EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017240 (Gene tree)
Gene ID: 107093669
Gene Symbol: srsf5b
Alias: sfrs5b|wu:fe15e05|zgc:113907|zgc:92278
Full Name: serine/arginine-rich splicing factor 5-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 6994 bases
Position: chrKL652939.1:554307-561300
Accession: 107093669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014561	RRM_1	PF00076.22	9.5e-32	1	2
ENSCVAP00000014561	RRM_1	PF00076.22	9.5e-32	2	2
ENSCVAP00000029457	RRM_1	PF00076.22	1.7e-31	1	2
ENSCVAP00000029457	RRM_1	PF00076.22	1.7e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022438	-	2522	XM_015388868	ENSCVAP00000014561	325 (aa)	XP_015244354	UPI00074283A4
ENSCVAT00000022414	-	855	-	ENSCVAP00000029457	284 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000017240's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017240's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017240	srsf5b	52	46.821	ENSCVAG00000018617	-	64	44.375
ENSCVAG00000017240	srsf5b	54	38.333	ENSCVAG00000021417	srsf9	68	40.000
ENSCVAG00000017240	srsf5b	90	51.186	ENSCVAG00000016982	srsf5a	96	64.662
ENSCVAG00000017240	srsf5b	55	45.699	ENSCVAG00000005458	-	86	45.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017240	srsf5b	57	84.324	ENSG00000100650	SRSF5	98	75.000	Homo_sapiens
ENSCVAG00000017240	srsf5b	88	88.502	ENSAPOG00000008642	srsf5b	92	87.197	Acanthochromis_polyacanthus
ENSCVAG00000017240	srsf5b	63	82.039	ENSAMEG00000014574	SRSF5	67	82.540	Ailuropoda_melanoleuca
ENSCVAG00000017240	srsf5b	88	86.458	ENSACIG00000010742	srsf5b	81	98.450	Amphilophus_citrinellus
ENSCVAG00000017240	srsf5b	88	88.153	ENSAOCG00000005719	srsf5b	92	86.851	Amphiprion_ocellaris
ENSCVAG00000017240	srsf5b	88	88.153	ENSAPEG00000007830	srsf5b	92	86.851	Amphiprion_percula
ENSCVAG00000017240	srsf5b	88	86.411	ENSATEG00000019112	srsf5b	92	85.467	Anabas_testudineus
ENSCVAG00000017240	srsf5b	69	76.000	ENSAPLG00000014681	SRSF5	69	79.894	Anas_platyrhynchos
ENSCVAG00000017240	srsf5b	57	85.405	ENSACAG00000005143	SRSF5	69	83.598	Anolis_carolinensis
ENSCVAG00000017240	srsf5b	57	84.324	ENSANAG00000027977	-	73	91.667	Aotus_nancymaae
ENSCVAG00000017240	srsf5b	88	87.108	ENSACLG00000026424	srsf5b	92	86.851	Astatotilapia_calliptera
ENSCVAG00000017240	srsf5b	58	94.180	ENSAMXG00000011932	srsf5b	84	93.750	Astyanax_mexicanus
ENSCVAG00000017240	srsf5b	63	82.039	ENSBTAG00000011596	SRSF5	67	82.540	Bos_taurus
ENSCVAG00000017240	srsf5b	57	84.324	ENSCJAG00000014884	SRSF5	73	91.667	Callithrix_jacchus
ENSCVAG00000017240	srsf5b	63	82.039	ENSCAFG00000016589	SRSF5	67	82.540	Canis_familiaris
ENSCVAG00000017240	srsf5b	63	82.039	ENSCAFG00020005661	SRSF5	67	82.540	Canis_lupus_dingo
ENSCVAG00000017240	srsf5b	70	75.439	ENSCHIG00000016794	SRSF5	66	82.540	Capra_hircus
ENSCVAG00000017240	srsf5b	57	84.324	ENSTSYG00000007786	SRSF5	73	91.667	Carlito_syrichta
ENSCVAG00000017240	srsf5b	63	82.039	ENSCAPG00000008801	SRSF5	66	82.540	Cavia_aperea
ENSCVAG00000017240	srsf5b	57	84.324	ENSCPOG00000039926	SRSF5	66	82.540	Cavia_porcellus
ENSCVAG00000017240	srsf5b	57	84.324	ENSCCAG00000029002	SRSF5	73	91.667	Cebus_capucinus
ENSCVAG00000017240	srsf5b	57	84.324	ENSCATG00000045051	SRSF5	73	91.667	Cercocebus_atys
ENSCVAG00000017240	srsf5b	70	78.947	ENSCLAG00000004755	SRSF5	67	82.540	Chinchilla_lanigera
ENSCVAG00000017240	srsf5b	57	84.324	ENSCSAG00000013041	SRSF5	67	82.540	Chlorocebus_sabaeus
ENSCVAG00000017240	srsf5b	71	78.017	ENSCPBG00000021653	SRSF5	68	83.069	Chrysemys_picta_bellii
ENSCVAG00000017240	srsf5b	57	84.324	ENSCANG00000030560	SRSF5	73	91.667	Colobus_angolensis_palliatus
ENSCVAG00000017240	srsf5b	63	77.073	ENSCGRG00001015339	Srsf5	68	82.540	Cricetulus_griseus_chok1gshd
ENSCVAG00000017240	srsf5b	68	76.471	ENSCGRG00000009833	Srsf5	68	82.540	Cricetulus_griseus_crigri
ENSCVAG00000017240	srsf5b	82	85.448	ENSCSEG00000003801	srsf5b	93	77.320	Cynoglossus_semilaevis
ENSCVAG00000017240	srsf5b	63	92.195	ENSDARG00000027734	srsf5b	90	88.281	Danio_rerio
ENSCVAG00000017240	srsf5b	71	77.586	ENSDNOG00000006160	SRSF5	68	82.540	Dasypus_novemcinctus
ENSCVAG00000017240	srsf5b	63	77.073	ENSDORG00000003989	Srsf5	68	82.540	Dipodomys_ordii
ENSCVAG00000017240	srsf5b	71	73.593	ENSETEG00000020396	SRSF5	68	78.191	Echinops_telfairi
ENSCVAG00000017240	srsf5b	58	61.735	ENSEBUG00000006229	srsf5b	69	62.827	Eptatretus_burgeri
ENSCVAG00000017240	srsf5b	63	82.039	ENSEASG00005016615	SRSF5	67	82.540	Equus_asinus_asinus
ENSCVAG00000017240	srsf5b	64	82.212	ENSECAG00000026873	SRSF5	88	75.000	Equus_caballus
ENSCVAG00000017240	srsf5b	88	72.078	ENSELUG00000019852	srsf5b	85	81.250	Esox_lucius
ENSCVAG00000017240	srsf5b	63	82.039	ENSFCAG00000008848	SRSF5	72	91.667	Felis_catus
ENSCVAG00000017240	srsf5b	71	75.758	ENSFALG00000004979	SRSF5	68	80.319	Ficedula_albicollis
ENSCVAG00000017240	srsf5b	70	71.053	ENSFDAG00000011562	SRSF5	68	82.540	Fukomys_damarensis
ENSCVAG00000017240	srsf5b	89	90.311	ENSFHEG00000009476	srsf5b	89	89.273	Fundulus_heteroclitus
ENSCVAG00000017240	srsf5b	58	79.646	ENSGMOG00000000595	srsf5b	99	79.646	Gadus_morhua
ENSCVAG00000017240	srsf5b	57	81.522	ENSGALG00000009421	SRSF5	88	75.781	Gallus_gallus
ENSCVAG00000017240	srsf5b	100	90.462	ENSGAFG00000002865	srsf5b	100	90.462	Gambusia_affinis
ENSCVAG00000017240	srsf5b	87	53.846	ENSGACG00000007834	srsf5b	86	83.824	Gasterosteus_aculeatus
ENSCVAG00000017240	srsf5b	71	78.017	ENSGAGG00000004447	SRSF5	68	83.069	Gopherus_agassizii
ENSCVAG00000017240	srsf5b	57	84.324	ENSGGOG00000016462	SRSF5	73	91.667	Gorilla_gorilla
ENSCVAG00000017240	srsf5b	88	86.760	ENSHBUG00000012462	srsf5b	93	99.219	Haplochromis_burtoni
ENSCVAG00000017240	srsf5b	63	81.553	ENSHGLG00000010147	SRSF5	67	82.011	Heterocephalus_glaber_female
ENSCVAG00000017240	srsf5b	63	81.553	ENSHGLG00100015328	SRSF5	67	82.011	Heterocephalus_glaber_male
ENSCVAG00000017240	srsf5b	76	49.425	ENSHGLG00100000095	-	62	67.568	Heterocephalus_glaber_male
ENSCVAG00000017240	srsf5b	58	89.062	ENSHCOG00000005592	srsf5b	66	86.979	Hippocampus_comes
ENSCVAG00000017240	srsf5b	63	82.039	ENSSTOG00000020672	SRSF5	67	82.540	Ictidomys_tridecemlineatus
ENSCVAG00000017240	srsf5b	63	82.524	ENSJJAG00000001688	Srsf5	67	82.540	Jaculus_jaculus
ENSCVAG00000017240	srsf5b	88	88.850	ENSKMAG00000020486	srsf5b	84	96.875	Kryptolebias_marmoratus
ENSCVAG00000017240	srsf5b	88	82.699	ENSLBEG00000013647	srsf5b	93	85.223	Labrus_bergylta
ENSCVAG00000017240	srsf5b	64	83.575	ENSLACG00000005874	SRSF5	68	82.979	Latimeria_chalumnae
ENSCVAG00000017240	srsf5b	57	86.243	ENSLOCG00000012438	srsf5b	70	82.383	Lepisosteus_oculatus
ENSCVAG00000017240	srsf5b	70	75.000	ENSLAFG00000005260	SRSF5	67	82.011	Loxodonta_africana
ENSCVAG00000017240	srsf5b	57	84.324	ENSMFAG00000002393	SRSF5	73	91.667	Macaca_fascicularis
ENSCVAG00000017240	srsf5b	57	84.324	ENSMNEG00000030872	SRSF5	73	91.667	Macaca_nemestrina
ENSCVAG00000017240	srsf5b	57	84.324	ENSMLEG00000030017	SRSF5	73	91.667	Mandrillus_leucophaeus
ENSCVAG00000017240	srsf5b	83	86.667	ENSMAMG00000002673	srsf5b	92	81.315	Mastacembelus_armatus
ENSCVAG00000017240	srsf5b	88	87.108	ENSMZEG00005003550	srsf5b	92	86.851	Maylandia_zebra
ENSCVAG00000017240	srsf5b	68	76.471	ENSMAUG00000009544	Srsf5	67	82.540	Mesocricetus_auratus
ENSCVAG00000017240	srsf5b	63	77.073	ENSMICG00000037432	-	73	91.667	Microcebus_murinus
ENSCVAG00000017240	srsf5b	68	76.471	ENSMOCG00000013134	Srsf5	67	82.540	Microtus_ochrogaster
ENSCVAG00000017240	srsf5b	57	95.676	ENSMMOG00000000137	srsf5b	80	95.385	Mola_mola
ENSCVAG00000017240	srsf5b	71	78.017	ENSMODG00000011362	SRSF5	68	83.069	Monodelphis_domestica
ENSCVAG00000017240	srsf5b	88	85.069	ENSMALG00000021875	srsf5b	84	98.450	Monopterus_albus
ENSCVAG00000017240	srsf5b	68	76.471	ENSMUSG00000021134	Srsf5	96	90.909	Mus_musculus
ENSCVAG00000017240	srsf5b	68	76.471	MGP_PahariEiJ_G0029659	Srsf5	68	82.540	Mus_pahari
ENSCVAG00000017240	srsf5b	63	82.039	ENSMPUG00000007458	SRSF5	67	82.540	Mustela_putorius_furo
ENSCVAG00000017240	srsf5b	57	84.324	ENSMLUG00000011939	SRSF5	65	82.540	Myotis_lucifugus
ENSCVAG00000017240	srsf5b	68	76.471	ENSNGAG00000010073	-	67	82.540	Nannospalax_galili
ENSCVAG00000017240	srsf5b	88	84.775	ENSNBRG00000001285	srsf5b	92	83.849	Neolamprologus_brichardi
ENSCVAG00000017240	srsf5b	57	84.324	ENSNLEG00000001615	SRSF5	73	91.667	Nomascus_leucogenys
ENSCVAG00000017240	srsf5b	57	84.324	ENSOPRG00000008286	SRSF5	65	82.540	Ochotona_princeps
ENSCVAG00000017240	srsf5b	75	71.311	ENSODEG00000000700	-	69	80.423	Octodon_degus
ENSCVAG00000017240	srsf5b	70	75.439	ENSODEG00000013469	-	68	82.540	Octodon_degus
ENSCVAG00000017240	srsf5b	88	87.108	ENSONIG00000005759	srsf5b	92	86.851	Oreochromis_niloticus
ENSCVAG00000017240	srsf5b	70	72.807	ENSOANG00000013336	SRSF5	68	78.836	Ornithorhynchus_anatinus
ENSCVAG00000017240	srsf5b	63	82.039	ENSOCUG00000009274	SRSF5	66	82.540	Oryctolagus_cuniculus
ENSCVAG00000017240	srsf5b	88	77.228	ENSORLG00000029854	srsf5b	93	75.920	Oryzias_latipes
ENSCVAG00000017240	srsf5b	88	83.391	ENSORLG00015001720	srsf5b	93	83.849	Oryzias_latipes_hsok
ENSCVAG00000017240	srsf5b	89	82.877	ENSOMEG00000020690	srsf5b	67	77.320	Oryzias_melastigma
ENSCVAG00000017240	srsf5b	63	82.039	ENSOGAG00000015122	SRSF5	67	82.540	Otolemur_garnettii
ENSCVAG00000017240	srsf5b	57	84.324	ENSPPAG00000029921	SRSF5	73	91.667	Pan_paniscus
ENSCVAG00000017240	srsf5b	63	82.039	ENSPPRG00000012903	SRSF5	72	91.667	Panthera_pardus
ENSCVAG00000017240	srsf5b	63	82.039	ENSPTIG00000018589	SRSF5	72	91.667	Panthera_tigris_altaica
ENSCVAG00000017240	srsf5b	57	84.324	ENSPTRG00000006488	SRSF5	73	91.667	Pan_troglodytes
ENSCVAG00000017240	srsf5b	57	84.324	ENSPANG00000021091	SRSF5	73	91.667	Papio_anubis
ENSCVAG00000017240	srsf5b	57	84.865	ENSPSIG00000012522	SRSF5	69	83.069	Pelodiscus_sinensis
ENSCVAG00000017240	srsf5b	63	77.073	ENSPEMG00000020173	Srsf5	68	82.540	Peromyscus_maniculatus_bairdii
ENSCVAG00000017240	srsf5b	58	61.111	ENSPMAG00000007790	srsf5b	68	60.914	Petromyzon_marinus
ENSCVAG00000017240	srsf5b	71	78.017	ENSPCIG00000011877	SRSF5	68	83.069	Phascolarctos_cinereus
ENSCVAG00000017240	srsf5b	100	90.462	ENSPFOG00000017700	srsf5b	100	90.462	Poecilia_formosa
ENSCVAG00000017240	srsf5b	88	90.625	ENSPLAG00000006480	srsf5b	90	86.552	Poecilia_latipinna
ENSCVAG00000017240	srsf5b	100	90.462	ENSPMEG00000012751	srsf5b	100	90.462	Poecilia_mexicana
ENSCVAG00000017240	srsf5b	100	90.462	ENSPREG00000010381	srsf5b	100	90.462	Poecilia_reticulata
ENSCVAG00000017240	srsf5b	57	84.324	ENSPPYG00000005945	SRSF5	67	82.540	Pongo_abelii
ENSCVAG00000017240	srsf5b	63	82.039	ENSPCOG00000014442	SRSF5	88	75.000	Propithecus_coquereli
ENSCVAG00000017240	srsf5b	100	77.538	ENSPNYG00000002669	srsf5b	94	99.219	Pundamilia_nyererei
ENSCVAG00000017240	srsf5b	90	75.510	ENSPNAG00000011262	srsf5b	84	88.281	Pygocentrus_nattereri
ENSCVAG00000017240	srsf5b	63	77.073	ENSRNOG00000005513	Srsf5	68	82.540	Rattus_norvegicus
ENSCVAG00000017240	srsf5b	57	84.324	ENSRBIG00000013003	SRSF5	73	91.667	Rhinopithecus_bieti
ENSCVAG00000017240	srsf5b	57	84.324	ENSRROG00000043407	SRSF5	73	91.667	Rhinopithecus_roxellana
ENSCVAG00000017240	srsf5b	57	84.324	ENSSBOG00000030784	SRSF5	73	91.667	Saimiri_boliviensis_boliviensis
ENSCVAG00000017240	srsf5b	71	78.017	ENSSHAG00000002871	SRSF5	68	83.069	Sarcophilus_harrisii
ENSCVAG00000017240	srsf5b	89	79.100	ENSSMAG00000019728	srsf5b	92	81.063	Scophthalmus_maximus
ENSCVAG00000017240	srsf5b	86	86.022	ENSSDUG00000005766	srsf5b	92	86.380	Seriola_dumerili
ENSCVAG00000017240	srsf5b	88	86.760	ENSSLDG00000023255	srsf5b	84	98.438	Seriola_lalandi_dorsalis
ENSCVAG00000017240	srsf5b	63	69.756	ENSSARG00000001059	SRSF5	96	48.375	Sorex_araneus
ENSCVAG00000017240	srsf5b	57	80.829	ENSSPUG00000002464	SRSF5	89	72.263	Sphenodon_punctatus
ENSCVAG00000017240	srsf5b	88	88.502	ENSSPAG00000015325	srsf5b	92	87.197	Stegastes_partitus
ENSCVAG00000017240	srsf5b	63	82.039	ENSSSCG00000032583	SRSF5	67	82.540	Sus_scrofa
ENSCVAG00000017240	srsf5b	71	75.758	ENSTGUG00000011425	SRSF5	68	80.319	Taeniopygia_guttata
ENSCVAG00000017240	srsf5b	58	93.617	ENSTRUG00000017811	srsf5b	96	83.721	Takifugu_rubripes
ENSCVAG00000017240	srsf5b	89	80.208	ENSTNIG00000016411	srsf5b	67	92.021	Tetraodon_nigroviridis
ENSCVAG00000017240	srsf5b	57	82.162	ENSTBEG00000001972	SRSF5	66	78.836	Tupaia_belangeri
ENSCVAG00000017240	srsf5b	70	75.330	ENSTTRG00000003318	SRSF5	66	82.447	Tursiops_truncatus
ENSCVAG00000017240	srsf5b	63	82.039	ENSUAMG00000014184	SRSF5	67	82.540	Ursus_americanus
ENSCVAG00000017240	srsf5b	59	83.117	ENSUMAG00000009827	SRSF5	67	82.540	Ursus_maritimus
ENSCVAG00000017240	srsf5b	63	82.039	ENSVPAG00000006448	SRSF5	67	82.540	Vicugna_pacos
ENSCVAG00000017240	srsf5b	63	82.039	ENSVVUG00000003790	SRSF5	67	82.540	Vulpes_vulpes
ENSCVAG00000017240	srsf5b	58	82.979	ENSXETG00000002211	srsf5	68	83.598	Xenopus_tropicalis
ENSCVAG00000017240	srsf5b	88	81.944	ENSXCOG00000001570	srsf5b	89	84.138	Xiphophorus_couchianus
ENSCVAG00000017240	srsf5b	88	89.236	ENSXMAG00000026416	srsf5b	84	98.450	Xiphophorus_maculatus