EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000017127 (Gene tree)
Gene ID: 107096982
Gene Symbol: r3hdm4
Alias: zgc:158644
Full Name: R3H domain containing 4
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8941 bases
Position: chrKL653162.1:300179-309119
Accession: 107096982
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014479	R3H	PF01424.22	3.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031128	-	3847	XM_015393921	ENSCVAP00000014479	255 (aa)	XP_015249407	UPI000742ACC8

Gene Model

Click here to download ENSCVAG00000017127's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017127's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017127	r3hdm4	93	56.000	ENSG00000198858	R3HDM4	93	56.000	Homo_sapiens
ENSCVAG00000017127	r3hdm4	92	57.143	ENSAMEG00000003001	R3HDM4	97	57.143	Ailuropoda_melanoleuca
ENSCVAG00000017127	r3hdm4	100	87.891	ENSACIG00000004672	r3hdm4	100	87.891	Amphilophus_citrinellus
ENSCVAG00000017127	r3hdm4	98	83.333	ENSATEG00000015913	r3hdm4	99	83.333	Anabas_testudineus
ENSCVAG00000017127	r3hdm4	92	57.322	ENSANAG00000029748	R3HDM4	98	56.067	Aotus_nancymaae
ENSCVAG00000017127	r3hdm4	93	56.400	ENSBTAG00000046406	R3HDM4	91	56.400	Bos_taurus
ENSCVAG00000017127	r3hdm4	99	54.340	ENSCJAG00000020114	R3HDM4	98	53.208	Callithrix_jacchus
ENSCVAG00000017127	r3hdm4	92	56.904	ENSCAFG00000019665	R3HDM4	87	56.904	Canis_familiaris
ENSCVAG00000017127	r3hdm4	92	57.322	ENSCAFG00020016880	R3HDM4	87	57.322	Canis_lupus_dingo
ENSCVAG00000017127	r3hdm4	93	56.800	ENSCHIG00000020110	R3HDM4	91	57.741	Capra_hircus
ENSCVAG00000017127	r3hdm4	92	56.904	ENSCCAG00000019955	R3HDM4	86	56.067	Cebus_capucinus
ENSCVAG00000017127	r3hdm4	93	55.777	ENSCATG00000037269	R3HDM4	93	55.777	Cercocebus_atys
ENSCVAG00000017127	r3hdm4	92	56.303	ENSCLAG00000007094	R3HDM4	97	56.303	Chinchilla_lanigera
ENSCVAG00000017127	r3hdm4	93	55.823	ENSCSAG00000012574	R3HDM4	93	55.823	Chlorocebus_sabaeus
ENSCVAG00000017127	r3hdm4	100	60.902	ENSCPBG00000009805	R3HDM4	100	60.902	Chrysemys_picta_bellii
ENSCVAG00000017127	r3hdm4	92	56.911	ENSCANG00000040439	R3HDM4	83	57.143	Colobus_angolensis_palliatus
ENSCVAG00000017127	r3hdm4	91	56.118	ENSCGRG00001021650	R3hdm4	89	56.540	Cricetulus_griseus_chok1gshd
ENSCVAG00000017127	r3hdm4	91	56.118	ENSCGRG00000013169	R3hdm4	89	56.540	Cricetulus_griseus_crigri
ENSCVAG00000017127	r3hdm4	100	76.078	ENSCSEG00000018211	r3hdm4	99	73.333	Cynoglossus_semilaevis
ENSCVAG00000017127	r3hdm4	91	55.649	ENSDORG00000006605	R3hdm4	96	55.649	Dipodomys_ordii
ENSCVAG00000017127	r3hdm4	92	56.904	ENSEASG00005021556	R3HDM4	86	56.904	Equus_asinus_asinus
ENSCVAG00000017127	r3hdm4	92	56.904	ENSECAG00000000003	R3HDM4	87	56.904	Equus_caballus
ENSCVAG00000017127	r3hdm4	93	56.800	ENSFCAG00000042437	R3HDM4	92	56.800	Felis_catus
ENSCVAG00000017127	r3hdm4	90	63.948	ENSFALG00000013938	R3HDM4	96	63.948	Ficedula_albicollis
ENSCVAG00000017127	r3hdm4	92	55.882	ENSFDAG00000017040	R3HDM4	97	55.882	Fukomys_damarensis
ENSCVAG00000017127	r3hdm4	100	92.549	ENSFHEG00000017636	r3hdm4	100	92.549	Fundulus_heteroclitus
ENSCVAG00000017127	r3hdm4	95	69.835	ENSGMOG00000001231	r3hdm4	100	69.835	Gadus_morhua
ENSCVAG00000017127	r3hdm4	91	61.345	ENSGALG00000001998	R3HDM4	90	61.345	Gallus_gallus
ENSCVAG00000017127	r3hdm4	100	91.373	ENSGAFG00000004173	r3hdm4	100	91.373	Gambusia_affinis
ENSCVAG00000017127	r3hdm4	100	60.526	ENSGAGG00000019698	R3HDM4	100	60.526	Gopherus_agassizii
ENSCVAG00000017127	r3hdm4	92	57.322	ENSGGOG00000008040	R3HDM4	97	57.322	Gorilla_gorilla
ENSCVAG00000017127	r3hdm4	100	88.281	ENSHBUG00000014810	r3hdm4	100	88.281	Haplochromis_burtoni
ENSCVAG00000017127	r3hdm4	92	55.042	ENSHGLG00000016194	R3HDM4	88	54.202	Heterocephalus_glaber_female
ENSCVAG00000017127	r3hdm4	99	81.569	ENSHCOG00000008422	r3hdm4	99	81.569	Hippocampus_comes
ENSCVAG00000017127	r3hdm4	100	70.155	ENSIPUG00000006716	r3hdm4	100	70.155	Ictalurus_punctatus
ENSCVAG00000017127	r3hdm4	92	55.042	ENSSTOG00000023015	R3HDM4	97	55.649	Ictidomys_tridecemlineatus
ENSCVAG00000017127	r3hdm4	91	55.508	ENSJJAG00000012475	R3hdm4	89	55.274	Jaculus_jaculus
ENSCVAG00000017127	r3hdm4	100	89.453	ENSKMAG00000005853	r3hdm4	100	89.453	Kryptolebias_marmoratus
ENSCVAG00000017127	r3hdm4	100	85.156	ENSLBEG00000000730	r3hdm4	100	85.156	Labrus_bergylta
ENSCVAG00000017127	r3hdm4	100	59.924	ENSLACG00000016445	R3HDM4	100	59.924	Latimeria_chalumnae
ENSCVAG00000017127	r3hdm4	100	68.582	ENSLOCG00000002423	r3hdm4	100	68.966	Lepisosteus_oculatus
ENSCVAG00000017127	r3hdm4	91	56.540	ENSLAFG00000017796	R3HDM4	91	56.540	Loxodonta_africana
ENSCVAG00000017127	r3hdm4	93	56.225	ENSMFAG00000044131	R3HDM4	93	56.225	Macaca_fascicularis
ENSCVAG00000017127	r3hdm4	86	58.482	ENSMMUG00000009682	R3HDM4	90	58.482	Macaca_mulatta
ENSCVAG00000017127	r3hdm4	92	57.143	ENSMNEG00000044115	R3HDM4	96	57.143	Macaca_nemestrina
ENSCVAG00000017127	r3hdm4	93	56.379	ENSMLEG00000035693	R3HDM4	89	56.379	Mandrillus_leucophaeus
ENSCVAG00000017127	r3hdm4	87	83.408	ENSMAMG00000005652	r3hdm4	91	83.408	Mastacembelus_armatus
ENSCVAG00000017127	r3hdm4	99	52.453	ENSMAUG00000010611	R3hdm4	99	52.453	Mesocricetus_auratus
ENSCVAG00000017127	r3hdm4	100	52.574	ENSMICG00000010124	R3HDM4	100	52.574	Microcebus_murinus
ENSCVAG00000017127	r3hdm4	91	54.894	ENSMOCG00000002646	R3hdm4	89	54.661	Microtus_ochrogaster
ENSCVAG00000017127	r3hdm4	100	83.922	ENSMMOG00000008253	r3hdm4	100	83.922	Mola_mola
ENSCVAG00000017127	r3hdm4	89	59.565	ENSMODG00000005698	R3HDM4	99	59.565	Monodelphis_domestica
ENSCVAG00000017127	r3hdm4	100	82.422	ENSMALG00000018856	r3hdm4	100	82.422	Monopterus_albus
ENSCVAG00000017127	r3hdm4	91	55.319	MGP_CAROLIEiJ_G0015551	R3hdm4	89	55.319	Mus_caroli
ENSCVAG00000017127	r3hdm4	99	51.724	ENSMUSG00000035781	R3hdm4	99	51.527	Mus_musculus
ENSCVAG00000017127	r3hdm4	99	52.091	MGP_PahariEiJ_G0030964	R3hdm4	99	52.091	Mus_pahari
ENSCVAG00000017127	r3hdm4	99	52.471	MGP_SPRETEiJ_G0016369	-	84	52.273	Mus_spretus
ENSCVAG00000017127	r3hdm4	93	57.851	ENSMPUG00000009394	R3HDM4	90	57.851	Mustela_putorius_furo
ENSCVAG00000017127	r3hdm4	100	87.500	ENSNBRG00000004438	r3hdm4	100	87.500	Neolamprologus_brichardi
ENSCVAG00000017127	r3hdm4	87	53.247	ENSNLEG00000001022	R3HDM4	99	53.247	Nomascus_leucogenys
ENSCVAG00000017127	r3hdm4	92	57.563	ENSMEUG00000011020	R3HDM4	99	57.563	Notamacropus_eugenii
ENSCVAG00000017127	r3hdm4	92	56.303	ENSODEG00000011745	R3HDM4	88	56.303	Octodon_degus
ENSCVAG00000017127	r3hdm4	100	87.891	ENSONIG00000012675	r3hdm4	92	87.891	Oreochromis_niloticus
ENSCVAG00000017127	r3hdm4	100	85.156	ENSOMEG00000003005	r3hdm4	100	85.156	Oryzias_melastigma
ENSCVAG00000017127	r3hdm4	91	56.356	ENSOGAG00000025656	R3HDM4	89	56.356	Otolemur_garnettii
ENSCVAG00000017127	r3hdm4	92	56.904	ENSOARG00000009945	R3HDM4	97	56.904	Ovis_aries
ENSCVAG00000017127	r3hdm4	92	56.904	ENSPPAG00000042371	R3HDM4	97	56.904	Pan_paniscus
ENSCVAG00000017127	r3hdm4	93	56.225	ENSPANG00000015203	R3HDM4	93	56.225	Papio_anubis
ENSCVAG00000017127	r3hdm4	100	66.031	ENSPKIG00000007421	r3hdm4	100	67.557	Paramormyrops_kingsleyae
ENSCVAG00000017127	r3hdm4	100	75.875	ENSPMGG00000020467	r3hdm4	100	75.875	Periophthalmus_magnuspinnatus
ENSCVAG00000017127	r3hdm4	91	56.596	ENSPEMG00000008365	Tmem259	97	56.596	Peromyscus_maniculatus_bairdii
ENSCVAG00000017127	r3hdm4	100	90.588	ENSPFOG00000003199	r3hdm4	100	90.588	Poecilia_formosa
ENSCVAG00000017127	r3hdm4	100	90.196	ENSPMEG00000014183	r3hdm4	100	90.196	Poecilia_mexicana
ENSCVAG00000017127	r3hdm4	100	91.373	ENSPREG00000010709	r3hdm4	100	91.373	Poecilia_reticulata
ENSCVAG00000017127	r3hdm4	92	56.962	ENSPPYG00000009297	R3HDM4	88	56.962	Pongo_abelii
ENSCVAG00000017127	r3hdm4	58	61.184	ENSPCAG00000010997	R3HDM4	55	61.184	Procavia_capensis
ENSCVAG00000017127	r3hdm4	100	53.676	ENSPCOG00000016785	R3HDM4	100	53.676	Propithecus_coquereli
ENSCVAG00000017127	r3hdm4	100	88.281	ENSPNYG00000017489	r3hdm4	100	88.281	Pundamilia_nyererei
ENSCVAG00000017127	r3hdm4	91	54.852	ENSRNOG00000011489	R3hdm4	89	54.622	Rattus_norvegicus
ENSCVAG00000017127	r3hdm4	92	57.143	ENSRROG00000028842	R3HDM4	88	57.143	Rhinopithecus_roxellana
ENSCVAG00000017127	r3hdm4	92	56.225	ENSSBOG00000019298	R3HDM4	73	55.422	Saimiri_boliviensis_boliviensis
ENSCVAG00000017127	r3hdm4	56	61.644	ENSSHAG00000003036	-	79	64.348	Sarcophilus_harrisii
ENSCVAG00000017127	r3hdm4	97	71.774	ENSSFOG00015020574	r3hdm4	91	71.888	Scleropages_formosus
ENSCVAG00000017127	r3hdm4	100	84.766	ENSSMAG00000021090	r3hdm4	74	84.766	Scophthalmus_maximus
ENSCVAG00000017127	r3hdm4	100	87.500	ENSSDUG00000008488	r3hdm4	100	87.500	Seriola_dumerili
ENSCVAG00000017127	r3hdm4	100	87.109	ENSSLDG00000025328	r3hdm4	100	87.109	Seriola_lalandi_dorsalis
ENSCVAG00000017127	r3hdm4	93	61.250	ENSSPUG00000005434	R3HDM4	93	61.250	Sphenodon_punctatus
ENSCVAG00000017127	r3hdm4	99	79.688	ENSSPAG00000002562	r3hdm4	99	79.688	Stegastes_partitus
ENSCVAG00000017127	r3hdm4	93	57.200	ENSSSCG00000013419	R3HDM4	91	57.200	Sus_scrofa
ENSCVAG00000017127	r3hdm4	77	56.650	ENSTGUG00000000663	R3HDM4	97	57.143	Taeniopygia_guttata
ENSCVAG00000017127	r3hdm4	92	57.627	ENSTTRG00000001470	R3HDM4	97	57.627	Tursiops_truncatus
ENSCVAG00000017127	r3hdm4	93	52.227	ENSUAMG00000005751	R3HDM4	100	58.036	Ursus_americanus
ENSCVAG00000017127	r3hdm4	93	56.000	ENSVVUG00000022685	R3HDM4	91	56.000	Vulpes_vulpes
ENSCVAG00000017127	r3hdm4	97	46.774	ENSXETG00000033624	R3HDM4	96	46.774	Xenopus_tropicalis
ENSCVAG00000017127	r3hdm4	100	89.062	ENSXCOG00000005127	r3hdm4	100	89.062	Xiphophorus_couchianus
ENSCVAG00000017127	r3hdm4	100	89.412	ENSXMAG00000022875	r3hdm4	100	89.412	Xiphophorus_maculatus