EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000017355 (Gene tree)
Gene ID: 107084800
Gene Symbol: yrdc
Alias: zgc:162301
Full Name: yrdC N6-threonylcarbamoyltransferase domain containing
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 7863 bases
Position: chrKL652506.1:1987624-1995486
Accession: 107084800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000029522	Sua5_yciO_yrdC	PF01300.18	3.9e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022581	-	2139	XM_015374823	ENSCVAP00000029522	264 (aa)	XP_015230309	UPI000742ACD0

Gene Model

Click here to download ENSCVAG00000017355's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017355's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017355	yrdc	85	57.018	ENSG00000196449	YRDC	82	56.710	Homo_sapiens
ENSCVAG00000017355	yrdc	99	75.665	ENSAPOG00000024293	yrdc	99	75.665	Acanthochromis_polyacanthus
ENSCVAG00000017355	yrdc	68	61.202	ENSAMEG00000001173	YRDC	97	61.202	Ailuropoda_melanoleuca
ENSCVAG00000017355	yrdc	99	76.515	ENSACIG00000017330	yrdc	99	76.515	Amphilophus_citrinellus
ENSCVAG00000017355	yrdc	99	75.665	ENSAOCG00000021647	yrdc	99	75.665	Amphiprion_ocellaris
ENSCVAG00000017355	yrdc	99	75.285	ENSAPEG00000006164	yrdc	99	75.285	Amphiprion_percula
ENSCVAG00000017355	yrdc	97	74.517	ENSATEG00000010086	yrdc	97	74.517	Anabas_testudineus
ENSCVAG00000017355	yrdc	72	61.856	ENSACAG00000017203	YRDC	99	58.491	Anolis_carolinensis
ENSCVAG00000017355	yrdc	81	56.621	ENSANAG00000028788	-	93	56.621	Aotus_nancymaae
ENSCVAG00000017355	yrdc	86	53.648	ENSANAG00000031052	-	84	53.648	Aotus_nancymaae
ENSCVAG00000017355	yrdc	95	77.075	ENSACLG00000027775	yrdc	94	77.075	Astatotilapia_calliptera
ENSCVAG00000017355	yrdc	87	72.174	ENSAMXG00000037791	yrdc	88	72.430	Astyanax_mexicanus
ENSCVAG00000017355	yrdc	92	55.061	ENSBTAG00000006510	YRDC	88	55.061	Bos_taurus
ENSCVAG00000017355	yrdc	82	35.023	WBGene00012997	Y48C3A.18	97	36.441	Caenorhabditis_elegans
ENSCVAG00000017355	yrdc	94	53.725	ENSCJAG00000002078	YRDC	70	53.725	Callithrix_jacchus
ENSCVAG00000017355	yrdc	92	54.251	ENSCAFG00000003253	YRDC	87	54.251	Canis_familiaris
ENSCVAG00000017355	yrdc	92	55.061	ENSCAFG00020007843	YRDC	87	55.061	Canis_lupus_dingo
ENSCVAG00000017355	yrdc	86	56.710	ENSCHIG00000007882	YRDC	83	56.710	Capra_hircus
ENSCVAG00000017355	yrdc	63	60.588	ENSTSYG00000005555	YRDC	61	60.588	Carlito_syrichta
ENSCVAG00000017355	yrdc	92	57.430	ENSCPOG00000036144	YRDC	88	57.430	Cavia_porcellus
ENSCVAG00000017355	yrdc	86	56.710	ENSCCAG00000028891	YRDC	82	56.710	Cebus_capucinus
ENSCVAG00000017355	yrdc	85	56.579	ENSCATG00000036928	YRDC	82	56.277	Cercocebus_atys
ENSCVAG00000017355	yrdc	92	55.422	ENSCLAG00000015012	YRDC	88	55.422	Chinchilla_lanigera
ENSCVAG00000017355	yrdc	85	56.579	ENSCSAG00000001116	YRDC	82	56.277	Chlorocebus_sabaeus
ENSCVAG00000017355	yrdc	70	53.226	ENSCHOG00000005500	YRDC	88	53.226	Choloepus_hoffmanni
ENSCVAG00000017355	yrdc	78	65.550	ENSCPBG00000018446	YRDC	89	65.550	Chrysemys_picta_bellii
ENSCVAG00000017355	yrdc	76	50.000	ENSCING00000007564	-	98	50.000	Ciona_intestinalis
ENSCVAG00000017355	yrdc	76	48.571	ENSCSAVG00000009982	-	98	48.571	Ciona_savignyi
ENSCVAG00000017355	yrdc	85	57.018	ENSCANG00000031111	YRDC	82	56.710	Colobus_angolensis_palliatus
ENSCVAG00000017355	yrdc	85	56.579	ENSCGRG00001014496	-	82	56.277	Cricetulus_griseus_chok1gshd
ENSCVAG00000017355	yrdc	85	52.193	ENSCGRG00001000829	-	63	51.948	Cricetulus_griseus_chok1gshd
ENSCVAG00000017355	yrdc	84	74.348	ENSCSEG00000019075	yrdc	85	74.348	Cynoglossus_semilaevis
ENSCVAG00000017355	yrdc	88	71.429	ENSDARG00000041428	yrdc	97	71.429	Danio_rerio
ENSCVAG00000017355	yrdc	94	53.150	ENSDNOG00000038789	-	90	53.648	Dasypus_novemcinctus
ENSCVAG00000017355	yrdc	69	46.995	ENSDNOG00000036198	-	91	46.995	Dasypus_novemcinctus
ENSCVAG00000017355	yrdc	70	62.434	ENSDORG00000008788	Yrdc	84	62.434	Dipodomys_ordii
ENSCVAG00000017355	yrdc	76	46.829	FBgn0061361	CG33786	82	46.829	Drosophila_melanogaster
ENSCVAG00000017355	yrdc	92	41.767	ENSETEG00000003442	YRDC	88	41.767	Echinops_telfairi
ENSCVAG00000017355	yrdc	85	49.778	ENSEBUG00000014080	yrdc	95	49.778	Eptatretus_burgeri
ENSCVAG00000017355	yrdc	92	55.422	ENSEASG00005012253	YRDC	88	55.422	Equus_asinus_asinus
ENSCVAG00000017355	yrdc	92	55.422	ENSECAG00000022522	YRDC	88	55.422	Equus_caballus
ENSCVAG00000017355	yrdc	88	72.152	ENSELUG00000018071	yrdc	78	72.152	Esox_lucius
ENSCVAG00000017355	yrdc	85	56.140	ENSFCAG00000011018	YRDC	88	53.815	Felis_catus
ENSCVAG00000017355	yrdc	70	69.312	ENSFALG00000000964	YRDC	88	68.750	Ficedula_albicollis
ENSCVAG00000017355	yrdc	100	83.895	ENSFHEG00000001029	yrdc	99	84.898	Fundulus_heteroclitus
ENSCVAG00000017355	yrdc	78	79.024	ENSGMOG00000015635	yrdc	99	79.024	Gadus_morhua
ENSCVAG00000017355	yrdc	76	65.686	ENSGALG00000029001	YRDC	80	65.686	Gallus_gallus
ENSCVAG00000017355	yrdc	100	83.146	ENSGAFG00000008396	yrdc	100	83.146	Gambusia_affinis
ENSCVAG00000017355	yrdc	88	74.262	ENSGACG00000013878	yrdc	98	74.262	Gasterosteus_aculeatus
ENSCVAG00000017355	yrdc	81	62.844	ENSGAGG00000014968	YRDC	94	62.844	Gopherus_agassizii
ENSCVAG00000017355	yrdc	85	57.018	ENSGGOG00000007619	YRDC	82	56.710	Gorilla_gorilla
ENSCVAG00000017355	yrdc	95	77.866	ENSHBUG00000009298	yrdc	94	77.866	Haplochromis_burtoni
ENSCVAG00000017355	yrdc	92	55.422	ENSHGLG00000014075	YRDC	88	55.422	Heterocephalus_glaber_female
ENSCVAG00000017355	yrdc	75	61.386	ENSHGLG00100002734	YRDC	73	61.386	Heterocephalus_glaber_male
ENSCVAG00000017355	yrdc	94	65.863	ENSHCOG00000006598	yrdc	94	65.863	Hippocampus_comes
ENSCVAG00000017355	yrdc	89	72.340	ENSIPUG00000014985	yrdc	97	72.340	Ictalurus_punctatus
ENSCVAG00000017355	yrdc	92	55.823	ENSSTOG00000001643	YRDC	88	55.823	Ictidomys_tridecemlineatus
ENSCVAG00000017355	yrdc	97	75.486	ENSKMAG00000013468	yrdc	96	75.486	Kryptolebias_marmoratus
ENSCVAG00000017355	yrdc	99	75.000	ENSLBEG00000027501	yrdc	99	75.000	Labrus_bergylta
ENSCVAG00000017355	yrdc	74	32.212	ENSLACG00000017624	si:ch211-153b23.3	62	32.212	Latimeria_chalumnae
ENSCVAG00000017355	yrdc	98	54.182	ENSLACG00000010689	YRDC	94	64.216	Latimeria_chalumnae
ENSCVAG00000017355	yrdc	88	66.525	ENSLOCG00000003321	yrdc	97	66.525	Lepisosteus_oculatus
ENSCVAG00000017355	yrdc	92	53.815	ENSLAFG00000017556	YRDC	88	53.815	Loxodonta_africana
ENSCVAG00000017355	yrdc	76	59.314	ENSMFAG00000003487	YRDC	96	60.294	Macaca_fascicularis
ENSCVAG00000017355	yrdc	85	55.702	ENSMMUG00000005372	YRDC	61	56.277	Macaca_mulatta
ENSCVAG00000017355	yrdc	85	56.579	ENSMNEG00000029348	YRDC	82	56.277	Macaca_nemestrina
ENSCVAG00000017355	yrdc	53	63.636	ENSMLEG00000041122	YRDC	95	65.035	Mandrillus_leucophaeus
ENSCVAG00000017355	yrdc	97	75.191	ENSMAMG00000007315	yrdc	97	75.191	Mastacembelus_armatus
ENSCVAG00000017355	yrdc	95	77.075	ENSMZEG00005006948	yrdc	94	77.075	Maylandia_zebra
ENSCVAG00000017355	yrdc	73	67.172	ENSMGAG00000002833	YRDC	97	67.172	Meleagris_gallopavo
ENSCVAG00000017355	yrdc	85	56.579	ENSMICG00000031688	YRDC	82	56.277	Microcebus_murinus
ENSCVAG00000017355	yrdc	63	53.939	ENSMOCG00000000164	-	72	51.613	Microtus_ochrogaster
ENSCVAG00000017355	yrdc	99	71.321	ENSMMOG00000002119	yrdc	99	71.321	Mola_mola
ENSCVAG00000017355	yrdc	76	61.463	ENSMODG00000017750	YRDC	73	61.463	Monodelphis_domestica
ENSCVAG00000017355	yrdc	97	73.256	ENSMALG00000012471	yrdc	97	73.256	Monopterus_albus
ENSCVAG00000017355	yrdc	80	56.744	MGP_CAROLIEiJ_G0026453	Yrdc	98	65.049	Mus_caroli
ENSCVAG00000017355	yrdc	86	56.277	ENSMUSG00000028889	Yrdc	100	65.714	Mus_musculus
ENSCVAG00000017355	yrdc	86	57.143	MGP_PahariEiJ_G0028784	Yrdc	100	64.762	Mus_pahari
ENSCVAG00000017355	yrdc	86	56.277	MGP_SPRETEiJ_G0027432	Yrdc	82	56.277	Mus_spretus
ENSCVAG00000017355	yrdc	81	57.604	ENSMPUG00000014542	YRDC	86	57.604	Mustela_putorius_furo
ENSCVAG00000017355	yrdc	76	50.980	ENSMLUG00000028796	-	73	50.980	Myotis_lucifugus
ENSCVAG00000017355	yrdc	86	56.277	ENSMLUG00000000955	-	82	56.277	Myotis_lucifugus
ENSCVAG00000017355	yrdc	71	59.375	ENSMLUG00000024310	-	94	59.375	Myotis_lucifugus
ENSCVAG00000017355	yrdc	76	60.488	ENSNGAG00000019099	Yrdc	73	60.488	Nannospalax_galili
ENSCVAG00000017355	yrdc	94	77.291	ENSNBRG00000009475	yrdc	94	77.291	Neolamprologus_brichardi
ENSCVAG00000017355	yrdc	85	57.018	ENSNLEG00000011665	YRDC	82	56.710	Nomascus_leucogenys
ENSCVAG00000017355	yrdc	76	62.439	ENSMEUG00000005068	YRDC	95	62.439	Notamacropus_eugenii
ENSCVAG00000017355	yrdc	92	54.618	ENSODEG00000007401	YRDC	100	64.762	Octodon_degus
ENSCVAG00000017355	yrdc	90	81.513	ENSONIG00000016213	yrdc	100	81.513	Oreochromis_niloticus
ENSCVAG00000017355	yrdc	87	57.082	ENSOCUG00000005384	YRDC	86	54.724	Oryctolagus_cuniculus
ENSCVAG00000017355	yrdc	100	70.037	ENSORLG00000014393	yrdc	99	70.037	Oryzias_latipes
ENSCVAG00000017355	yrdc	97	73.047	ENSORLG00020019663	yrdc	96	73.047	Oryzias_latipes_hni
ENSCVAG00000017355	yrdc	97	72.656	ENSORLG00015004625	yrdc	96	72.656	Oryzias_latipes_hsok
ENSCVAG00000017355	yrdc	97	72.549	ENSOMEG00000018550	yrdc	96	72.549	Oryzias_melastigma
ENSCVAG00000017355	yrdc	86	55.844	ENSOGAG00000030474	YRDC	83	55.844	Otolemur_garnettii
ENSCVAG00000017355	yrdc	86	56.710	ENSOARG00000019873	YRDC	82	56.710	Ovis_aries
ENSCVAG00000017355	yrdc	52	65.957	ENSPPAG00000039722	-	95	65.957	Pan_paniscus
ENSCVAG00000017355	yrdc	85	56.140	ENSPPRG00000007752	YRDC	88	53.815	Panthera_pardus
ENSCVAG00000017355	yrdc	84	44.770	ENSPTIG00000019821	YRDC	96	44.770	Panthera_tigris_altaica
ENSCVAG00000017355	yrdc	85	57.018	ENSPTRG00000000557	YRDC	82	56.710	Pan_troglodytes
ENSCVAG00000017355	yrdc	85	56.579	ENSPANG00000006487	YRDC	62	56.277	Papio_anubis
ENSCVAG00000017355	yrdc	99	62.547	ENSPKIG00000004574	yrdc	97	62.547	Paramormyrops_kingsleyae
ENSCVAG00000017355	yrdc	76	65.366	ENSPSIG00000006483	YRDC	72	65.366	Pelodiscus_sinensis
ENSCVAG00000017355	yrdc	99	70.412	ENSPMGG00000004184	yrdc	94	75.104	Periophthalmus_magnuspinnatus
ENSCVAG00000017355	yrdc	64	59.302	ENSPEMG00000016985	Yrdc	75	59.302	Peromyscus_maniculatus_bairdii
ENSCVAG00000017355	yrdc	65	55.932	ENSPMAG00000002905	yrdc	96	55.932	Petromyzon_marinus
ENSCVAG00000017355	yrdc	92	52.988	ENSPCIG00000025731	YRDC	90	52.988	Phascolarctos_cinereus
ENSCVAG00000017355	yrdc	100	83.146	ENSPFOG00000023097	yrdc	100	83.146	Poecilia_formosa
ENSCVAG00000017355	yrdc	100	82.772	ENSPLAG00000020882	yrdc	100	82.772	Poecilia_latipinna
ENSCVAG00000017355	yrdc	99	83.333	ENSPMEG00000013237	yrdc	99	83.333	Poecilia_mexicana
ENSCVAG00000017355	yrdc	100	83.146	ENSPREG00000005285	yrdc	100	83.146	Poecilia_reticulata
ENSCVAG00000017355	yrdc	82	56.561	ENSPPYG00000001523	-	91	56.561	Pongo_abelii
ENSCVAG00000017355	yrdc	88	56.356	ENSPCAG00000016850	YRDC	84	56.356	Procavia_capensis
ENSCVAG00000017355	yrdc	85	56.579	ENSPCOG00000013214	YRDC	82	56.277	Propithecus_coquereli
ENSCVAG00000017355	yrdc	92	54.618	ENSPVAG00000010147	YRDC	89	54.618	Pteropus_vampyrus
ENSCVAG00000017355	yrdc	95	78.261	ENSPNYG00000013956	yrdc	94	78.261	Pundamilia_nyererei
ENSCVAG00000017355	yrdc	91	69.008	ENSPNAG00000015625	yrdc	99	69.008	Pygocentrus_nattereri
ENSCVAG00000017355	yrdc	84	55.947	ENSRNOG00000025424	Yrdc	82	55.844	Rattus_norvegicus
ENSCVAG00000017355	yrdc	85	57.456	ENSRBIG00000032289	YRDC	82	56.277	Rhinopithecus_bieti
ENSCVAG00000017355	yrdc	83	55.066	ENSRROG00000039370	YRDC	77	55.947	Rhinopithecus_roxellana
ENSCVAG00000017355	yrdc	73	61.421	ENSSBOG00000018937	YRDC	84	61.421	Saimiri_boliviensis_boliviensis
ENSCVAG00000017355	yrdc	53	65.972	ENSSHAG00000013957	-	97	65.972	Sarcophilus_harrisii
ENSCVAG00000017355	yrdc	80	70.561	ENSSFOG00015006128	yrdc	92	70.561	Scleropages_formosus
ENSCVAG00000017355	yrdc	89	77.966	ENSSMAG00000005195	yrdc	98	75.486	Scophthalmus_maximus
ENSCVAG00000017355	yrdc	53	33.333	ENSSDUG00000006736	-	77	33.333	Seriola_dumerili
ENSCVAG00000017355	yrdc	96	75.781	ENSSDUG00000009775	yrdc	96	75.781	Seriola_dumerili
ENSCVAG00000017355	yrdc	96	76.172	ENSSLDG00000003196	yrdc	96	76.172	Seriola_lalandi_dorsalis
ENSCVAG00000017355	yrdc	76	66.341	ENSSPUG00000003946	YRDC	79	66.341	Sphenodon_punctatus
ENSCVAG00000017355	yrdc	98	75.676	ENSSPAG00000012559	yrdc	98	75.676	Stegastes_partitus
ENSCVAG00000017355	yrdc	92	56.225	ENSSSCG00000040425	YRDC	88	56.225	Sus_scrofa
ENSCVAG00000017355	yrdc	52	71.831	ENSTGUG00000001507	YRDC	97	71.831	Taeniopygia_guttata
ENSCVAG00000017355	yrdc	99	65.556	ENSTRUG00000005923	yrdc	100	65.556	Takifugu_rubripes
ENSCVAG00000017355	yrdc	57	60.390	ENSTBEG00000008863	YRDC	98	60.390	Tupaia_belangeri
ENSCVAG00000017355	yrdc	52	65.248	ENSTTRG00000013538	-	95	65.248	Tursiops_truncatus
ENSCVAG00000017355	yrdc	74	61.809	ENSUAMG00000006150	YRDC	98	61.809	Ursus_americanus
ENSCVAG00000017355	yrdc	86	44.156	ENSVPAG00000006642	YRDC	97	44.156	Vicugna_pacos
ENSCVAG00000017355	yrdc	83	62.946	ENSXETG00000014420	yrdc	94	62.946	Xenopus_tropicalis
ENSCVAG00000017355	yrdc	90	84.874	ENSXCOG00000000829	yrdc	100	84.874	Xiphophorus_couchianus
ENSCVAG00000017355	yrdc	100	82.772	ENSXMAG00000014606	yrdc	95	82.772	Xiphophorus_maculatus