EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000017420 (Gene tree)
Gene ID
107084711
Gene Symbol
zc3h12a
Alias
si:ch211-175f12.1
Full Name
ribonuclease ZC3H12A-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
9312 bases
Position
chrKL652506.1:1899484-1908795
Accession
107084711
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000029557RNase_Zc3h12aPF11977.81.2e-6411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000031232-2767XM_015374661ENSCVAP00000029557619 (aa)XP_015230147UPI000742B53C
Gene Model
Click here to download ENSCVAG00000017420's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017420's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000017420zc3h12a9543.230ENSCVAG00000001516si:dkey-206d17.129143.230
ENSCVAG00000017420zc3h12a9539.123ENSCVAG00000001077-8652.743
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000017420zc3h12a6654.460ENSG00000163874ZC3H12A8266.942Homo_sapiens
ENSCVAG00000017420zc3h12a9530.222ENSAPOG00000018821-9930.076Acanthochromis_polyacanthus
ENSCVAG00000017420zc3h12a9964.826ENSAPOG00000024328zc3h12a9964.826Acanthochromis_polyacanthus
ENSCVAG00000017420zc3h12a6655.452ENSAMEG00000000991ZC3H12A9344.968Ailuropoda_melanoleuca
ENSCVAG00000017420zc3h12a9666.667ENSACIG00000017750zc3h12a9866.830Amphilophus_citrinellus
ENSCVAG00000017420zc3h12a5154.969ENSACIG00000006790-9243.506Amphilophus_citrinellus
ENSCVAG00000017420zc3h12a9944.357ENSACIG00000004135si:dkey-206d17.127963.090Amphilophus_citrinellus
ENSCVAG00000017420zc3h12a9965.773ENSAOCG00000014937zc3h12a9965.773Amphiprion_ocellaris
ENSCVAG00000017420zc3h12a9965.773ENSAPEG00000006072zc3h12a9965.773Amphiprion_percula
ENSCVAG00000017420zc3h12a9962.401ENSATEG00000009946zc3h12a9962.717Anabas_testudineus
ENSCVAG00000017420zc3h12a9644.984ENSATEG00000006140si:dkey-206d17.128553.165Anabas_testudineus
ENSCVAG00000017420zc3h12a9545.380ENSACAG00000017285ZC3H12A9246.341Anolis_carolinensis
ENSCVAG00000017420zc3h12a6655.660ENSANAG00000009908ZC3H12A8266.529Aotus_nancymaae
ENSCVAG00000017420zc3h12a5161.585ENSACLG00000004488si:dkey-206d17.129243.492Astatotilapia_calliptera
ENSCVAG00000017420zc3h12a9963.133ENSACLG00000027801zc3h12a9963.133Astatotilapia_calliptera
ENSCVAG00000017420zc3h12a9648.270ENSAMXG00000001736zc3h12a9948.270Astyanax_mexicanus
ENSCVAG00000017420zc3h12a9744.246ENSBTAG00000011316ZC3H12A9544.733Bos_taurus
ENSCVAG00000017420zc3h12a6656.132ENSCJAG00000041792ZC3H12A9345.469Callithrix_jacchus
ENSCVAG00000017420zc3h12a9645.172ENSCAFG00000003304ZC3H12A9445.588Canis_familiaris
ENSCVAG00000017420zc3h12a9645.172ENSCAFG00020008620ZC3H12A9445.588Canis_lupus_dingo
ENSCVAG00000017420zc3h12a9743.619ENSCHIG00000021957ZC3H12A9544.231Capra_hircus
ENSCVAG00000017420zc3h12a9644.901ENSTSYG00000035959ZC3H12A9245.230Carlito_syrichta
ENSCVAG00000017420zc3h12a9546.066ENSCAPG00000015365ZC3H12A9946.393Cavia_aperea
ENSCVAG00000017420zc3h12a9645.950ENSCPOG00000011081ZC3H12A9946.434Cavia_porcellus
ENSCVAG00000017420zc3h12a6655.687ENSCCAG00000023848ZC3H12A9345.130Cebus_capucinus
ENSCVAG00000017420zc3h12a6655.288ENSCATG00000037700ZC3H12A8166.529Cercocebus_atys
ENSCVAG00000017420zc3h12a8268.065ENSCLAG00000008722ZC3H12A9246.353Chinchilla_lanigera
ENSCVAG00000017420zc3h12a6555.742ENSCSAG00000001106ZC3H12A9145.499Chlorocebus_sabaeus
ENSCVAG00000017420zc3h12a9646.900ENSCPBG00000018492ZC3H12A9146.900Chrysemys_picta_bellii
ENSCVAG00000017420zc3h12a6654.846ENSCANG00000042287ZC3H12A8166.529Colobus_angolensis_palliatus
ENSCVAG00000017420zc3h12a9645.234ENSCGRG00001015497Zc3h12a9345.234Cricetulus_griseus_chok1gshd
ENSCVAG00000017420zc3h12a9645.234ENSCGRG00000013149Zc3h12a9345.234Cricetulus_griseus_crigri
ENSCVAG00000017420zc3h12a5157.704ENSCSEG00000010073-8257.317Cynoglossus_semilaevis
ENSCVAG00000017420zc3h12a9855.806ENSCSEG00000019043zc3h12a9655.968Cynoglossus_semilaevis
ENSCVAG00000017420zc3h12a9643.018ENSCSEG00000010348si:dkey-206d17.129043.018Cynoglossus_semilaevis
ENSCVAG00000017420zc3h12a9546.935ENSDARG00000101034si:dkey-206d17.129046.603Danio_rerio
ENSCVAG00000017420zc3h12a6554.333ENSDNOG00000035006ZC3H12A9344.640Dasypus_novemcinctus
ENSCVAG00000017420zc3h12a5165.409ENSDORG00000012666Zc3h12a9244.681Dipodomys_ordii
ENSCVAG00000017420zc3h12a5054.088ENSETEG00000018311ZC3H12A8246.698Echinops_telfairi
ENSCVAG00000017420zc3h12a6554.460ENSEASG00005012220ZC3H12A9544.391Equus_asinus_asinus
ENSCVAG00000017420zc3h12a6653.704ENSECAG00000009562ZC3H12A9044.391Equus_caballus
ENSCVAG00000017420zc3h12a9950.683ENSELUG00000018274zc3h12a9950.683Esox_lucius
ENSCVAG00000017420zc3h12a9644.514ENSELUG00000007368si:dkey-206d17.129444.514Esox_lucius
ENSCVAG00000017420zc3h12a6655.450ENSFCAG00000008757ZC3H12A9245.289Felis_catus
ENSCVAG00000017420zc3h12a9648.392ENSFALG00000000890ZC3H12A9848.232Ficedula_albicollis
ENSCVAG00000017420zc3h12a6655.504ENSFDAG00000006446ZC3H12A9245.499Fukomys_damarensis
ENSCVAG00000017420zc3h12a9543.350ENSFHEG00000001174si:dkey-206d17.129343.350Fundulus_heteroclitus
ENSCVAG00000017420zc3h12a9975.563ENSFHEG00000001019zc3h12a9975.723Fundulus_heteroclitus
ENSCVAG00000017420zc3h12a9647.764ENSGMOG00000007388-9948.631Gadus_morhua
ENSCVAG00000017420zc3h12a9648.025ENSGALG00000002021ZC3H12A8848.025Gallus_gallus
ENSCVAG00000017420zc3h12a9542.975ENSGAFG00000019001si:dkey-206d17.129342.975Gambusia_affinis
ENSCVAG00000017420zc3h12a9974.560ENSGAFG00000008480zc3h12a9975.840Gambusia_affinis
ENSCVAG00000017420zc3h12a9739.379ENSGAFG00000009523-9939.478Gambusia_affinis
ENSCVAG00000017420zc3h12a9759.143ENSGACG00000013859zc3h12a9859.143Gasterosteus_aculeatus
ENSCVAG00000017420zc3h12a9544.426ENSGACG00000002341si:dkey-206d17.129744.426Gasterosteus_aculeatus
ENSCVAG00000017420zc3h12a9845.455ENSGAGG00000003881ZC3H12A9245.455Gopherus_agassizii
ENSCVAG00000017420zc3h12a6655.164ENSGGOG00000009268ZC3H12A9345.338Gorilla_gorilla
ENSCVAG00000017420zc3h12a9963.291ENSHBUG00000009356zc3h12a9963.291Haplochromis_burtoni
ENSCVAG00000017420zc3h12a5161.585ENSHBUG00000017076si:dkey-206d17.129243.538Haplochromis_burtoni
ENSCVAG00000017420zc3h12a9645.366ENSHGLG00000012808ZC3H12A9245.559Heterocephalus_glaber_female
ENSCVAG00000017420zc3h12a6654.695ENSHGLG00100002244ZC3H12A9245.066Heterocephalus_glaber_male
ENSCVAG00000017420zc3h12a6552.555ENSHCOG00000004255si:dkey-206d17.129258.921Hippocampus_comes
ENSCVAG00000017420zc3h12a9639.434ENSIPUG00000011663-9939.434Ictalurus_punctatus
ENSCVAG00000017420zc3h12a9944.081ENSIPUG00000005852si:dkey-206d17.129144.081Ictalurus_punctatus
ENSCVAG00000017420zc3h12a5067.296ENSIPUG00000015158Zc3h12a9848.065Ictalurus_punctatus
ENSCVAG00000017420zc3h12a6655.294ENSSTOG00000026842ZC3H12A9344.968Ictidomys_tridecemlineatus
ENSCVAG00000017420zc3h12a9744.901ENSJJAG00000004252Zc3h12a9345.066Jaculus_jaculus
ENSCVAG00000017420zc3h12a9767.484ENSKMAG00000013650zc3h12a9867.484Kryptolebias_marmoratus
ENSCVAG00000017420zc3h12a9437.943ENSLBEG00000012121-9737.943Labrus_bergylta
ENSCVAG00000017420zc3h12a9642.147ENSLBEG00000017593si:dkey-206d17.129742.147Labrus_bergylta
ENSCVAG00000017420zc3h12a9964.127ENSLBEG00000027429zc3h12a9964.127Labrus_bergylta
ENSCVAG00000017420zc3h12a9645.677ENSLACG00000017365ZC3H12A9445.677Latimeria_chalumnae
ENSCVAG00000017420zc3h12a9748.095ENSLOCG00000003232si:dkey-206d17.129348.095Lepisosteus_oculatus
ENSCVAG00000017420zc3h12a6653.991ENSLAFG00000018720ZC3H12A9343.811Loxodonta_africana
ENSCVAG00000017420zc3h12a6654.846ENSMFAG00000032647ZC3H12A8166.529Macaca_fascicularis
ENSCVAG00000017420zc3h12a6654.846ENSMMUG00000010323ZC3H12A9245.057Macaca_mulatta
ENSCVAG00000017420zc3h12a6555.854ENSMNEG00000040453ZC3H12A7967.797Macaca_nemestrina
ENSCVAG00000017420zc3h12a6654.846ENSMLEG00000034570ZC3H12A8166.529Mandrillus_leucophaeus
ENSCVAG00000017420zc3h12a9963.622ENSMAMG00000007494zc3h12a9963.622Mastacembelus_armatus
ENSCVAG00000017420zc3h12a9644.025ENSMAMG00000004483si:dkey-206d17.129044.025Mastacembelus_armatus
ENSCVAG00000017420zc3h12a5161.585ENSMZEG00005026287si:dkey-206d17.129243.492Maylandia_zebra
ENSCVAG00000017420zc3h12a9963.133ENSMZEG00005006997zc3h12a9963.133Maylandia_zebra
ENSCVAG00000017420zc3h12a9647.742ENSMGAG00000003371ZC3H12A9747.742Meleagris_gallopavo
ENSCVAG00000017420zc3h12a9645.738ENSMAUG00000012893Zc3h12a9345.738Mesocricetus_auratus
ENSCVAG00000017420zc3h12a6654.907ENSMICG00000004790ZC3H12A9344.968Microcebus_murinus
ENSCVAG00000017420zc3h12a9645.634ENSMOCG00000001899Zc3h12a9345.634Microtus_ochrogaster
ENSCVAG00000017420zc3h12a9841.946ENSMMOG00000013604si:dkey-206d17.129942.584Mola_mola
ENSCVAG00000017420zc3h12a9761.974ENSMMOG00000000727zc3h12a9861.974Mola_mola
ENSCVAG00000017420zc3h12a9645.714ENSMODG00000017794ZC3H12A9245.873Monodelphis_domestica
ENSCVAG00000017420zc3h12a9962.420ENSMALG00000012319zc3h12a9962.420Monopterus_albus
ENSCVAG00000017420zc3h12a9542.496ENSMALG00000012794si:dkey-206d17.129642.344Monopterus_albus
ENSCVAG00000017420zc3h12a6755.582MGP_CAROLIEiJ_G0026462Zc3h12a9345.559Mus_caroli
ENSCVAG00000017420zc3h12a6755.582ENSMUSG00000042677Zc3h12a9345.559Mus_musculus
ENSCVAG00000017420zc3h12a6655.663MGP_PahariEiJ_G0028793Zc3h12a9345.017Mus_pahari
ENSCVAG00000017420zc3h12a9745.395MGP_SPRETEiJ_G0027441Zc3h12a8665.833Mus_spretus
ENSCVAG00000017420zc3h12a6654.608ENSMPUG00000014758ZC3H12A9644.984Mustela_putorius_furo
ENSCVAG00000017420zc3h12a9944.550ENSMLUG00000027279ZC3H12A9544.866Myotis_lucifugus
ENSCVAG00000017420zc3h12a9744.975ENSNGAG00000018725Zc3h12a9445.098Nannospalax_galili
ENSCVAG00000017420zc3h12a9962.816ENSNBRG00000009607zc3h12a9962.816Neolamprologus_brichardi
ENSCVAG00000017420zc3h12a5061.830ENSNBRG00000014376si:dkey-206d17.129844.750Neolamprologus_brichardi
ENSCVAG00000017420zc3h12a6651.932ENSNLEG00000011545ZC3H12A9242.484Nomascus_leucogenys
ENSCVAG00000017420zc3h12a9434.660ENSMEUG00000003389ZC3H12A9934.660Notamacropus_eugenii
ENSCVAG00000017420zc3h12a9645.098ENSODEG00000005643ZC3H12A9245.140Octodon_degus
ENSCVAG00000017420zc3h12a9959.807ENSONIG00000016235zc3h12a9959.807Oreochromis_niloticus
ENSCVAG00000017420zc3h12a5061.635ENSONIG00000013685si:dkey-206d17.129844.390Oreochromis_niloticus
ENSCVAG00000017420zc3h12a9645.588ENSOANG00000002060ZC3H12A8945.588Ornithorhynchus_anatinus
ENSCVAG00000017420zc3h12a5363.501ENSOCUG00000010856ZC3H12A8463.501Oryctolagus_cuniculus
ENSCVAG00000017420zc3h12a9961.935ENSORLG00000014448zc3h12a9862.258Oryzias_latipes
ENSCVAG00000017420zc3h12a9638.537ENSORLG00000015280-9839.123Oryzias_latipes
ENSCVAG00000017420zc3h12a5154.114ENSORLG00020008580-8638.339Oryzias_latipes_hni
ENSCVAG00000017420zc3h12a9960.645ENSORLG00020019555zc3h12a9860.968Oryzias_latipes_hni
ENSCVAG00000017420zc3h12a9542.414ENSORLG00020016107-9842.950Oryzias_latipes_hni
ENSCVAG00000017420zc3h12a5153.750ENSORLG00015003680-8638.019Oryzias_latipes_hsok
ENSCVAG00000017420zc3h12a9960.968ENSORLG00015004539zc3h12a9160.968Oryzias_latipes_hsok
ENSCVAG00000017420zc3h12a9542.276ENSORLG00015007634ZC3H12A9842.788Oryzias_latipes_hsok
ENSCVAG00000017420zc3h12a9961.129ENSOMEG00000000483zc3h12a9661.129Oryzias_melastigma
ENSCVAG00000017420zc3h12a9543.831ENSOMEG00000005602si:dkey-206d17.129743.831Oryzias_melastigma
ENSCVAG00000017420zc3h12a9743.669ENSOGAG00000030940ZC3H12A9343.994Otolemur_garnettii
ENSCVAG00000017420zc3h12a5164.000ENSOARG00000019760ZC3H12A7364.220Ovis_aries
ENSCVAG00000017420zc3h12a6654.460ENSPPAG00000041054ZC3H12A8266.529Pan_paniscus
ENSCVAG00000017420zc3h12a6755.634ENSPPRG00000014359ZC3H12A9345.484Panthera_pardus
ENSCVAG00000017420zc3h12a6655.140ENSPTIG00000012943ZC3H12A8664.143Panthera_tigris_altaica
ENSCVAG00000017420zc3h12a6654.460ENSPTRG00000000544ZC3H12A8266.529Pan_troglodytes
ENSCVAG00000017420zc3h12a6654.846ENSPANG00000011821ZC3H12A8166.529Papio_anubis
ENSCVAG00000017420zc3h12a9648.653ENSPKIG00000004769zc3h12a9348.653Paramormyrops_kingsleyae
ENSCVAG00000017420zc3h12a9646.688ENSPSIG00000009198ZC3H12A9946.688Pelodiscus_sinensis
ENSCVAG00000017420zc3h12a9952.480ENSPMGG00000004114zc3h12a9953.707Periophthalmus_magnuspinnatus
ENSCVAG00000017420zc3h12a8040.909ENSPMGG00000015418-9340.909Periophthalmus_magnuspinnatus
ENSCVAG00000017420zc3h12a9645.470ENSPEMG00000024080Zc3h12a9345.470Peromyscus_maniculatus_bairdii
ENSCVAG00000017420zc3h12a9975.917ENSPFOG00000013935zc3h12a9976.396Poecilia_formosa
ENSCVAG00000017420zc3h12a7239.394ENSPFOG00000002933si:dkey-206d17.129939.394Poecilia_formosa
ENSCVAG00000017420zc3h12a7239.610ENSPLAG00000016243si:dkey-206d17.129039.610Poecilia_latipinna
ENSCVAG00000017420zc3h12a9976.077ENSPLAG00000020965zc3h12a9976.555Poecilia_latipinna
ENSCVAG00000017420zc3h12a9975.758ENSPMEG00000013674zc3h12a9976.236Poecilia_mexicana
ENSCVAG00000017420zc3h12a9542.739ENSPMEG00000011188si:dkey-206d17.129342.739Poecilia_mexicana
ENSCVAG00000017420zc3h12a9976.837ENSPREG00000005453zc3h12a9976.837Poecilia_reticulata
ENSCVAG00000017420zc3h12a9539.414ENSPREG00000020369-9439.539Poecilia_reticulata
ENSCVAG00000017420zc3h12a6655.556ENSPPYG00000001534ZC3H12A9345.338Pongo_abelii
ENSCVAG00000017420zc3h12a6754.861ENSPCOG00000015837ZC3H12A9344.677Propithecus_coquereli
ENSCVAG00000017420zc3h12a6557.516ENSPVAG00000010120ZC3H12A7444.939Pteropus_vampyrus
ENSCVAG00000017420zc3h12a9963.291ENSPNYG00000013534zc3h12a9963.291Pundamilia_nyererei
ENSCVAG00000017420zc3h12a5161.585ENSPNYG00000003297si:dkey-206d17.129243.701Pundamilia_nyererei
ENSCVAG00000017420zc3h12a9946.739ENSPNAG00000010952si:dkey-206d17.129146.739Pygocentrus_nattereri
ENSCVAG00000017420zc3h12a9646.870ENSPNAG00000015494zc3h12a9846.870Pygocentrus_nattereri
ENSCVAG00000017420zc3h12a6755.529ENSRNOG00000009131Zc3h12a9345.098Rattus_norvegicus
ENSCVAG00000017420zc3h12a5166.038ENSRBIG00000042237ZC3H12A9244.643Rhinopithecus_bieti
ENSCVAG00000017420zc3h12a7052.982ENSRROG00000037444ZC3H12A8166.529Rhinopithecus_roxellana
ENSCVAG00000017420zc3h12a7053.812ENSSBOG00000028357ZC3H12A9345.292Saimiri_boliviensis_boliviensis
ENSCVAG00000017420zc3h12a7945.736ENSSHAG00000011780-9946.124Sarcophilus_harrisii
ENSCVAG00000017420zc3h12a8448.370ENSSFOG00015005925zc3h12a9948.370Scleropages_formosus
ENSCVAG00000017420zc3h12a9963.074ENSSMAG00000005140zc3h12a9963.233Scophthalmus_maximus
ENSCVAG00000017420zc3h12a9544.006ENSSMAG00000001367si:dkey-206d17.128944.006Scophthalmus_maximus
ENSCVAG00000017420zc3h12a9963.665ENSSDUG00000009879zc3h12a9963.665Seriola_dumerili
ENSCVAG00000017420zc3h12a9740.032ENSSDUG00000010581-8753.586Seriola_dumerili
ENSCVAG00000017420zc3h12a9544.076ENSSDUG00000007162si:dkey-206d17.129044.076Seriola_dumerili
ENSCVAG00000017420zc3h12a9963.608ENSSLDG00000003826zc3h12a9963.608Seriola_lalandi_dorsalis
ENSCVAG00000017420zc3h12a9740.032ENSSLDG00000022022-9440.032Seriola_lalandi_dorsalis
ENSCVAG00000017420zc3h12a9645.679ENSSPUG00000003668ZC3H12A8745.679Sphenodon_punctatus
ENSCVAG00000017420zc3h12a9545.950ENSSPAG00000020938si:dkey-206d17.129546.129Stegastes_partitus
ENSCVAG00000017420zc3h12a9965.446ENSSPAG00000012466zc3h12a10065.446Stegastes_partitus
ENSCVAG00000017420zc3h12a9744.300ENSSSCG00000037815ZC3H12A9545.098Sus_scrofa
ENSCVAG00000017420zc3h12a8348.190ENSTGUG00000001563ZC3H12A9948.190Taeniopygia_guttata
ENSCVAG00000017420zc3h12a9544.084ENSTRUG00000010565si:dkey-206d17.129744.084Takifugu_rubripes
ENSCVAG00000017420zc3h12a5461.794ENSTNIG00000001274si:dkey-206d17.129941.205Tetraodon_nigroviridis
ENSCVAG00000017420zc3h12a6753.547ENSTTRG00000008591ZC3H12A9344.872Tursiops_truncatus
ENSCVAG00000017420zc3h12a6654.713ENSUAMG00000014105ZC3H12A9244.498Ursus_americanus
ENSCVAG00000017420zc3h12a6654.483ENSUMAG00000001122ZC3H12A9544.194Ursus_maritimus
ENSCVAG00000017420zc3h12a6556.265ENSVVUG00000023171ZC3H12A9445.663Vulpes_vulpes
ENSCVAG00000017420zc3h12a9545.910ENSXETG00000011465zc3h12a9945.910Xenopus_tropicalis
ENSCVAG00000017420zc3h12a9966.828ENSXCOG00000008984zc3h12a9973.494Xiphophorus_couchianus
ENSCVAG00000017420zc3h12a9538.270ENSXMAG00000005023-9838.935Xiphophorus_maculatus
ENSCVAG00000017420zc3h12a9542.454ENSXMAG00000025043si:dkey-206d17.129342.454Xiphophorus_maculatus
ENSCVAG00000017420zc3h12a9976.480ENSXMAG00000014646zc3h12a9977.760Xiphophorus_maculatus
ENSCVAG00000017420zc3h12a5159.434ENSXMAG00000014715-8460.000Xiphophorus_maculatus

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