000017021	-	100	100.000	ENSPNYG00000004098	rab11bb	100	100.000	Pundamilia_nyererei
ENSCVAG00000017021	-	100	96.330	ENSRROG00000037812	-	100	96.330	Rhinopithecus_roxellana
ENSCVAG00000017021	-	97	96.226	ENSSHAG00000006816	-	97	96.226	Sarcophilus_harrisii
ENSCVAG00000017021	-	100	75.229	ENSSFOG00015006245	-	100	75.229	Scleropages_formosus
ENSCVAG00000017021	-	100	97.706	ENSSFOG00015009042	rab11bb	100	97.706	Scleropages_formosus
ENSCVAG00000017021	-	100	94.954	ENSSMAG00000018613	-	100	94.954	Scophthalmus_maximus
ENSCVAG00000017021	-	100	99.541	ENSSMAG00000004922	rab11bb	100	99.541	Scophthalmus_maximus
ENSCVAG00000017021	-	100	100.000	ENSSDUG00000013558	rab11bb	100	100.000	Seriola_dumerili
ENSCVAG00000017021	-	100	97.706	ENSSDUG00000002934	-	100	97.706	Seriola_dumerili
ENSCVAG00000017021	-	100	100.000	ENSSLDG00000020676	rab11bb	100	100.000	Seriola_lalandi_dorsalis
ENSCVAG00000017021	-	100	97.706	ENSSLDG00000005275	-	100	97.706	Seriola_lalandi_dorsalis
ENSCVAG00000017021	-	100	96.789	ENSSPUG00000002243	-	100	96.789	Sphenodon_punctatus
ENSCVAG00000017021	-	100	100.000	ENSSPAG00000011419	rab11bb	100	100.000	Stegastes_partitus
ENSCVAG00000017021	-	100	97.706	ENSSPAG00000014559	-	100	97.706	Stegastes_partitus
ENSCVAG00000017021	-	100	97.248	ENSTGUG00000000084	-	100	97.248	Taeniopygia_guttata
ENSCVAG00000017021	-	100	100.000	ENSTRUG00000022029	rab11bb	100	100.000	Takifugu_rubripes
ENSCVAG00000017021	-	99	94.931	ENSTRUG00000021614	-	99	94.931	Takifugu_rubripes
ENSCVAG00000017021	-	99	97.685	ENSTRUG00000021619	-	100	97.685	Takifugu_rubripes
ENSCVAG00000017021	-	99	94.470	ENSTNIG00000013184	-	99	94.470	Tetraodon_nigroviridis
ENSCVAG00000017021	-	99	97.685	ENSTNIG00000013182	-	100	97.685	Tetraodon_nigroviridis
ENSCVAG00000017021	-	100	98.624	ENSTNIG00000011081	rab11bb	100	98.624	Tetraodon_nigroviridis
ENSCVAG00000017021	-	93	96.552	ENSTNIG00000002003	-	100	96.552	Tetraodon_nigroviridis
ENSCVAG00000017021	-	94	97.073	ENSUAMG00000006639	-	99	97.073	Ursus_americanus
ENSCVAG00000017021	-	100	97.260	ENSXETG00000025484	rab11b.1	99	97.260	Xenopus_tropicalis
ENSCVAG00000017021	-	100	100.000	ENSXCOG00000008042	-	100	100.000	Xiphophorus_couchianus
ENSCVAG00000017021	-	100	97.706	ENSXCOG00000009190	-	100	97.706	Xiphophorus_couchianus
ENSCVAG00000017021	-	100	100.000	ENSXMAG00000011926	rab11bb	100	100.000	Xiphophorus_maculatus
ENSCVAG00000017021	-	100	97.248	ENSXMAG00000024840	-	100	97.248	Xiphophorus_maculatus