EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017268 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 7308 bases
Position: chrKL652812.1:77592-84899
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014567	Piwi	PF02171.17	5.9e-83	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022425	-	894	-	ENSCVAP00000014567	297 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000017268's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017268's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017268	-	67	80.093	ENSCVAG00000017336	ago4	86	80.093

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017268	-	70	91.549	ENSCGRG00000010670	Ago3	90	93.103	Cricetulus_griseus_crigri
ENSCVAG00000017268	-	70	93.427	ENSHCOG00000005654	ago3a	56	93.427	Hippocampus_comes
ENSCVAG00000017268	-	79	80.769	ENSKMAG00000004179	-	91	80.769	Kryptolebias_marmoratus
ENSCVAG00000017268	-	70	91.080	MGP_CAROLIEiJ_G0026477	Ago3	99	85.625	Mus_caroli
ENSCVAG00000017268	-	70	91.080	ENSMUSG00000028842	Ago3	99	85.625	Mus_musculus
ENSCVAG00000017268	-	70	91.080	MGP_PahariEiJ_G0028808	Ago3	66	90.526	Mus_pahari
ENSCVAG00000017268	-	70	91.080	MGP_SPRETEiJ_G0027456	Ago3	99	85.625	Mus_spretus
ENSCVAG00000017268	-	67	94.660	ENSPKIG00000000146	AGO3	85	94.660	Paramormyrops_kingsleyae
ENSCVAG00000017268	-	70	81.043	ENSTNIG00000005822	-	85	81.043	Tetraodon_nigroviridis
ENSCVAG00000017268	-	58	90.960	ENSTNIG00000001609	-	83	90.960	Tetraodon_nigroviridis
ENSCVAG00000017268	-	70	91.549	ENSUMAG00000002033	-	56	91.549	Ursus_maritimus