EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000017180 (Gene tree)
Gene ID: 107102828
Gene Symbol: gatb
Alias: pet112|pet112l|si:ch211-150a22.1|zgc:103736
Full Name: glutamyl-tRNA amidotransferase subunit B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 26222 bases
Position: chrKL653827.1:116863-143084
Accession: 107102828
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000029396	GatB_Yqey	PF02637.18	9.7e-41	1	1
ENSCVAP00000029387	GatB_Yqey	PF02637.18	9.8e-41	1	1
ENSCVAP00000029373	GatB_Yqey	PF02637.18	1.1e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022353	-	1521	-	ENSCVAP00000029387	506 (aa)	-	-
ENSCVAT00000031110	-	1756	-	ENSCVAP00000029396	503 (aa)	-	-
ENSCVAT00000022322	-	1936	XM_015402264	ENSCVAP00000029373	570 (aa)	XP_015257750	-

Gene Model

Click here to download ENSCVAG00000017180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017180's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017180	gatb	99	67.404	ENSG00000059691	GATB	89	67.404	Homo_sapiens
ENSCVAG00000017180	gatb	99	89.960	ENSAPOG00000022676	gatb	100	81.002	Acanthochromis_polyacanthus
ENSCVAG00000017180	gatb	99	66.400	ENSAMEG00000018434	GATB	89	66.400	Ailuropoda_melanoleuca
ENSCVAG00000017180	gatb	87	87.643	ENSACIG00000015827	gatb	100	87.643	Amphilophus_citrinellus
ENSCVAG00000017180	gatb	99	89.960	ENSAOCG00000009635	gatb	95	89.960	Amphiprion_ocellaris
ENSCVAG00000017180	gatb	99	84.538	ENSAPEG00000023666	gatb	94	84.538	Amphiprion_percula
ENSCVAG00000017180	gatb	99	87.349	ENSATEG00000011821	gatb	100	79.138	Anabas_testudineus
ENSCVAG00000017180	gatb	98	69.636	ENSAPLG00000003933	GATB	99	69.636	Anas_platyrhynchos
ENSCVAG00000017180	gatb	97	68.571	ENSACAG00000002772	GATB	89	68.571	Anolis_carolinensis
ENSCVAG00000017180	gatb	99	66.600	ENSANAG00000020953	GATB	89	66.600	Aotus_nancymaae
ENSCVAG00000017180	gatb	89	87.556	ENSACLG00000026091	gatb	92	87.033	Astatotilapia_calliptera
ENSCVAG00000017180	gatb	99	70.341	ENSAMXG00000021662	gatb	89	70.341	Astyanax_mexicanus
ENSCVAG00000017180	gatb	99	66.129	ENSBTAG00000013914	GATB	89	66.129	Bos_taurus
ENSCVAG00000017180	gatb	99	66.801	ENSCJAG00000002147	GATB	89	66.801	Callithrix_jacchus
ENSCVAG00000017180	gatb	98	67.814	ENSCAFG00000008088	GATB	89	67.814	Canis_familiaris
ENSCVAG00000017180	gatb	98	67.814	ENSCAFG00020026686	GATB	89	67.814	Canis_lupus_dingo
ENSCVAG00000017180	gatb	99	65.795	ENSCHIG00000020111	GATB	89	65.795	Capra_hircus
ENSCVAG00000017180	gatb	99	68.209	ENSTSYG00000009976	GATB	89	68.209	Carlito_syrichta
ENSCVAG00000017180	gatb	96	59.459	ENSCAPG00000010977	GATB	90	59.459	Cavia_aperea
ENSCVAG00000017180	gatb	98	66.126	ENSCPOG00000005023	GATB	88	66.126	Cavia_porcellus
ENSCVAG00000017180	gatb	81	72.549	ENSCCAG00000021445	GATB	82	72.549	Cebus_capucinus
ENSCVAG00000017180	gatb	99	66.801	ENSCATG00000034281	GATB	89	66.801	Cercocebus_atys
ENSCVAG00000017180	gatb	99	66.398	ENSCLAG00000005772	GATB	87	71.290	Chinchilla_lanigera
ENSCVAG00000017180	gatb	99	67.002	ENSCSAG00000003318	GATB	89	67.002	Chlorocebus_sabaeus
ENSCVAG00000017180	gatb	99	67.203	ENSCHOG00000008476	GATB	89	67.203	Choloepus_hoffmanni
ENSCVAG00000017180	gatb	98	70.040	ENSCPBG00000025824	GATB	89	70.040	Chrysemys_picta_bellii
ENSCVAG00000017180	gatb	99	67.606	ENSCANG00000029227	GATB	89	67.606	Colobus_angolensis_palliatus
ENSCVAG00000017180	gatb	99	67.807	ENSCGRG00001024051	GATB	87	72.019	Cricetulus_griseus_chok1gshd
ENSCVAG00000017180	gatb	99	67.807	ENSCGRG00000012974	GATB	87	72.019	Cricetulus_griseus_crigri
ENSCVAG00000017180	gatb	99	82.329	ENSCSEG00000004009	gatb	100	80.549	Cynoglossus_semilaevis
ENSCVAG00000017180	gatb	98	74.239	ENSDARG00000037309	gatb	89	74.239	Danio_rerio
ENSCVAG00000017180	gatb	99	67.735	ENSDNOG00000012683	GATB	89	67.735	Dasypus_novemcinctus
ENSCVAG00000017180	gatb	98	65.992	ENSDORG00000010241	Gatb	89	65.992	Dipodomys_ordii
ENSCVAG00000017180	gatb	97	46.748	FBgn0039153	GatB	94	46.748	Drosophila_melanogaster
ENSCVAG00000017180	gatb	79	74.545	ENSETEG00000002356	GATB	81	74.545	Echinops_telfairi
ENSCVAG00000017180	gatb	50	47.809	ENSEBUG00000005611	-	95	47.809	Eptatretus_burgeri
ENSCVAG00000017180	gatb	98	68.283	ENSEASG00005015868	GATB	89	68.283	Equus_asinus_asinus
ENSCVAG00000017180	gatb	98	66.869	ENSECAG00000003539	GATB	88	66.869	Equus_caballus
ENSCVAG00000017180	gatb	83	64.955	ENSEEUG00000002311	GATB	75	64.955	Erinaceus_europaeus
ENSCVAG00000017180	gatb	99	78.313	ENSELUG00000013584	gatb	97	78.044	Esox_lucius
ENSCVAG00000017180	gatb	99	67.404	ENSFCAG00000003207	GATB	89	67.404	Felis_catus
ENSCVAG00000017180	gatb	89	65.848	ENSFALG00000002209	GATB	99	65.848	Ficedula_albicollis
ENSCVAG00000017180	gatb	98	66.194	ENSFDAG00000006426	GATB	87	70.560	Fukomys_damarensis
ENSCVAG00000017180	gatb	99	92.972	ENSFHEG00000008643	GATB	100	84.602	Fundulus_heteroclitus
ENSCVAG00000017180	gatb	98	78.252	ENSGMOG00000001575	gatb	100	78.252	Gadus_morhua
ENSCVAG00000017180	gatb	98	69.433	ENSGALG00000010097	GATB	91	69.433	Gallus_gallus
ENSCVAG00000017180	gatb	99	88.956	ENSGAFG00000014422	gatb	100	80.796	Gambusia_affinis
ENSCVAG00000017180	gatb	98	83.096	ENSGACG00000017143	gatb	99	83.096	Gasterosteus_aculeatus
ENSCVAG00000017180	gatb	98	70.445	ENSGAGG00000007826	GATB	89	70.445	Gopherus_agassizii
ENSCVAG00000017180	gatb	99	67.203	ENSGGOG00000011099	GATB	89	67.203	Gorilla_gorilla
ENSCVAG00000017180	gatb	97	88.548	ENSHBUG00000009656	gatb	98	86.747	Haplochromis_burtoni
ENSCVAG00000017180	gatb	99	65.795	ENSHGLG00000001316	GATB	87	70.944	Heterocephalus_glaber_female
ENSCVAG00000017180	gatb	99	65.996	ENSHGLG00100004289	GATB	87	71.290	Heterocephalus_glaber_male
ENSCVAG00000017180	gatb	99	78.758	ENSHCOG00000006270	gatb	90	78.758	Hippocampus_comes
ENSCVAG00000017180	gatb	99	72.379	ENSIPUG00000013560	gatb	100	65.464	Ictalurus_punctatus
ENSCVAG00000017180	gatb	98	68.485	ENSSTOG00000005689	GATB	89	68.485	Ictidomys_tridecemlineatus
ENSCVAG00000017180	gatb	98	66.667	ENSJJAG00000016979	Gatb	86	71.182	Jaculus_jaculus
ENSCVAG00000017180	gatb	99	88.330	ENSKMAG00000004727	gatb	100	79.447	Kryptolebias_marmoratus
ENSCVAG00000017180	gatb	99	85.141	ENSLBEG00000019511	gatb	100	76.420	Labrus_bergylta
ENSCVAG00000017180	gatb	98	65.587	ENSLACG00000004352	GATB	96	65.060	Latimeria_chalumnae
ENSCVAG00000017180	gatb	99	65.538	ENSLOCG00000008564	gatb	90	65.538	Lepisosteus_oculatus
ENSCVAG00000017180	gatb	99	68.410	ENSLAFG00000022607	GATB	89	68.410	Loxodonta_africana
ENSCVAG00000017180	gatb	99	67.203	ENSMMUG00000011048	GATB	89	67.203	Macaca_mulatta
ENSCVAG00000017180	gatb	99	67.002	ENSMNEG00000040147	GATB	89	67.002	Macaca_nemestrina
ENSCVAG00000017180	gatb	99	67.404	ENSMLEG00000042135	GATB	89	67.404	Mandrillus_leucophaeus
ENSCVAG00000017180	gatb	99	86.948	ENSMAMG00000013256	gatb	91	86.948	Mastacembelus_armatus
ENSCVAG00000017180	gatb	99	88.153	ENSMZEG00005008495	gatb	100	79.620	Maylandia_zebra
ENSCVAG00000017180	gatb	98	69.371	ENSMGAG00000004276	GATB	97	69.371	Meleagris_gallopavo
ENSCVAG00000017180	gatb	99	67.807	ENSMAUG00000019099	Gatb	87	71.533	Mesocricetus_auratus
ENSCVAG00000017180	gatb	99	66.801	ENSMICG00000004311	GATB	88	66.801	Microcebus_murinus
ENSCVAG00000017180	gatb	99	66.801	ENSMOCG00000017566	Gatb	87	70.560	Microtus_ochrogaster
ENSCVAG00000017180	gatb	99	70.259	ENSMMOG00000005376	gatb	87	70.259	Mola_mola
ENSCVAG00000017180	gatb	98	68.283	ENSMODG00000001031	GATB	90	68.283	Monodelphis_domestica
ENSCVAG00000017180	gatb	97	87.910	ENSMALG00000003418	gatb	90	87.910	Monopterus_albus
ENSCVAG00000017180	gatb	99	65.996	MGP_CAROLIEiJ_G0025120	Gatb	87	69.903	Mus_caroli
ENSCVAG00000017180	gatb	99	65.996	ENSMUSG00000028085	Gatb	87	69.830	Mus_musculus
ENSCVAG00000017180	gatb	99	66.398	MGP_PahariEiJ_G0026563	Gatb	87	70.073	Mus_pahari
ENSCVAG00000017180	gatb	99	65.996	MGP_SPRETEiJ_G0026062	Gatb	89	65.996	Mus_spretus
ENSCVAG00000017180	gatb	99	66.801	ENSMPUG00000007394	GATB	89	66.801	Mustela_putorius_furo
ENSCVAG00000017180	gatb	99	68.209	ENSMLUG00000008194	GATB	89	68.209	Myotis_lucifugus
ENSCVAG00000017180	gatb	99	67.606	ENSNGAG00000002152	Gatb	87	71.845	Nannospalax_galili
ENSCVAG00000017180	gatb	87	87.699	ENSNBRG00000005947	gatb	100	87.699	Neolamprologus_brichardi
ENSCVAG00000017180	gatb	99	67.203	ENSNLEG00000005836	GATB	89	67.203	Nomascus_leucogenys
ENSCVAG00000017180	gatb	98	67.677	ENSMEUG00000001479	GATB	99	67.677	Notamacropus_eugenii
ENSCVAG00000017180	gatb	99	68.008	ENSOPRG00000011496	GATB	89	68.008	Ochotona_princeps
ENSCVAG00000017180	gatb	99	64.990	ENSODEG00000005429	GATB	87	69.830	Octodon_degus
ENSCVAG00000017180	gatb	99	88.153	ENSONIG00000010059	gatb	100	79.793	Oreochromis_niloticus
ENSCVAG00000017180	gatb	86	65.287	ENSOANG00000005282	GATB	99	65.287	Ornithorhynchus_anatinus
ENSCVAG00000017180	gatb	99	67.404	ENSOCUG00000016875	GATB	89	67.404	Oryctolagus_cuniculus
ENSCVAG00000017180	gatb	98	82.556	ENSORLG00000007740	gatb	99	82.556	Oryzias_latipes
ENSCVAG00000017180	gatb	99	84.476	ENSORLG00020016385	gatb	91	84.476	Oryzias_latipes_hni
ENSCVAG00000017180	gatb	99	84.507	ENSOMEG00000003089	gatb	91	84.507	Oryzias_melastigma
ENSCVAG00000017180	gatb	99	65.927	ENSOGAG00000014181	GATB	89	65.927	Otolemur_garnettii
ENSCVAG00000017180	gatb	99	65.400	ENSOARG00000004355	GATB	89	65.400	Ovis_aries
ENSCVAG00000017180	gatb	99	67.404	ENSPPAG00000041690	GATB	89	67.404	Pan_paniscus
ENSCVAG00000017180	gatb	99	67.404	ENSPPRG00000004993	GATB	89	67.404	Panthera_pardus
ENSCVAG00000017180	gatb	99	67.404	ENSPTIG00000021433	GATB	89	67.404	Panthera_tigris_altaica
ENSCVAG00000017180	gatb	99	64.789	ENSPTRG00000016513	GATB	91	63.692	Pan_troglodytes
ENSCVAG00000017180	gatb	99	64.789	ENSPANG00000024036	GATB	89	64.789	Papio_anubis
ENSCVAG00000017180	gatb	99	74.044	ENSPKIG00000017076	gatb	97	73.800	Paramormyrops_kingsleyae
ENSCVAG00000017180	gatb	98	68.219	ENSPSIG00000017832	GATB	90	68.219	Pelodiscus_sinensis
ENSCVAG00000017180	gatb	99	71.285	ENSPMGG00000016497	gatb	89	71.285	Periophthalmus_magnuspinnatus
ENSCVAG00000017180	gatb	99	67.606	ENSPEMG00000011096	Gatb	87	71.533	Peromyscus_maniculatus_bairdii
ENSCVAG00000017180	gatb	98	68.485	ENSPCIG00000015213	GATB	90	68.485	Phascolarctos_cinereus
ENSCVAG00000017180	gatb	99	88.400	ENSPFOG00000009933	gatb	100	80.034	Poecilia_formosa
ENSCVAG00000017180	gatb	99	88.934	ENSPLAG00000015569	gatb	100	80.623	Poecilia_latipinna
ENSCVAG00000017180	gatb	99	88.732	ENSPMEG00000006100	gatb	100	80.277	Poecilia_mexicana
ENSCVAG00000017180	gatb	99	88.330	ENSPREG00000000128	gatb	100	79.758	Poecilia_reticulata
ENSCVAG00000017180	gatb	99	67.807	ENSPPYG00000015121	GATB	89	67.807	Pongo_abelii
ENSCVAG00000017180	gatb	99	54.527	ENSPCAG00000005950	GATB	89	54.527	Procavia_capensis
ENSCVAG00000017180	gatb	99	66.398	ENSPCOG00000021777	GATB	90	66.398	Propithecus_coquereli
ENSCVAG00000017180	gatb	99	67.404	ENSPVAG00000006891	GATB	89	67.404	Pteropus_vampyrus
ENSCVAG00000017180	gatb	99	88.153	ENSPNYG00000013884	gatb	100	79.620	Pundamilia_nyererei
ENSCVAG00000017180	gatb	99	74.597	ENSPNAG00000020150	gatb	90	74.597	Pygocentrus_nattereri
ENSCVAG00000017180	gatb	99	65.191	ENSRNOG00000037655	Gatb	89	65.191	Rattus_norvegicus
ENSCVAG00000017180	gatb	99	67.606	ENSRBIG00000006453	GATB	89	67.606	Rhinopithecus_bieti
ENSCVAG00000017180	gatb	99	67.606	ENSRROG00000041575	GATB	89	67.606	Rhinopithecus_roxellana
ENSCVAG00000017180	gatb	94	30.948	YBL080C	-	91	30.948	Saccharomyces_cerevisiae
ENSCVAG00000017180	gatb	99	66.600	ENSSBOG00000022495	GATB	89	66.600	Saimiri_boliviensis_boliviensis
ENSCVAG00000017180	gatb	98	67.677	ENSSHAG00000011763	GATB	90	67.677	Sarcophilus_harrisii
ENSCVAG00000017180	gatb	99	73.674	ENSSFOG00015015565	gatb	92	73.674	Scleropages_formosus
ENSCVAG00000017180	gatb	99	88.153	ENSSMAG00000003609	gatb	69	88.153	Scophthalmus_maximus
ENSCVAG00000017180	gatb	99	87.324	ENSSDUG00000019847	gatb	91	87.324	Seriola_dumerili
ENSCVAG00000017180	gatb	99	86.922	ENSSLDG00000010253	gatb	96	86.922	Seriola_lalandi_dorsalis
ENSCVAG00000017180	gatb	71	63.869	ENSSARG00000003212	GATB	64	63.869	Sorex_araneus
ENSCVAG00000017180	gatb	98	67.886	ENSSPUG00000014453	GATB	95	67.886	Sphenodon_punctatus
ENSCVAG00000017180	gatb	99	89.357	ENSSPAG00000014465	gatb	99	89.357	Stegastes_partitus
ENSCVAG00000017180	gatb	99	67.002	ENSSSCG00000009015	GATB	99	64.531	Sus_scrofa
ENSCVAG00000017180	gatb	98	69.433	ENSTGUG00000004986	GATB	99	69.433	Taeniopygia_guttata
ENSCVAG00000017180	gatb	100	74.854	ENSTRUG00000015238	gatb	93	74.854	Takifugu_rubripes
ENSCVAG00000017180	gatb	81	81.127	ENSTNIG00000003378	gatb	99	81.127	Tetraodon_nigroviridis
ENSCVAG00000017180	gatb	68	81.633	ENSTBEG00000009804	GATB	78	81.633	Tupaia_belangeri
ENSCVAG00000017180	gatb	99	66.801	ENSTTRG00000010679	GATB	89	66.801	Tursiops_truncatus
ENSCVAG00000017180	gatb	99	67.404	ENSUAMG00000021441	GATB	89	67.404	Ursus_americanus
ENSCVAG00000017180	gatb	99	67.606	ENSUMAG00000016157	GATB	89	67.606	Ursus_maritimus
ENSCVAG00000017180	gatb	77	76.727	ENSVPAG00000010844	GATB	69	76.727	Vicugna_pacos
ENSCVAG00000017180	gatb	99	67.404	ENSVVUG00000025083	GATB	88	82.692	Vulpes_vulpes
ENSCVAG00000017180	gatb	97	69.199	ENSXETG00000034167	GATB	97	69.512	Xenopus_tropicalis
ENSCVAG00000017180	gatb	99	88.755	ENSXMAG00000008071	gatb	90	93.506	Xiphophorus_maculatus