EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017536 (Gene tree)
Gene ID: 107102809
Gene Symbol: -
Alias: -
Full Name: poly
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 18247 bases
Position: chrKL653823.1:37321-55567
Accession: 107102809
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000029615	PARP	PF00644.20	1.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022742	-	6181	XM_015402245	ENSCVAP00000029615	1595 (aa)	XP_015257731	UPI000742C7EA

Gene Model

Click here to download ENSCVAG00000017536's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017536's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017536	-	82	30.996	ENSCVAG00000009352	-	86	46.114
ENSCVAG00000017536	-	88	30.277	ENSCVAG00000014299	-	97	30.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017536	-	50	74.372	ENSAOCG00000017389	-	91	74.372	Amphiprion_ocellaris
ENSCVAG00000017536	-	100	61.572	ENSAPEG00000001687	-	100	76.289	Amphiprion_percula
ENSCVAG00000017536	-	54	33.380	ENSAPEG00000003700	-	93	33.333	Amphiprion_percula
ENSCVAG00000017536	-	99	58.158	ENSATEG00000011611	-	99	58.158	Anabas_testudineus
ENSCVAG00000017536	-	65	36.082	ENSATEG00000002587	-	99	36.082	Anabas_testudineus
ENSCVAG00000017536	-	99	31.343	ENSACAG00000009769	-	89	31.343	Anolis_carolinensis
ENSCVAG00000017536	-	55	43.077	ENSACLG00000005418	-	98	43.077	Astatotilapia_calliptera
ENSCVAG00000017536	-	99	30.870	ENSACLG00000013074	-	99	30.705	Astatotilapia_calliptera
ENSCVAG00000017536	-	99	59.014	ENSACLG00000001129	-	94	76.471	Astatotilapia_calliptera
ENSCVAG00000017536	-	53	33.333	ENSAMXG00000031852	-	98	33.333	Astyanax_mexicanus
ENSCVAG00000017536	-	92	37.333	ENSAMXG00000035876	si:cabz01030277.1	98	37.333	Astyanax_mexicanus
ENSCVAG00000017536	-	54	31.224	ENSAMXG00000043329	-	99	31.224	Astyanax_mexicanus
ENSCVAG00000017536	-	77	44.949	ENSBTAG00000016656	PARP14	84	44.949	Bos_taurus
ENSCVAG00000017536	-	65	30.455	ENSCPOG00000020020	PARP14	62	38.235	Cavia_porcellus
ENSCVAG00000017536	-	81	30.480	ENSCLAG00000009862	PARP14	72	30.140	Chinchilla_lanigera
ENSCVAG00000017536	-	60	36.538	ENSCHOG00000010569	PARP14	55	37.288	Choloepus_hoffmanni
ENSCVAG00000017536	-	52	32.680	ENSCSEG00000017936	si:ch211-219a4.3	99	32.680	Cynoglossus_semilaevis
ENSCVAG00000017536	-	66	32.556	ENSDARG00000040445	si:ch211-219a4.3	99	35.019	Danio_rerio
ENSCVAG00000017536	-	99	32.727	ENSDARG00000099377	si:cabz01030277.1	99	33.879	Danio_rerio
ENSCVAG00000017536	-	92	32.936	ENSDARG00000100612	si:ch211-163c2.1	96	32.855	Danio_rerio
ENSCVAG00000017536	-	79	31.694	ENSETEG00000002790	PARP14	72	31.694	Echinops_telfairi
ENSCVAG00000017536	-	71	33.793	ENSECAG00000024988	PARP14	66	33.121	Equus_caballus
ENSCVAG00000017536	-	75	37.540	ENSELUG00000009798	si:ch211-219a4.3	67	37.540	Esox_lucius
ENSCVAG00000017536	-	99	45.177	ENSELUG00000007568	-	99	45.238	Esox_lucius
ENSCVAG00000017536	-	100	74.234	ENSFHEG00000008557	-	100	75.374	Fundulus_heteroclitus
ENSCVAG00000017536	-	55	31.126	ENSGMOG00000011231	-	99	35.833	Gadus_morhua
ENSCVAG00000017536	-	53	31.461	ENSGAFG00000009879	si:ch211-219a4.3	99	31.882	Gambusia_affinis
ENSCVAG00000017536	-	100	70.338	ENSGAFG00000001814	-	92	81.633	Gambusia_affinis
ENSCVAG00000017536	-	64	56.840	ENSGACG00000018943	-	99	56.840	Gasterosteus_aculeatus
ENSCVAG00000017536	-	87	31.126	ENSGAGG00000017725	-	75	31.126	Gopherus_agassizii
ENSCVAG00000017536	-	99	59.139	ENSHBUG00000018235	-	99	70.256	Haplochromis_burtoni
ENSCVAG00000017536	-	99	32.349	ENSIPUG00000008165	si:cabz01030277.1	99	32.718	Ictalurus_punctatus
ENSCVAG00000017536	-	99	63.760	ENSKMAG00000016827	-	99	72.308	Kryptolebias_marmoratus
ENSCVAG00000017536	-	56	36.888	ENSKMAG00000000939	-	92	36.888	Kryptolebias_marmoratus
ENSCVAG00000017536	-	99	37.256	ENSLOCG00000000942	-	99	37.057	Lepisosteus_oculatus
ENSCVAG00000017536	-	68	34.995	ENSLOCG00000000239	si:cabz01030277.1	99	35.091	Lepisosteus_oculatus
ENSCVAG00000017536	-	99	32.729	ENSMAMG00000014821	si:cabz01030277.1	99	33.130	Mastacembelus_armatus
ENSCVAG00000017536	-	99	58.667	ENSMAMG00000012368	-	99	58.791	Mastacembelus_armatus
ENSCVAG00000017536	-	53	33.103	ENSMZEG00005025678	si:ch211-219a4.3	89	45.614	Maylandia_zebra
ENSCVAG00000017536	-	99	58.827	ENSMZEG00005020476	-	99	58.702	Maylandia_zebra
ENSCVAG00000017536	-	91	32.643	ENSMZEG00005021082	-	99	32.479	Maylandia_zebra
ENSCVAG00000017536	-	73	32.624	ENSMOCG00000021121	Parp14	75	32.624	Microtus_ochrogaster
ENSCVAG00000017536	-	83	31.055	ENSMALG00000015837	-	98	30.900	Monopterus_albus
ENSCVAG00000017536	-	56	41.758	ENSOPRG00000013872	PARP14	51	41.758	Ochotona_princeps
ENSCVAG00000017536	-	56	31.241	ENSONIG00000012986	-	99	31.514	Oreochromis_niloticus
ENSCVAG00000017536	-	51	43.367	ENSONIG00000004517	-	99	43.367	Oreochromis_niloticus
ENSCVAG00000017536	-	58	61.082	ENSONIG00000007870	-	99	61.082	Oreochromis_niloticus
ENSCVAG00000017536	-	99	32.335	ENSORLG00020005938	-	99	32.878	Oryzias_latipes_hni
ENSCVAG00000017536	-	92	31.170	ENSORLG00015021971	si:ch211-219a4.3	88	44.348	Oryzias_latipes_hsok
ENSCVAG00000017536	-	87	35.294	ENSOMEG00000019715	si:ch211-219a4.3	93	46.087	Oryzias_melastigma
ENSCVAG00000017536	-	99	53.607	ENSOMEG00000022143	-	99	54.759	Oryzias_melastigma
ENSCVAG00000017536	-	54	31.787	ENSPKIG00000004027	-	99	31.787	Paramormyrops_kingsleyae
ENSCVAG00000017536	-	99	39.002	ENSPKIG00000022431	-	99	38.694	Paramormyrops_kingsleyae
ENSCVAG00000017536	-	66	37.097	ENSPMAG00000001173	-	53	37.097	Petromyzon_marinus
ENSCVAG00000017536	-	100	70.463	ENSPFOG00000000012	-	100	70.776	Poecilia_formosa
ENSCVAG00000017536	-	99	31.062	ENSPFOG00000005470	-	99	31.710	Poecilia_formosa
ENSCVAG00000017536	-	100	70.651	ENSPMEG00000004328	-	94	77.551	Poecilia_mexicana
ENSCVAG00000017536	-	100	71.652	ENSPREG00000007508	-	100	74.468	Poecilia_reticulata
ENSCVAG00000017536	-	53	34.066	ENSPREG00000003544	-	99	34.160	Poecilia_reticulata
ENSCVAG00000017536	-	63	30.856	ENSPVAG00000012722	PARP14	63	30.762	Pteropus_vampyrus
ENSCVAG00000017536	-	54	32.237	ENSPNYG00000013937	-	89	45.614	Pundamilia_nyererei
ENSCVAG00000017536	-	68	32.006	ENSSBOG00000032798	PARP14	65	32.006	Saimiri_boliviensis_boliviensis
ENSCVAG00000017536	-	91	30.818	ENSSFOG00015001605	-	90	47.059	Scleropages_formosus
ENSCVAG00000017536	-	100	59.963	ENSSDUG00000001575	-	100	72.772	Seriola_dumerili
ENSCVAG00000017536	-	81	32.690	ENSSDUG00000007589	-	91	33.129	Seriola_dumerili
ENSCVAG00000017536	-	100	60.197	ENSSLDG00000005702	-	98	67.580	Seriola_lalandi_dorsalis
ENSCVAG00000017536	-	69	31.273	ENSSARG00000011299	PARP14	62	30.783	Sorex_araneus
ENSCVAG00000017536	-	99	33.293	ENSSPAG00000004785	-	99	33.005	Stegastes_partitus
ENSCVAG00000017536	-	100	60.359	ENSSPAG00000023229	-	99	60.421	Stegastes_partitus
ENSCVAG00000017536	-	74	32.349	ENSSPAG00000004771	-	95	32.238	Stegastes_partitus
ENSCVAG00000017536	-	54	31.232	ENSTRUG00000004579	-	94	44.898	Takifugu_rubripes
ENSCVAG00000017536	-	77	46.193	ENSVPAG00000002158	PARP14	71	46.193	Vicugna_pacos
ENSCVAG00000017536	-	66	40.892	ENSVVUG00000022533	PARP14	62	40.892	Vulpes_vulpes
ENSCVAG00000017536	-	50	47.799	ENSXCOG00000014707	-	91	47.799	Xiphophorus_couchianus
ENSCVAG00000017536	-	99	71.071	ENSXMAG00000016244	-	99	71.071	Xiphophorus_maculatus