EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000017568 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ribosomal RNA processing protein 1 homolog A-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 15186 bases
Position: chrKL653822.1:167706-182891
Accession: 107102800
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014826	Nop52	PF05997.12	1.7e-62	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022761	-	1152	XM_015402231	ENSCVAP00000014826	383 (aa)	XP_015257717	-

Gene Model

Click here to download ENSCVAG00000017568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017568's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017568	-	88	45.455	ENSG00000160214	RRP1	93	54.762	Homo_sapiens
ENSCVAG00000017568	-	97	45.408	ENSAMEG00000011448	RRP1	85	43.590	Ailuropoda_melanoleuca
ENSCVAG00000017568	-	72	62.143	ENSACIG00000019121	rrp1	62	57.325	Amphilophus_citrinellus
ENSCVAG00000017568	-	96	65.263	ENSAOCG00000017894	-	83	64.416	Amphiprion_ocellaris
ENSCVAG00000017568	-	85	44.838	ENSANAG00000037815	RRP1	77	45.190	Aotus_nancymaae
ENSCVAG00000017568	-	50	72.251	ENSACLG00000010281	-	75	72.251	Astatotilapia_calliptera
ENSCVAG00000017568	-	93	44.505	ENSBTAG00000003981	RRP1	80	44.505	Bos_taurus
ENSCVAG00000017568	-	89	45.634	ENSCJAG00000043205	RRP1	72	45.787	Callithrix_jacchus
ENSCVAG00000017568	-	93	46.486	ENSCAFG00000010646	RRP1	82	43.702	Canis_familiaris
ENSCVAG00000017568	-	93	46.486	ENSCAFG00020018979	RRP1	76	48.000	Canis_lupus_dingo
ENSCVAG00000017568	-	94	43.158	ENSCAFG00020018901	RRP1B	51	42.971	Canis_lupus_dingo
ENSCVAG00000017568	-	93	43.562	ENSCHIG00000020948	RRP1	80	43.869	Capra_hircus
ENSCVAG00000017568	-	88	45.152	ENSTSYG00000012831	RRP1	78	44.875	Carlito_syrichta
ENSCVAG00000017568	-	75	41.463	ENSCAPG00000008576	RRP1	81	42.593	Cavia_aperea
ENSCVAG00000017568	-	90	42.340	ENSCPOG00000002396	RRP1B	51	41.711	Cavia_porcellus
ENSCVAG00000017568	-	88	45.977	ENSCPOG00000038986	RRP1	77	46.197	Cavia_porcellus
ENSCVAG00000017568	-	93	43.396	ENSCCAG00000029384	RRP1B	55	43.127	Cebus_capucinus
ENSCVAG00000017568	-	89	46.197	ENSCCAG00000029828	RRP1	75	46.000	Cebus_capucinus
ENSCVAG00000017568	-	86	45.977	ENSCATG00000015632	RRP1	74	46.377	Cercocebus_atys
ENSCVAG00000017568	-	88	46.724	ENSCLAG00000011639	RRP1	77	46.724	Chinchilla_lanigera
ENSCVAG00000017568	-	90	37.562	ENSCLAG00000005622	RRP1B	56	37.071	Chinchilla_lanigera
ENSCVAG00000017568	-	83	45.289	ENSCSAG00000007936	RRP1	99	45.758	Chlorocebus_sabaeus
ENSCVAG00000017568	-	85	39.264	ENSCHOG00000002426	-	55	39.264	Choloepus_hoffmanni
ENSCVAG00000017568	-	87	36.571	ENSCING00000003304	-	75	36.571	Ciona_intestinalis
ENSCVAG00000017568	-	72	43.554	ENSCANG00000042611	RRP1	68	43.945	Colobus_angolensis_palliatus
ENSCVAG00000017568	-	91	40.659	ENSCGRG00001023882	-	62	59.722	Cricetulus_griseus_chok1gshd
ENSCVAG00000017568	-	88	47.472	ENSCGRG00001011920	Rrp1	79	46.927	Cricetulus_griseus_chok1gshd
ENSCVAG00000017568	-	88	47.472	ENSCGRG00000008915	Rrp1	79	46.927	Cricetulus_griseus_crigri
ENSCVAG00000017568	-	91	62.674	ENSCSEG00000020711	-	71	61.316	Cynoglossus_semilaevis
ENSCVAG00000017568	-	87	52.586	ENSDARG00000103337	rrp1	51	50.136	Danio_rerio
ENSCVAG00000017568	-	96	42.593	ENSDNOG00000019880	RRP1	84	41.645	Dasypus_novemcinctus
ENSCVAG00000017568	-	76	41.694	ENSDORG00000002104	Rrp1	75	42.345	Dipodomys_ordii
ENSCVAG00000017568	-	81	38.750	ENSETEG00000002963	-	71	37.615	Echinops_telfairi
ENSCVAG00000017568	-	86	47.093	ENSEASG00005001673	RRP1	77	47.953	Equus_asinus_asinus
ENSCVAG00000017568	-	86	48.094	ENSECAG00000015703	RRP1	77	48.547	Equus_caballus
ENSCVAG00000017568	-	98	57.381	ENSELUG00000015885	-	92	58.195	Esox_lucius
ENSCVAG00000017568	-	93	41.489	ENSFCAG00000010272	RRP1B	50	40.489	Felis_catus
ENSCVAG00000017568	-	97	45.361	ENSFCAG00000008434	RRP1	85	45.619	Felis_catus
ENSCVAG00000017568	-	89	46.307	ENSFDAG00000013728	RRP1	76	46.154	Fukomys_damarensis
ENSCVAG00000017568	-	92	59.722	ENSGMOG00000001953	-	53	60.278	Gadus_morhua
ENSCVAG00000017568	-	96	64.116	ENSGACG00000001438	rrp1	59	63.757	Gasterosteus_aculeatus
ENSCVAG00000017568	-	92	51.648	ENSGAGG00000000375	RRP1B	50	49.482	Gopherus_agassizii
ENSCVAG00000017568	-	89	45.609	ENSGGOG00000000173	RRP1	75	46.286	Gorilla_gorilla
ENSCVAG00000017568	-	90	62.568	ENSHBUG00000003766	-	50	60.982	Haplochromis_burtoni
ENSCVAG00000017568	-	93	40.591	ENSHGLG00000004968	RRP1B	53	40.771	Heterocephalus_glaber_female
ENSCVAG00000017568	-	88	47.536	ENSHGLG00000017085	RRP1	73	47.536	Heterocephalus_glaber_female
ENSCVAG00000017568	-	90	54.301	ENSIPUG00000000673	-	76	52.868	Ictalurus_punctatus
ENSCVAG00000017568	-	96	43.617	ENSSTOG00000011116	RRP1	85	44.297	Ictidomys_tridecemlineatus
ENSCVAG00000017568	-	87	42.697	ENSSTOG00000011790	RRP1B	51	40.650	Ictidomys_tridecemlineatus
ENSCVAG00000017568	-	87	40.456	ENSJJAG00000021279	Rrp1b	51	38.601	Jaculus_jaculus
ENSCVAG00000017568	-	88	46.857	ENSJJAG00000018886	Rrp1	87	44.072	Jaculus_jaculus
ENSCVAG00000017568	-	97	64.160	ENSKMAG00000005539	rrp1	58	63.659	Kryptolebias_marmoratus
ENSCVAG00000017568	-	89	66.027	ENSLBEG00000021417	RRP1	93	65.499	Labrus_bergylta
ENSCVAG00000017568	-	97	46.494	ENSLACG00000017332	-	52	45.974	Latimeria_chalumnae
ENSCVAG00000017568	-	90	55.056	ENSLOCG00000004064	-	50	54.223	Lepisosteus_oculatus
ENSCVAG00000017568	-	88	44.663	ENSLAFG00000022901	RRP1	80	44.663	Loxodonta_africana
ENSCVAG00000017568	-	94	43.850	ENSLAFG00000000766	RRP1B	87	42.933	Loxodonta_africana
ENSCVAG00000017568	-	89	46.418	ENSMFAG00000003202	RRP1	75	46.552	Macaca_fascicularis
ENSCVAG00000017568	-	88	45.714	ENSMMUG00000012304	RRP1	75	45.892	Macaca_mulatta
ENSCVAG00000017568	-	89	45.845	ENSMNEG00000031210	RRP1	75	45.977	Macaca_nemestrina
ENSCVAG00000017568	-	78	44.872	ENSMLEG00000037797	RRP1	73	45.192	Mandrillus_leucophaeus
ENSCVAG00000017568	-	89	41.643	ENSMAUG00000017653	Rrp1	76	40.896	Mesocricetus_auratus
ENSCVAG00000017568	-	93	43.631	ENSMICG00000004686	RRP1B	50	43.089	Microcebus_murinus
ENSCVAG00000017568	-	88	46.779	ENSMICG00000004700	RRP1	88	43.257	Microcebus_murinus
ENSCVAG00000017568	-	88	39.747	ENSMOCG00000015687	Rrp1	89	38.695	Microtus_ochrogaster
ENSCVAG00000017568	-	91	60.845	ENSMMOG00000019175	rrp1	92	61.972	Mola_mola
ENSCVAG00000017568	-	90	46.045	ENSMODG00000021033	RRP1B	51	44.924	Monodelphis_domestica
ENSCVAG00000017568	-	95	44.267	ENSMODG00000021036	-	56	44.267	Monodelphis_domestica
ENSCVAG00000017568	-	96	67.282	ENSMALG00000010310	rrp1	99	66.491	Monopterus_albus
ENSCVAG00000017568	-	88	42.543	MGP_CAROLIEiJ_G0015508	Rrp1	63	58.333	Mus_caroli
ENSCVAG00000017568	-	88	38.983	MGP_CAROLIEiJ_G0021376	Rrp1b	57	58.209	Mus_caroli
ENSCVAG00000017568	-	84	40.533	ENSMUSG00000058392	Rrp1b	57	59.701	Mus_musculus
ENSCVAG00000017568	-	88	42.574	ENSMUSG00000061032	Rrp1	63	58.333	Mus_musculus
ENSCVAG00000017568	-	80	58.333	MGP_PahariEiJ_G0030921	Rrp1	60	58.333	Mus_pahari
ENSCVAG00000017568	-	91	39.560	MGP_PahariEiJ_G0023695	Rrp1b	60	58.333	Mus_pahari
ENSCVAG00000017568	-	88	40.395	MGP_SPRETEiJ_G0022290	Rrp1b	57	59.701	Mus_spretus
ENSCVAG00000017568	-	80	58.333	MGP_SPRETEiJ_G0016321	Rrp1	63	58.333	Mus_spretus
ENSCVAG00000017568	-	95	40.888	ENSMPUG00000009826	RRP1	67	51.220	Mustela_putorius_furo
ENSCVAG00000017568	-	98	41.645	ENSMLUG00000007738	RRP1B	51	41.602	Myotis_lucifugus
ENSCVAG00000017568	-	83	51.092	ENSMLUG00000017788	RRP1	69	50.806	Myotis_lucifugus
ENSCVAG00000017568	-	80	45.098	ENSNGAG00000022344	Rrp1	89	35.431	Nannospalax_galili
ENSCVAG00000017568	-	52	65.385	ENSNBRG00000021980	-	52	65.534	Neolamprologus_brichardi
ENSCVAG00000017568	-	93	42.667	ENSNLEG00000001490	RRP1B	50	42.818	Nomascus_leucogenys
ENSCVAG00000017568	-	89	45.378	ENSNLEG00000034734	RRP1	75	46.264	Nomascus_leucogenys
ENSCVAG00000017568	-	89	39.769	ENSOPRG00000001319	RRP1	96	39.769	Ochotona_princeps
ENSCVAG00000017568	-	86	45.723	ENSOANG00000006472	-	96	44.882	Ornithorhynchus_anatinus
ENSCVAG00000017568	-	89	42.857	ENSOGAG00000009872	RRP1B	57	41.176	Otolemur_garnettii
ENSCVAG00000017568	-	92	45.013	ENSOGAG00000006105	RRP1	77	47.965	Otolemur_garnettii
ENSCVAG00000017568	-	83	45.289	ENSOARG00000011434	RRP1	74	45.619	Ovis_aries
ENSCVAG00000017568	-	88	45.455	ENSPPAG00000029050	RRP1	75	46.000	Pan_paniscus
ENSCVAG00000017568	-	95	45.600	ENSPPRG00000010656	RRP1	83	45.867	Panthera_pardus
ENSCVAG00000017568	-	93	41.667	ENSPPRG00000010356	RRP1B	50	41.304	Panthera_pardus
ENSCVAG00000017568	-	82	40.367	ENSPTIG00000019473	RRP1	75	41.141	Panthera_tigris_altaica
ENSCVAG00000017568	-	81	39.091	ENSPTIG00000016894	RRP1B	54	37.963	Panthera_tigris_altaica
ENSCVAG00000017568	-	88	45.739	ENSPTRG00000013962	RRP1	75	46.286	Pan_troglodytes
ENSCVAG00000017568	-	89	45.455	ENSPANG00000015097	RRP1	76	45.763	Papio_anubis
ENSCVAG00000017568	-	91	49.863	ENSPMGG00000007512	-	94	47.804	Periophthalmus_magnuspinnatus
ENSCVAG00000017568	-	88	47.839	ENSPEMG00000018421	Rrp1	79	47.839	Peromyscus_maniculatus_bairdii
ENSCVAG00000017568	-	93	44.658	ENSPCIG00000015513	RRP1B	51	45.205	Phascolarctos_cinereus
ENSCVAG00000017568	-	90	45.658	ENSPCIG00000015523	-	77	44.847	Phascolarctos_cinereus
ENSCVAG00000017568	-	97	71.392	ENSPLAG00000016684	-	56	71.392	Poecilia_latipinna
ENSCVAG00000017568	-	88	45.455	ENSPPYG00000011474	RRP1	75	45.714	Pongo_abelii
ENSCVAG00000017568	-	73	37.716	ENSPCAG00000008370	-	64	40.254	Procavia_capensis
ENSCVAG00000017568	-	89	45.658	ENSPCOG00000017706	RRP1	83	44.267	Propithecus_coquereli
ENSCVAG00000017568	-	93	42.973	ENSPCOG00000017927	RRP1B	50	42.703	Propithecus_coquereli
ENSCVAG00000017568	-	88	45.455	ENSRNOG00000001203	Rrp1	79	46.023	Rattus_norvegicus
ENSCVAG00000017568	-	89	45.170	ENSRBIG00000032082	RRP1	75	46.132	Rhinopithecus_bieti
ENSCVAG00000017568	-	89	45.170	ENSRROG00000039799	RRP1	75	46.132	Rhinopithecus_roxellana
ENSCVAG00000017568	-	93	42.933	ENSRROG00000031499	RRP1B	53	43.089	Rhinopithecus_roxellana
ENSCVAG00000017568	-	89	44.957	ENSSBOG00000034689	RRP1	76	45.014	Saimiri_boliviensis_boliviensis
ENSCVAG00000017568	-	76	43.574	ENSSHAG00000010304	-	92	42.574	Sarcophilus_harrisii
ENSCVAG00000017568	-	82	50.578	ENSSFOG00015003932	-	57	49.598	Scleropages_formosus
ENSCVAG00000017568	-	96	66.146	ENSSMAG00000016847	-	91	65.104	Scophthalmus_maximus
ENSCVAG00000017568	-	94	43.243	ENSSSCG00000021698	RRP1B	56	43.243	Sus_scrofa
ENSCVAG00000017568	-	93	45.179	ENSSSCG00000037061	RRP1	81	45.179	Sus_scrofa
ENSCVAG00000017568	-	89	61.453	ENSTRUG00000017592	rrp1	99	61.864	Takifugu_rubripes
ENSCVAG00000017568	-	89	59.207	ENSTNIG00000005053	rrp1	56	60.340	Tetraodon_nigroviridis
ENSCVAG00000017568	-	83	40.469	ENSTBEG00000000422	RRP1B	58	40.774	Tupaia_belangeri
ENSCVAG00000017568	-	73	42.857	ENSTTRG00000011162	RRP1	63	42.365	Tursiops_truncatus
ENSCVAG00000017568	-	93	42.623	ENSTTRG00000000723	RRP1B	50	41.644	Tursiops_truncatus
ENSCVAG00000017568	-	66	37.500	ENSUAMG00000014189	-	78	36.704	Ursus_americanus
ENSCVAG00000017568	-	93	42.667	ENSUAMG00000026765	RRP1B	53	41.287	Ursus_americanus
ENSCVAG00000017568	-	81	45.141	ENSUMAG00000025507	RRP1	82	41.049	Ursus_maritimus
ENSCVAG00000017568	-	81	39.514	ENSUMAG00000025510	RRP1B	62	38.906	Ursus_maritimus
ENSCVAG00000017568	-	55	36.283	ENSVVUG00000024498	-	61	37.247	Vulpes_vulpes
ENSCVAG00000017568	-	93	43.850	ENSXETG00000013683	rrp1b	57	43.784	Xenopus_tropicalis
ENSCVAG00000017568	-	97	68.514	ENSXMAG00000023123	-	50	68.514	Xiphophorus_maculatus