EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017463 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 14778 bases
Position: chrKL652702.1:1104601-1119378
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014757	RRM_1	PF00076.22	6.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031234	-	636	-	ENSCVAP00000014757	211 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000017463's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017463's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017463	-	89	47.907	ENSCVAG00000017075	msi2a	75	52.000
ENSCVAG00000017463	-	89	75.115	ENSCVAG00000009100	MSI1	85	68.664

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017463	-	89	68.398	ENSG00000135097	MSI1	64	68.398	Homo_sapiens
ENSCVAG00000017463	-	89	81.019	ENSAPOG00000003191	MSI1	76	81.019	Acanthochromis_polyacanthus
ENSCVAG00000017463	-	89	73.853	ENSAPOG00000023458	-	62	73.853	Acanthochromis_polyacanthus
ENSCVAG00000017463	-	89	90.769	ENSAMEG00000013302	MSI1	56	90.769	Ailuropoda_melanoleuca
ENSCVAG00000017463	-	89	75.342	ENSACIG00000017754	-	74	75.342	Amphilophus_citrinellus
ENSCVAG00000017463	-	89	60.185	ENSAOCG00000009031	-	61	60.185	Amphiprion_ocellaris
ENSCVAG00000017463	-	89	81.019	ENSAOCG00000003804	MSI1	76	81.019	Amphiprion_ocellaris
ENSCVAG00000017463	-	89	81.019	ENSAPEG00000003245	MSI1	76	81.019	Amphiprion_percula
ENSCVAG00000017463	-	89	73.853	ENSAPEG00000006857	-	53	73.853	Amphiprion_percula
ENSCVAG00000017463	-	89	72.603	ENSATEG00000023779	-	76	72.603	Anabas_testudineus
ENSCVAG00000017463	-	89	74.312	ENSATEG00000017059	MSI1	89	74.884	Anabas_testudineus
ENSCVAG00000017463	-	89	66.812	ENSACAG00000002762	MSI1	63	68.122	Anolis_carolinensis
ENSCVAG00000017463	-	89	68.398	ENSANAG00000027151	MSI1	65	68.398	Aotus_nancymaae
ENSCVAG00000017463	-	89	74.654	ENSACLG00000000117	-	66	74.654	Astatotilapia_calliptera
ENSCVAG00000017463	-	89	79.358	ENSACLG00000011230	MSI1	76	79.358	Astatotilapia_calliptera
ENSCVAG00000017463	-	89	72.018	ENSAMXG00000038960	msi1	63	72.018	Astyanax_mexicanus
ENSCVAG00000017463	-	89	68.398	ENSBTAG00000009800	MSI1	68	68.398	Bos_taurus
ENSCVAG00000017463	-	89	68.398	ENSCJAG00000008578	MSI1	64	68.398	Callithrix_jacchus
ENSCVAG00000017463	-	89	68.398	ENSCAFG00000010283	MSI1	64	68.398	Canis_familiaris
ENSCVAG00000017463	-	89	68.398	ENSCAFG00020020585	MSI1	74	68.398	Canis_lupus_dingo
ENSCVAG00000017463	-	89	66.525	ENSCHIG00000024304	MSI1	64	66.525	Capra_hircus
ENSCVAG00000017463	-	93	68.050	ENSTSYG00000033949	MSI1	81	65.098	Carlito_syrichta
ENSCVAG00000017463	-	89	68.398	ENSCAPG00000003919	MSI1	66	68.398	Cavia_aperea
ENSCVAG00000017463	-	89	68.398	ENSCPOG00000012361	MSI1	68	68.398	Cavia_porcellus
ENSCVAG00000017463	-	89	68.398	ENSCCAG00000035567	MSI1	64	68.398	Cebus_capucinus
ENSCVAG00000017463	-	89	68.398	ENSCATG00000030019	MSI1	64	68.398	Cercocebus_atys
ENSCVAG00000017463	-	89	68.398	ENSCLAG00000011329	MSI1	68	68.398	Chinchilla_lanigera
ENSCVAG00000017463	-	53	57.534	ENSCSAG00000002265	MSI1	50	57.534	Chlorocebus_sabaeus
ENSCVAG00000017463	-	89	71.364	ENSCPBG00000011349	MSI1	63	71.364	Chrysemys_picta_bellii
ENSCVAG00000017463	-	89	68.398	ENSCANG00000040651	MSI1	70	68.398	Colobus_angolensis_palliatus
ENSCVAG00000017463	-	89	68.398	ENSCGRG00001018883	Msi1	64	68.398	Cricetulus_griseus_chok1gshd
ENSCVAG00000017463	-	89	68.398	ENSCGRG00000002191	Msi1	51	68.398	Cricetulus_griseus_crigri
ENSCVAG00000017463	-	88	65.421	ENSCSEG00000011032	MSI1	66	65.421	Cynoglossus_semilaevis
ENSCVAG00000017463	-	95	77.922	ENSCSEG00000005834	-	98	77.922	Cynoglossus_semilaevis
ENSCVAG00000017463	-	89	72.811	ENSCSEG00000008352	-	62	72.811	Cynoglossus_semilaevis
ENSCVAG00000017463	-	88	74.884	ENSDARG00000102015	CABZ01037298.1	89	74.884	Danio_rerio
ENSCVAG00000017463	-	89	65.596	ENSDARG00000010710	msi1	80	70.930	Danio_rerio
ENSCVAG00000017463	-	89	62.844	ENSDNOG00000005713	MSI1	63	62.844	Dasypus_novemcinctus
ENSCVAG00000017463	-	89	68.398	ENSDORG00000005610	Msi1	66	68.398	Dipodomys_ordii
ENSCVAG00000017463	-	89	64.502	ENSETEG00000004756	MSI1	70	64.502	Echinops_telfairi
ENSCVAG00000017463	-	89	68.398	ENSEASG00005004736	MSI1	64	68.398	Equus_asinus_asinus
ENSCVAG00000017463	-	89	68.398	ENSECAG00000017526	MSI1	64	68.398	Equus_caballus
ENSCVAG00000017463	-	89	65.278	ENSELUG00000023280	-	66	65.278	Esox_lucius
ENSCVAG00000017463	-	89	65.966	ENSELUG00000023219	MSI1	63	66.387	Esox_lucius
ENSCVAG00000017463	-	89	68.398	ENSFCAG00000011007	MSI1	64	68.398	Felis_catus
ENSCVAG00000017463	-	89	70.909	ENSFALG00000007574	MSI1	73	70.909	Ficedula_albicollis
ENSCVAG00000017463	-	89	68.398	ENSFDAG00000019586	MSI1	70	68.398	Fukomys_damarensis
ENSCVAG00000017463	-	89	74.771	ENSFHEG00000022446	MSI1	77	66.972	Fundulus_heteroclitus
ENSCVAG00000017463	-	89	80.645	ENSFHEG00000003560	-	76	80.645	Fundulus_heteroclitus
ENSCVAG00000017463	-	89	75.566	ENSGMOG00000017838	-	63	75.566	Gadus_morhua
ENSCVAG00000017463	-	89	73.611	ENSGMOG00000001006	MSI1	62	73.148	Gadus_morhua
ENSCVAG00000017463	-	89	70.909	ENSGALG00000007227	MSI1	56	70.909	Gallus_gallus
ENSCVAG00000017463	-	87	74.809	ENSGAFG00000005860	-	51	74.809	Gambusia_affinis
ENSCVAG00000017463	-	89	80.556	ENSGAFG00000021522	MSI1	76	80.556	Gambusia_affinis
ENSCVAG00000017463	-	89	72.018	ENSGACG00000012679	MSI1	62	72.018	Gasterosteus_aculeatus
ENSCVAG00000017463	-	89	74.783	ENSGACG00000008674	-	64	74.783	Gasterosteus_aculeatus
ENSCVAG00000017463	-	89	71.364	ENSGAGG00000016037	MSI1	63	71.364	Gopherus_agassizii
ENSCVAG00000017463	-	89	68.398	ENSGGOG00000010328	MSI1	74	68.398	Gorilla_gorilla
ENSCVAG00000017463	-	89	79.358	ENSHBUG00000021921	MSI1	76	79.358	Haplochromis_burtoni
ENSCVAG00000017463	-	89	74.654	ENSHBUG00000011841	-	62	74.654	Haplochromis_burtoni
ENSCVAG00000017463	-	89	68.398	ENSHGLG00000012782	MSI1	64	68.398	Heterocephalus_glaber_female
ENSCVAG00000017463	-	89	68.398	ENSHGLG00100016848	MSI1	70	68.398	Heterocephalus_glaber_male
ENSCVAG00000017463	-	89	74.194	ENSHCOG00000012067	-	62	74.194	Hippocampus_comes
ENSCVAG00000017463	-	89	70.370	ENSHCOG00000012019	MSI1	76	77.340	Hippocampus_comes
ENSCVAG00000017463	-	89	71.560	ENSIPUG00000001976	msi1	77	71.560	Ictalurus_punctatus
ENSCVAG00000017463	-	89	68.398	ENSSTOG00000009799	MSI1	74	68.398	Ictidomys_tridecemlineatus
ENSCVAG00000017463	-	89	51.965	ENSJJAG00000010643	-	60	51.101	Jaculus_jaculus
ENSCVAG00000017463	-	89	68.398	ENSJJAG00000010463	Msi1	64	68.398	Jaculus_jaculus
ENSCVAG00000017463	-	89	75.000	ENSKMAG00000011251	MSI1	62	75.000	Kryptolebias_marmoratus
ENSCVAG00000017463	-	89	73.148	ENSKMAG00000019877	-	80	73.148	Kryptolebias_marmoratus
ENSCVAG00000017463	-	89	74.771	ENSLBEG00000008789	MSI1	62	74.771	Labrus_bergylta
ENSCVAG00000017463	-	89	80.645	ENSLBEG00000001375	-	76	80.645	Labrus_bergylta
ENSCVAG00000017463	-	89	63.090	ENSLACG00000018287	MSI1	67	63.090	Latimeria_chalumnae
ENSCVAG00000017463	-	88	68.261	ENSLAFG00000009412	MSI1	70	68.261	Loxodonta_africana
ENSCVAG00000017463	-	89	68.398	ENSMFAG00000001798	MSI1	68	68.398	Macaca_fascicularis
ENSCVAG00000017463	-	89	68.398	ENSMMUG00000031527	MSI1	64	68.398	Macaca_mulatta
ENSCVAG00000017463	-	89	68.398	ENSMNEG00000040034	MSI1	64	68.398	Macaca_nemestrina
ENSCVAG00000017463	-	89	68.398	ENSMLEG00000003921	MSI1	70	68.398	Mandrillus_leucophaeus
ENSCVAG00000017463	-	89	74.537	ENSMAMG00000002279	MSI1	62	74.537	Mastacembelus_armatus
ENSCVAG00000017463	-	89	80.556	ENSMAMG00000018426	-	76	80.556	Mastacembelus_armatus
ENSCVAG00000017463	-	89	79.358	ENSMZEG00005026892	MSI1	76	79.358	Maylandia_zebra
ENSCVAG00000017463	-	89	74.654	ENSMZEG00005000340	-	62	74.654	Maylandia_zebra
ENSCVAG00000017463	-	89	68.398	ENSMICG00000033181	MSI1	64	68.398	Microcebus_murinus
ENSCVAG00000017463	-	89	68.398	ENSMOCG00000002286	Msi1	64	68.398	Microtus_ochrogaster
ENSCVAG00000017463	-	89	72.222	ENSMMOG00000012265	-	80	72.222	Mola_mola
ENSCVAG00000017463	-	89	56.944	ENSMMOG00000010492	MSI1	58	56.944	Mola_mola
ENSCVAG00000017463	-	89	79.167	ENSMALG00000001426	-	81	79.167	Monopterus_albus
ENSCVAG00000017463	-	89	74.654	ENSMALG00000017889	MSI1	62	74.654	Monopterus_albus
ENSCVAG00000017463	-	89	67.965	MGP_CAROLIEiJ_G0027626	Msi1	86	57.219	Mus_caroli
ENSCVAG00000017463	-	89	71.364	ENSMUSG00000054256	Msi1	86	57.219	Mus_musculus
ENSCVAG00000017463	-	89	71.689	MGP_PahariEiJ_G0024206	Msi1	86	57.527	Mus_pahari
ENSCVAG00000017463	-	89	67.965	MGP_SPRETEiJ_G0028624	Msi1	86	57.219	Mus_spretus
ENSCVAG00000017463	-	89	68.398	ENSMPUG00000003168	MSI1	74	68.398	Mustela_putorius_furo
ENSCVAG00000017463	-	80	60.181	ENSMLUG00000010313	MSI1	71	56.485	Myotis_lucifugus
ENSCVAG00000017463	-	89	68.398	ENSNGAG00000014508	Msi1	64	68.398	Nannospalax_galili
ENSCVAG00000017463	-	97	78.059	ENSNBRG00000018012	MSI1	97	78.059	Neolamprologus_brichardi
ENSCVAG00000017463	-	89	74.654	ENSNBRG00000000841	-	62	74.654	Neolamprologus_brichardi
ENSCVAG00000017463	-	89	61.765	ENSNLEG00000015636	MSI1	67	61.765	Nomascus_leucogenys
ENSCVAG00000017463	-	89	65.801	ENSMEUG00000015759	MSI1	70	65.801	Notamacropus_eugenii
ENSCVAG00000017463	-	82	62.564	ENSOPRG00000016879	MSI1	67	62.564	Ochotona_princeps
ENSCVAG00000017463	-	89	68.398	ENSODEG00000006328	MSI1	70	68.398	Octodon_degus
ENSCVAG00000017463	-	89	83.824	ENSONIG00000011182	MSI1	62	74.654	Oreochromis_niloticus
ENSCVAG00000017463	-	89	74.892	ENSONIG00000019452	-	77	74.892	Oreochromis_niloticus
ENSCVAG00000017463	-	89	68.398	ENSOCUG00000027716	MSI1	74	68.398	Oryctolagus_cuniculus
ENSCVAG00000017463	-	89	80.556	ENSORLG00000029593	MSI1	62	80.556	Oryzias_latipes
ENSCVAG00000017463	-	89	74.312	ENSORLG00000019978	-	62	74.312	Oryzias_latipes
ENSCVAG00000017463	-	89	80.556	ENSORLG00020008266	MSI1	61	80.556	Oryzias_latipes_hni
ENSCVAG00000017463	-	89	80.556	ENSORLG00015003916	MSI1	62	80.556	Oryzias_latipes_hsok
ENSCVAG00000017463	-	89	74.312	ENSOMEG00000017536	MSI1	62	74.312	Oryzias_melastigma
ENSCVAG00000017463	-	89	80.093	ENSOMEG00000002272	-	78	80.093	Oryzias_melastigma
ENSCVAG00000017463	-	89	67.521	ENSOGAG00000003847	MSI1	64	67.521	Otolemur_garnettii
ENSCVAG00000017463	-	89	65.086	ENSOARG00000012097	MSI1	70	65.086	Ovis_aries
ENSCVAG00000017463	-	89	68.398	ENSPPAG00000043073	MSI1	70	68.398	Pan_paniscus
ENSCVAG00000017463	-	89	68.398	ENSPPRG00000000370	MSI1	64	68.398	Panthera_pardus
ENSCVAG00000017463	-	89	68.398	ENSPTIG00000008913	MSI1	74	68.398	Panthera_tigris_altaica
ENSCVAG00000017463	-	89	68.398	ENSPTRG00000005531	MSI1	64	68.398	Pan_troglodytes
ENSCVAG00000017463	-	89	68.398	ENSPANG00000006335	MSI1	64	68.398	Papio_anubis
ENSCVAG00000017463	-	89	76.959	ENSPKIG00000016497	MSI1	62	76.959	Paramormyrops_kingsleyae
ENSCVAG00000017463	-	89	74.654	ENSPKIG00000023575	-	76	74.654	Paramormyrops_kingsleyae
ENSCVAG00000017463	-	88	66.667	ENSPSIG00000009621	-	100	67.105	Pelodiscus_sinensis
ENSCVAG00000017463	-	89	68.519	ENSPSIG00000011608	-	60	68.519	Pelodiscus_sinensis
ENSCVAG00000017463	-	82	64.216	ENSPMGG00000000514	MSI1	61	64.216	Periophthalmus_magnuspinnatus
ENSCVAG00000017463	-	95	59.624	ENSPMGG00000007743	-	75	59.624	Periophthalmus_magnuspinnatus
ENSCVAG00000017463	-	89	68.398	ENSPEMG00000010491	Msi1	65	68.398	Peromyscus_maniculatus_bairdii
ENSCVAG00000017463	-	89	80.645	ENSPFOG00000008319	-	65	80.645	Poecilia_formosa
ENSCVAG00000017463	-	89	74.312	ENSPFOG00000013113	MSI1	62	74.312	Poecilia_formosa
ENSCVAG00000017463	-	89	74.312	ENSPLAG00000014025	-	62	74.312	Poecilia_latipinna
ENSCVAG00000017463	-	89	80.645	ENSPLAG00000012431	-	73	80.645	Poecilia_latipinna
ENSCVAG00000017463	-	89	80.556	ENSPMEG00000007025	-	65	80.556	Poecilia_mexicana
ENSCVAG00000017463	-	89	74.312	ENSPMEG00000012796	MSI1	62	74.312	Poecilia_mexicana
ENSCVAG00000017463	-	85	63.348	ENSPREG00000014574	-	100	63.348	Poecilia_reticulata
ENSCVAG00000017463	-	95	79.741	ENSPREG00000021416	-	78	79.741	Poecilia_reticulata
ENSCVAG00000017463	-	89	68.398	ENSPPYG00000005027	MSI1	64	68.398	Pongo_abelii
ENSCVAG00000017463	-	59	64.516	ENSPCAG00000002300	MSI1	57	64.516	Procavia_capensis
ENSCVAG00000017463	-	89	68.398	ENSPCOG00000017341	MSI1	64	68.398	Propithecus_coquereli
ENSCVAG00000017463	-	89	60.173	ENSPVAG00000002225	MSI1	70	60.173	Pteropus_vampyrus
ENSCVAG00000017463	-	89	79.358	ENSPNYG00000004379	MSI1	76	79.358	Pundamilia_nyererei
ENSCVAG00000017463	-	89	74.654	ENSPNYG00000002529	-	62	74.654	Pundamilia_nyererei
ENSCVAG00000017463	-	89	72.477	ENSPNAG00000019337	msi1	76	72.477	Pygocentrus_nattereri
ENSCVAG00000017463	-	89	68.398	ENSRNOG00000001156	Msi1	74	68.398	Rattus_norvegicus
ENSCVAG00000017463	-	89	68.398	ENSRBIG00000036889	MSI1	74	68.398	Rhinopithecus_bieti
ENSCVAG00000017463	-	89	68.398	ENSRROG00000041076	MSI1	65	68.398	Rhinopithecus_roxellana
ENSCVAG00000017463	-	89	68.398	ENSSBOG00000030259	MSI1	66	68.398	Saimiri_boliviensis_boliviensis
ENSCVAG00000017463	-	89	66.667	ENSSHAG00000006834	MSI1	76	66.667	Sarcophilus_harrisii
ENSCVAG00000017463	-	89	75.000	ENSSFOG00015005350	MSI1	77	75.000	Scleropages_formosus
ENSCVAG00000017463	-	89	77.419	ENSSFOG00015014964	-	63	77.419	Scleropages_formosus
ENSCVAG00000017463	-	89	79.724	ENSSMAG00000009156	-	77	76.498	Scophthalmus_maximus
ENSCVAG00000017463	-	89	67.431	ENSSMAG00000018824	MSI1	65	67.431	Scophthalmus_maximus
ENSCVAG00000017463	-	89	74.312	ENSSDUG00000001027	MSI1	62	74.312	Seriola_dumerili
ENSCVAG00000017463	-	89	80.645	ENSSDUG00000022697	-	76	80.645	Seriola_dumerili
ENSCVAG00000017463	-	89	67.532	ENSSLDG00000018706	-	81	67.532	Seriola_lalandi_dorsalis
ENSCVAG00000017463	-	89	74.312	ENSSLDG00000016832	MSI1	62	74.312	Seriola_lalandi_dorsalis
ENSCVAG00000017463	-	89	70.909	ENSSPUG00000015741	MSI1	63	70.909	Sphenodon_punctatus
ENSCVAG00000017463	-	89	80.734	ENSSPAG00000013098	-	81	80.734	Stegastes_partitus
ENSCVAG00000017463	-	85	57.416	ENSSPAG00000014085	-	100	57.416	Stegastes_partitus
ENSCVAG00000017463	-	89	67.965	ENSSSCG00000029365	MSI1	74	67.965	Sus_scrofa
ENSCVAG00000017463	-	89	68.122	ENSTGUG00000009534	MSI1	67	68.122	Taeniopygia_guttata
ENSCVAG00000017463	-	88	74.884	ENSTRUG00000016249	MSI1	99	68.465	Takifugu_rubripes
ENSCVAG00000017463	-	89	62.963	ENSTRUG00000015636	-	65	62.963	Takifugu_rubripes
ENSCVAG00000017463	-	89	57.727	ENSTNIG00000019814	-	65	57.613	Tetraodon_nigroviridis
ENSCVAG00000017463	-	89	69.444	ENSTNIG00000011469	MSI1	61	69.444	Tetraodon_nigroviridis
ENSCVAG00000017463	-	89	60.000	ENSTBEG00000007182	MSI1	85	60.000	Tupaia_belangeri
ENSCVAG00000017463	-	51	60.294	ENSUAMG00000015514	MSI1	59	60.294	Ursus_americanus
ENSCVAG00000017463	-	89	65.801	ENSUMAG00000006176	MSI1	65	65.801	Ursus_maritimus
ENSCVAG00000017463	-	89	68.398	ENSVVUG00000020993	MSI1	69	68.398	Vulpes_vulpes
ENSCVAG00000017463	-	89	68.056	ENSXETG00000012216	msi1	64	65.517	Xenopus_tropicalis
ENSCVAG00000017463	-	92	72.646	ENSXCOG00000017605	MSI1	81	72.646	Xiphophorus_couchianus
ENSCVAG00000017463	-	89	81.019	ENSXMAG00000018237	-	76	81.019	Xiphophorus_maculatus
ENSCVAG00000017463	-	89	75.115	ENSXMAG00000027103	MSI1	76	67.281	Xiphophorus_maculatus