EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017520 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 1168 bases
Position: chrKL653823.1:67606-68773
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014806	PARP	PF00644.20	2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031256	-	702	-	ENSCVAP00000014806	233 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000017520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017520	-	86	35.909	ENSCVAG00000009553	PARP11	67	35.909
ENSCVAG00000017520	-	83	45.960	ENSCVAG00000000686	-	79	45.960
ENSCVAG00000017520	-	99	41.841	ENSCVAG00000014329	-	74	41.841
ENSCVAG00000017520	-	63	35.099	ENSCVAG00000009699	parp11	66	30.348
ENSCVAG00000017520	-	83	46.392	ENSCVAG00000009352	-	58	43.850

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017520	-	65	46.835	ENSAPOG00000007412	-	57	46.835	Acanthochromis_polyacanthus
ENSCVAG00000017520	-	83	65.285	ENSACIG00000020176	-	70	65.285	Amphilophus_citrinellus
ENSCVAG00000017520	-	83	46.193	ENSACIG00000009912	-	62	46.193	Amphilophus_citrinellus
ENSCVAG00000017520	-	83	47.208	ENSACIG00000009927	-	96	47.208	Amphilophus_citrinellus
ENSCVAG00000017520	-	85	45.771	ENSACIG00000003944	si:ch211-219a4.3	52	45.960	Amphilophus_citrinellus
ENSCVAG00000017520	-	95	44.889	ENSAOCG00000002980	-	70	44.889	Amphiprion_ocellaris
ENSCVAG00000017520	-	82	44.388	ENSACLG00000013170	-	90	44.388	Astatotilapia_calliptera
ENSCVAG00000017520	-	91	43.379	ENSACLG00000013093	-	67	43.379	Astatotilapia_calliptera
ENSCVAG00000017520	-	83	44.103	ENSACLG00000005418	-	56	45.763	Astatotilapia_calliptera
ENSCVAG00000017520	-	83	45.408	ENSCSEG00000017936	si:ch211-219a4.3	53	45.408	Cynoglossus_semilaevis
ENSCVAG00000017520	-	82	64.211	ENSCSEG00000020071	-	55	64.211	Cynoglossus_semilaevis
ENSCVAG00000017520	-	85	47.500	ENSFHEG00000008820	-	88	47.500	Fundulus_heteroclitus
ENSCVAG00000017520	-	86	36.792	ENSGMOG00000011231	-	64	37.143	Gadus_morhua
ENSCVAG00000017520	-	83	45.178	ENSGAFG00000002533	-	63	45.178	Gambusia_affinis
ENSCVAG00000017520	-	85	71.066	ENSGAFG00000001814	-	53	70.202	Gambusia_affinis
ENSCVAG00000017520	-	83	45.641	ENSHBUG00000005369	-	57	45.641	Haplochromis_burtoni
ENSCVAG00000017520	-	78	48.370	ENSKMAG00000003908	-	60	48.370	Kryptolebias_marmoratus
ENSCVAG00000017520	-	78	48.913	ENSKMAG00000012870	-	56	48.913	Kryptolebias_marmoratus
ENSCVAG00000017520	-	82	45.596	ENSLACG00000009107	-	95	45.596	Latimeria_chalumnae
ENSCVAG00000017520	-	85	45.274	ENSMZEG00005025678	si:ch211-219a4.3	57	45.455	Maylandia_zebra
ENSCVAG00000017520	-	86	49.758	ENSMZEG00005026601	-	72	49.758	Maylandia_zebra
ENSCVAG00000017520	-	93	38.532	ENSMODG00000007157	-	70	38.532	Monodelphis_domestica
ENSCVAG00000017520	-	66	44.872	ENSMALG00000017146	-	77	44.872	Monopterus_albus
ENSCVAG00000017520	-	73	41.279	ENSMALG00000000434	-	84	41.279	Monopterus_albus
ENSCVAG00000017520	-	79	45.699	ENSNBRG00000004048	-	97	45.699	Neolamprologus_brichardi
ENSCVAG00000017520	-	82	47.423	ENSNBRG00000004017	-	91	47.423	Neolamprologus_brichardi
ENSCVAG00000017520	-	83	45.685	ENSNBRG00000003877	-	67	45.685	Neolamprologus_brichardi
ENSCVAG00000017520	-	83	45.641	ENSORLG00015021971	si:ch211-219a4.3	55	45.641	Oryzias_latipes_hsok
ENSCVAG00000017520	-	88	42.105	ENSORLG00015003387	-	61	42.105	Oryzias_latipes_hsok
ENSCVAG00000017520	-	88	43.868	ENSOMEG00000016395	-	66	43.868	Oryzias_melastigma
ENSCVAG00000017520	-	83	46.429	ENSOMEG00000019715	si:ch211-219a4.3	56	46.429	Oryzias_melastigma
ENSCVAG00000017520	-	84	44.776	ENSOMEG00000016369	-	60	44.776	Oryzias_melastigma
ENSCVAG00000017520	-	88	43.602	ENSOMEG00000016380	-	62	43.602	Oryzias_melastigma
ENSCVAG00000017520	-	83	50.000	ENSOMEG00000016408	-	60	50.000	Oryzias_melastigma
ENSCVAG00000017520	-	83	45.918	ENSPKIG00000004135	-	56	45.918	Paramormyrops_kingsleyae
ENSCVAG00000017520	-	85	38.647	ENSPMGG00000017987	-	92	38.647	Periophthalmus_magnuspinnatus
ENSCVAG00000017520	-	96	52.232	ENSPMGG00000004482	-	59	52.232	Periophthalmus_magnuspinnatus
ENSCVAG00000017520	-	83	46.429	ENSPFOG00000021893	-	51	46.429	Poecilia_formosa
ENSCVAG00000017520	-	76	45.304	ENSPLAG00000004362	-	65	45.304	Poecilia_latipinna
ENSCVAG00000017520	-	86	77.114	ENSPLAG00000023515	-	72	77.114	Poecilia_latipinna
ENSCVAG00000017520	-	86	77.114	ENSPMEG00000004356	-	72	77.114	Poecilia_mexicana
ENSCVAG00000017520	-	83	77.320	ENSPREG00000007470	-	91	76.374	Poecilia_reticulata
ENSCVAG00000017520	-	83	46.701	ENSPREG00000003560	-	61	46.701	Poecilia_reticulata
ENSCVAG00000017520	-	76	46.893	ENSPNYG00000001714	-	51	46.893	Pundamilia_nyererei
ENSCVAG00000017520	-	91	42.009	ENSPNYG00000021303	-	68	42.009	Pundamilia_nyererei
ENSCVAG00000017520	-	83	50.510	ENSPNYG00000021378	-	60	50.510	Pundamilia_nyererei
ENSCVAG00000017520	-	85	45.274	ENSPNYG00000013937	-	56	45.455	Pundamilia_nyererei
ENSCVAG00000017520	-	84	45.960	ENSSFOG00015001605	-	68	45.960	Scleropages_formosus
ENSCVAG00000017520	-	92	71.889	ENSSDUG00000001575	-	50	72.772	Seriola_dumerili
ENSCVAG00000017520	-	87	46.698	ENSSLDG00000005960	-	59	46.698	Seriola_lalandi_dorsalis
ENSCVAG00000017520	-	87	41.981	ENSTRUG00000004579	-	61	41.981	Takifugu_rubripes
ENSCVAG00000017520	-	87	46.602	ENSUAMG00000004120	-	54	46.602	Ursus_americanus
ENSCVAG00000017520	-	83	43.434	ENSXETG00000010161	parp14.3	66	43.434	Xenopus_tropicalis
ENSCVAG00000017520	-	76	34.783	ENSXETG00000031130	-	50	34.783	Xenopus_tropicalis
ENSCVAG00000017520	-	83	46.667	ENSXCOG00000014707	-	55	46.667	Xiphophorus_couchianus
ENSCVAG00000017520	-	66	42.581	ENSXCOG00000014714	-	72	42.581	Xiphophorus_couchianus
ENSCVAG00000017520	-	80	46.316	ENSXMAG00000010352	-	82	46.316	Xiphophorus_maculatus