EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000017342 (Gene tree)
Gene ID: 107100511
Gene Symbol: trmt13
Alias: ccdc76|fe24e02|wu:fe24e02|zgc:110839
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8739 bases
Position: chrKL653480.1:95313-104051
Accession: 107100511
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000029512	TRM13	PF05206.14	9.7e-80	1	1
ENSCVAP00000029512	zf-U11-48K	PF05253.12	4.6e-09	1	1
ENSCVAP00000029512	zf-TRM13_CCCH	PF11722.8	5.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022542	-	2831	XM_015399022	ENSCVAP00000029512	493 (aa)	XP_015254508	-

Gene Model

Click here to download ENSCVAG00000017342's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017342's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017342	trmt13	93	49.684	ENSG00000122435	TRMT13	96	51.429	Homo_sapiens
ENSCVAG00000017342	trmt13	94	67.339	ENSAPOG00000015131	trmt13	99	69.877	Acanthochromis_polyacanthus
ENSCVAG00000017342	trmt13	93	50.316	ENSAMEG00000008917	TRMT13	95	49.896	Ailuropoda_melanoleuca
ENSCVAG00000017342	trmt13	94	70.362	ENSACIG00000005804	trmt13	96	67.660	Amphilophus_citrinellus
ENSCVAG00000017342	trmt13	94	69.796	ENSAOCG00000023585	trmt13	99	69.796	Amphiprion_ocellaris
ENSCVAG00000017342	trmt13	94	69.388	ENSAPEG00000004025	trmt13	99	69.388	Amphiprion_percula
ENSCVAG00000017342	trmt13	95	70.339	ENSATEG00000006597	trmt13	97	70.339	Anabas_testudineus
ENSCVAG00000017342	trmt13	85	53.917	ENSAPLG00000014924	TRMT13	98	53.226	Anas_platyrhynchos
ENSCVAG00000017342	trmt13	93	51.368	ENSACAG00000003498	TRMT13	97	51.271	Anolis_carolinensis
ENSCVAG00000017342	trmt13	93	49.684	ENSANAG00000019525	TRMT13	95	48.421	Aotus_nancymaae
ENSCVAG00000017342	trmt13	94	69.828	ENSACLG00000020018	trmt13	99	69.828	Astatotilapia_calliptera
ENSCVAG00000017342	trmt13	94	51.667	ENSAMXG00000017963	trmt13	98	52.708	Astyanax_mexicanus
ENSCVAG00000017342	trmt13	93	49.474	ENSBTAG00000015781	TRMT13	95	48.632	Bos_taurus
ENSCVAG00000017342	trmt13	93	49.057	ENSCJAG00000000200	TRMT13	89	56.849	Callithrix_jacchus
ENSCVAG00000017342	trmt13	62	46.729	ENSCAFG00000020021	TRMT13	97	45.794	Canis_familiaris
ENSCVAG00000017342	trmt13	58	53.287	ENSCAFG00020011572	TRMT13	95	53.287	Canis_lupus_dingo
ENSCVAG00000017342	trmt13	96	48.975	ENSCHIG00000015395	TRMT13	98	47.844	Capra_hircus
ENSCVAG00000017342	trmt13	94	50.207	ENSTSYG00000010811	TRMT13	95	56.701	Carlito_syrichta
ENSCVAG00000017342	trmt13	72	39.011	ENSCAPG00000009085	TRMT13	92	40.625	Cavia_aperea
ENSCVAG00000017342	trmt13	94	50.630	ENSCPOG00000000694	TRMT13	96	49.370	Cavia_porcellus
ENSCVAG00000017342	trmt13	93	49.895	ENSCCAG00000023772	TRMT13	95	48.632	Cebus_capucinus
ENSCVAG00000017342	trmt13	93	49.895	ENSCATG00000033556	TRMT13	95	48.632	Cercocebus_atys
ENSCVAG00000017342	trmt13	85	50.588	ENSCLAG00000008220	TRMT13	98	50.353	Chinchilla_lanigera
ENSCVAG00000017342	trmt13	93	50.000	ENSCSAG00000001506	TRMT13	95	48.734	Chlorocebus_sabaeus
ENSCVAG00000017342	trmt13	96	51.753	ENSCPBG00000026671	TRMT13	98	50.928	Chrysemys_picta_bellii
ENSCVAG00000017342	trmt13	93	49.684	ENSCANG00000034659	TRMT13	95	48.421	Colobus_angolensis_palliatus
ENSCVAG00000017342	trmt13	94	49.068	ENSCGRG00001021601	Trmt13	96	48.866	Cricetulus_griseus_chok1gshd
ENSCVAG00000017342	trmt13	95	64.392	ENSCSEG00000000591	trmt13	99	64.103	Cynoglossus_semilaevis
ENSCVAG00000017342	trmt13	95	55.297	ENSDARG00000102846	trmt13	98	54.468	Danio_rerio
ENSCVAG00000017342	trmt13	55	54.122	ENSDNOG00000001710	TRMT13	80	54.122	Dasypus_novemcinctus
ENSCVAG00000017342	trmt13	93	49.683	ENSDORG00000015808	Trmt13	95	49.156	Dipodomys_ordii
ENSCVAG00000017342	trmt13	96	33.878	FBgn0037435	CG18048	97	34.082	Drosophila_melanogaster
ENSCVAG00000017342	trmt13	93	43.892	ENSETEG00000005819	TRMT13	96	43.478	Echinops_telfairi
ENSCVAG00000017342	trmt13	92	44.563	ENSEBUG00000014444	trmt13	96	44.563	Eptatretus_burgeri
ENSCVAG00000017342	trmt13	93	50.422	ENSEASG00005015918	TRMT13	95	49.156	Equus_asinus_asinus
ENSCVAG00000017342	trmt13	93	49.789	ENSECAG00000022626	TRMT13	95	49.156	Equus_caballus
ENSCVAG00000017342	trmt13	72	56.364	ENSEEUG00000000294	TRMT13	72	56.364	Erinaceus_europaeus
ENSCVAG00000017342	trmt13	94	53.862	ENSELUG00000003803	trmt13	98	54.280	Esox_lucius
ENSCVAG00000017342	trmt13	93	49.476	ENSFCAG00000030618	TRMT13	98	51.748	Felis_catus
ENSCVAG00000017342	trmt13	93	53.830	ENSFALG00000002424	TRMT13	95	53.602	Ficedula_albicollis
ENSCVAG00000017342	trmt13	93	49.156	ENSFDAG00000006342	TRMT13	95	48.632	Fukomys_damarensis
ENSCVAG00000017342	trmt13	80	77.861	ENSFHEG00000022954	trmt13	100	78.708	Fundulus_heteroclitus
ENSCVAG00000017342	trmt13	92	52.193	ENSGMOG00000013223	trmt13	100	52.193	Gadus_morhua
ENSCVAG00000017342	trmt13	92	53.404	ENSGALG00000005290	TRMT13	96	53.586	Gallus_gallus
ENSCVAG00000017342	trmt13	79	71.979	ENSGAFG00000001577	trmt13	85	71.979	Gambusia_affinis
ENSCVAG00000017342	trmt13	94	71.183	ENSGACG00000013428	trmt13	98	71.613	Gasterosteus_aculeatus
ENSCVAG00000017342	trmt13	96	51.646	ENSGAGG00000023303	TRMT13	99	55.017	Gopherus_agassizii
ENSCVAG00000017342	trmt13	93	49.474	ENSGGOG00000005616	TRMT13	95	48.434	Gorilla_gorilla
ENSCVAG00000017342	trmt13	94	69.913	ENSHBUG00000007754	trmt13	99	69.913	Haplochromis_burtoni
ENSCVAG00000017342	trmt13	93	49.367	ENSHGLG00000002164	TRMT13	95	48.312	Heterocephalus_glaber_female
ENSCVAG00000017342	trmt13	93	49.367	ENSHGLG00100001618	TRMT13	95	48.312	Heterocephalus_glaber_male
ENSCVAG00000017342	trmt13	94	57.325	ENSHCOG00000020553	trmt13	98	56.688	Hippocampus_comes
ENSCVAG00000017342	trmt13	94	52.878	ENSIPUG00000024787	trmt13	98	52.766	Ictalurus_punctatus
ENSCVAG00000017342	trmt13	93	48.945	ENSSTOG00000013483	TRMT13	95	48.536	Ictidomys_tridecemlineatus
ENSCVAG00000017342	trmt13	93	50.000	ENSJJAG00000018012	Trmt13	96	48.745	Jaculus_jaculus
ENSCVAG00000017342	trmt13	62	69.381	ENSKMAG00000007639	trmt13	92	69.381	Kryptolebias_marmoratus
ENSCVAG00000017342	trmt13	94	69.742	ENSLBEG00000020238	trmt13	99	69.742	Labrus_bergylta
ENSCVAG00000017342	trmt13	95	51.782	ENSLACG00000013153	TRMT13	99	50.369	Latimeria_chalumnae
ENSCVAG00000017342	trmt13	94	52.421	ENSLOCG00000000418	trmt13	97	52.211	Lepisosteus_oculatus
ENSCVAG00000017342	trmt13	74	49.077	ENSLAFG00000002383	TRMT13	98	48.285	Loxodonta_africana
ENSCVAG00000017342	trmt13	93	49.474	ENSMFAG00000034681	TRMT13	95	48.643	Macaca_fascicularis
ENSCVAG00000017342	trmt13	93	49.474	ENSMMUG00000004243	TRMT13	95	48.643	Macaca_mulatta
ENSCVAG00000017342	trmt13	93	49.474	ENSMNEG00000036102	TRMT13	95	48.643	Macaca_nemestrina
ENSCVAG00000017342	trmt13	93	49.684	ENSMLEG00000034258	TRMT13	95	48.421	Mandrillus_leucophaeus
ENSCVAG00000017342	trmt13	93	71.861	ENSMAMG00000016597	trmt13	96	71.861	Mastacembelus_armatus
ENSCVAG00000017342	trmt13	94	69.612	ENSMZEG00005020959	trmt13	99	69.612	Maylandia_zebra
ENSCVAG00000017342	trmt13	85	54.756	ENSMGAG00000006970	TRMT13	98	54.292	Meleagris_gallopavo
ENSCVAG00000017342	trmt13	94	48.857	ENSMAUG00000010448	Trmt13	96	48.857	Mesocricetus_auratus
ENSCVAG00000017342	trmt13	93	50.737	ENSMICG00000005283	TRMT13	96	51.429	Microcebus_murinus
ENSCVAG00000017342	trmt13	94	50.000	ENSMOCG00000019914	Trmt13	96	49.478	Microtus_ochrogaster
ENSCVAG00000017342	trmt13	56	61.957	ENSMMOG00000007762	trmt13	90	61.957	Mola_mola
ENSCVAG00000017342	trmt13	95	49.388	ENSMODG00000003646	TRMT13	97	49.080	Monodelphis_domestica
ENSCVAG00000017342	trmt13	95	67.728	ENSMALG00000020965	trmt13	98	67.728	Monopterus_albus
ENSCVAG00000017342	trmt13	94	50.314	MGP_CAROLIEiJ_G0025568	Trmt13	98	51.042	Mus_caroli
ENSCVAG00000017342	trmt13	94	50.209	ENSMUSG00000033439	Trmt13	98	51.042	Mus_musculus
ENSCVAG00000017342	trmt13	94	49.793	MGP_PahariEiJ_G0027014	Trmt13	98	50.000	Mus_pahari
ENSCVAG00000017342	trmt13	94	50.313	MGP_SPRETEiJ_G0026518	Trmt13	98	51.042	Mus_spretus
ENSCVAG00000017342	trmt13	74	49.596	ENSMPUG00000002078	-	95	49.057	Mustela_putorius_furo
ENSCVAG00000017342	trmt13	93	50.633	ENSMLUG00000002124	TRMT13	95	49.684	Myotis_lucifugus
ENSCVAG00000017342	trmt13	95	64.454	ENSNBRG00000006783	trmt13	98	64.454	Neolamprologus_brichardi
ENSCVAG00000017342	trmt13	93	49.474	ENSNLEG00000035917	TRMT13	95	48.434	Nomascus_leucogenys
ENSCVAG00000017342	trmt13	51	47.410	ENSMEUG00000013346	-	95	47.410	Notamacropus_eugenii
ENSCVAG00000017342	trmt13	55	54.545	ENSOPRG00000012048	TRMT13	54	54.545	Ochotona_princeps
ENSCVAG00000017342	trmt13	94	70.996	ENSONIG00000004574	trmt13	99	70.996	Oreochromis_niloticus
ENSCVAG00000017342	trmt13	85	50.455	ENSOANG00000012057	TRMT13	96	50.679	Ornithorhynchus_anatinus
ENSCVAG00000017342	trmt13	93	49.260	ENSOCUG00000023095	TRMT13	96	48.842	Oryctolagus_cuniculus
ENSCVAG00000017342	trmt13	95	64.768	ENSORLG00000003320	trmt13	99	64.693	Oryzias_latipes
ENSCVAG00000017342	trmt13	94	65.806	ENSORLG00020005972	trmt13	98	65.806	Oryzias_latipes_hni
ENSCVAG00000017342	trmt13	95	71.429	ENSORLG00015002270	trmt13	99	71.429	Oryzias_latipes_hsok
ENSCVAG00000017342	trmt13	95	70.085	ENSOMEG00000006724	trmt13	95	70.085	Oryzias_melastigma
ENSCVAG00000017342	trmt13	94	49.372	ENSOGAG00000005618	TRMT13	93	48.536	Otolemur_garnettii
ENSCVAG00000017342	trmt13	96	48.975	ENSOARG00000017983	TRMT13	98	47.844	Ovis_aries
ENSCVAG00000017342	trmt13	93	50.000	ENSPPAG00000043736	TRMT13	95	48.643	Pan_paniscus
ENSCVAG00000017342	trmt13	93	49.476	ENSPPRG00000003424	TRMT13	98	51.748	Panthera_pardus
ENSCVAG00000017342	trmt13	93	49.476	ENSPTIG00000018598	TRMT13	98	51.748	Panthera_tigris_altaica
ENSCVAG00000017342	trmt13	94	49.895	ENSPTRG00000001001	TRMT13	96	48.542	Pan_troglodytes
ENSCVAG00000017342	trmt13	93	49.684	ENSPANG00000007598	TRMT13	95	48.421	Papio_anubis
ENSCVAG00000017342	trmt13	94	54.487	ENSPKIG00000001514	trmt13	98	54.077	Paramormyrops_kingsleyae
ENSCVAG00000017342	trmt13	85	51.152	ENSPSIG00000012703	TRMT13	99	50.000	Pelodiscus_sinensis
ENSCVAG00000017342	trmt13	95	60.897	ENSPMGG00000013298	trmt13	95	60.897	Periophthalmus_magnuspinnatus
ENSCVAG00000017342	trmt13	93	49.266	ENSPEMG00000000275	Trmt13	95	49.266	Peromyscus_maniculatus_bairdii
ENSCVAG00000017342	trmt13	93	47.853	ENSPMAG00000000823	trmt13	98	46.939	Petromyzon_marinus
ENSCVAG00000017342	trmt13	94	51.139	ENSPCIG00000007699	TRMT13	97	50.617	Phascolarctos_cinereus
ENSCVAG00000017342	trmt13	92	70.961	ENSPFOG00000008675	trmt13	94	70.961	Poecilia_formosa
ENSCVAG00000017342	trmt13	94	71.459	ENSPLAG00000009709	trmt13	100	71.459	Poecilia_latipinna
ENSCVAG00000017342	trmt13	94	71.030	ENSPMEG00000022954	trmt13	100	71.030	Poecilia_mexicana
ENSCVAG00000017342	trmt13	79	73.402	ENSPREG00000005645	trmt13	97	68.456	Poecilia_reticulata
ENSCVAG00000017342	trmt13	94	48.971	ENSPPYG00000001120	TRMT13	98	47.737	Pongo_abelii
ENSCVAG00000017342	trmt13	93	49.684	ENSPCAG00000002340	TRMT13	95	49.684	Procavia_capensis
ENSCVAG00000017342	trmt13	93	49.263	ENSPCOG00000017984	TRMT13	95	48.852	Propithecus_coquereli
ENSCVAG00000017342	trmt13	93	49.372	ENSPVAG00000017430	TRMT13	95	49.582	Pteropus_vampyrus
ENSCVAG00000017342	trmt13	94	66.809	ENSPNYG00000013690	trmt13	99	66.809	Pundamilia_nyererei
ENSCVAG00000017342	trmt13	94	52.866	ENSPNAG00000022130	trmt13	98	51.907	Pygocentrus_nattereri
ENSCVAG00000017342	trmt13	94	50.311	ENSRNOG00000015140	Trmt13	93	49.275	Rattus_norvegicus
ENSCVAG00000017342	trmt13	93	49.684	ENSRBIG00000037686	TRMT13	95	48.421	Rhinopithecus_bieti
ENSCVAG00000017342	trmt13	93	49.684	ENSRROG00000044057	TRMT13	95	48.421	Rhinopithecus_roxellana
ENSCVAG00000017342	trmt13	93	50.420	ENSSBOG00000026541	TRMT13	95	48.842	Saimiri_boliviensis_boliviensis
ENSCVAG00000017342	trmt13	87	50.559	ENSSHAG00000005213	TRMT13	95	50.336	Sarcophilus_harrisii
ENSCVAG00000017342	trmt13	96	56.604	ENSSFOG00015017560	trmt13	99	56.604	Scleropages_formosus
ENSCVAG00000017342	trmt13	94	68.220	ENSSMAG00000014592	trmt13	96	68.220	Scophthalmus_maximus
ENSCVAG00000017342	trmt13	94	71.368	ENSSDUG00000015508	trmt13	96	71.488	Seriola_dumerili
ENSCVAG00000017342	trmt13	94	71.429	ENSSLDG00000019060	trmt13	97	71.429	Seriola_lalandi_dorsalis
ENSCVAG00000017342	trmt13	94	44.742	ENSSARG00000010344	TRMT13	98	43.505	Sorex_araneus
ENSCVAG00000017342	trmt13	92	51.812	ENSSPUG00000016339	TRMT13	98	50.746	Sphenodon_punctatus
ENSCVAG00000017342	trmt13	94	70.664	ENSSPAG00000011922	trmt13	99	70.789	Stegastes_partitus
ENSCVAG00000017342	trmt13	94	49.790	ENSSSCG00000006869	TRMT13	96	48.529	Sus_scrofa
ENSCVAG00000017342	trmt13	93	53.503	ENSTGUG00000005253	TRMT13	98	52.442	Taeniopygia_guttata
ENSCVAG00000017342	trmt13	94	62.368	ENSTRUG00000008400	trmt13	99	62.264	Takifugu_rubripes
ENSCVAG00000017342	trmt13	83	38.810	ENSTBEG00000008911	TRMT13	98	37.857	Tupaia_belangeri
ENSCVAG00000017342	trmt13	93	47.992	ENSUAMG00000017251	TRMT13	95	47.569	Ursus_americanus
ENSCVAG00000017342	trmt13	93	50.316	ENSUMAG00000007901	TRMT13	98	49.548	Ursus_maritimus
ENSCVAG00000017342	trmt13	85	39.261	ENSVPAG00000001034	TRMT13	97	38.479	Vicugna_pacos
ENSCVAG00000017342	trmt13	93	49.474	ENSVVUG00000021996	TRMT13	95	48.842	Vulpes_vulpes
ENSCVAG00000017342	trmt13	94	51.168	ENSXETG00000013204	trmt13	98	50.644	Xenopus_tropicalis
ENSCVAG00000017342	trmt13	94	70.815	ENSXMAG00000010765	trmt13	100	70.815	Xiphophorus_maculatus