EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017030 (Gene tree)
Gene ID: 107090251
Gene Symbol: -
Alias: -
Full Name: zinc finger RANBP2-type containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 20256 bases
Position: chrKL652786.1:55802-76057
Accession: 107090251
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000029329	zf-RanBP	PF00641.18	1.2e-12	1	2
ENSCVAP00000029329	zf-RanBP	PF00641.18	1.2e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022204	-	3497	XM_015383531	ENSCVAP00000029329	707 (aa)	XP_015239017	UPI00074294F1

Gene Model

Click here to download ENSCVAG00000017030's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017030's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017030	-	99	80.111	ENSCVAG00000019593	zranb1b	99	80.305

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017030	-	99	76.527	ENSCHOG00000007307	-	98	76.527	Choloepus_hoffmanni
ENSCVAG00000017030	-	99	93.714	ENSGAFG00000010248	-	93	93.714	Gambusia_affinis
ENSCVAG00000017030	-	99	95.000	ENSPFOG00000010897	-	98	95.000	Poecilia_formosa
ENSCVAG00000017030	-	99	94.857	ENSPLAG00000000129	-	99	94.857	Poecilia_latipinna
ENSCVAG00000017030	-	99	95.000	ENSPMEG00000004735	-	99	95.000	Poecilia_mexicana
ENSCVAG00000017030	-	99	94.571	ENSPREG00000006907	-	94	94.571	Poecilia_reticulata
ENSCVAG00000017030	-	99	95.000	ENSXMAG00000029327	-	99	95.000	Xiphophorus_maculatus