EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017584 (Gene tree)
Gene ID: 107088611
Gene Symbol: chd7
Alias: si:ch211-197o6.2|wu:cegs2051|wu:fb37f10|wu:fb39h04|wu:fd19h06
Full Name: chromodomain helicase DNA binding protein 7
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 83150 bases
Position: chrKL652724.1:440317-523466
Accession: 107088611
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014870	ResIII	PF04851.15	1e-05	1	1
ENSCVAP00000014870	BRK	PF07533.16	2.2e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022804	-	12173	XM_015380894	ENSCVAP00000014870	3275 (aa)	XP_015236380	UPI000742B7B3

Gene Model

Click here to download ENSCVAG00000017584's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017584's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017584	chd7	63	66.508	ENSCVAG00000016195	chd9	59	69.194

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017584	chd7	50	66.816	ENSG00000100888	CHD8	86	85.227	Homo_sapiens
ENSCVAG00000017584	chd7	82	85.766	ENSAPOG00000009351	chd7	95	91.566	Acanthochromis_polyacanthus
ENSCVAG00000017584	chd7	50	66.816	ENSAMEG00000006307	CHD8	60	69.146	Ailuropoda_melanoleuca
ENSCVAG00000017584	chd7	69	88.235	ENSACIG00000001590	chd7	94	94.180	Amphilophus_citrinellus
ENSCVAG00000017584	chd7	67	93.668	ENSAOCG00000002337	chd7	93	93.733	Amphiprion_ocellaris
ENSCVAG00000017584	chd7	99	84.898	ENSAPEG00000010332	chd7	98	84.930	Amphiprion_percula
ENSCVAG00000017584	chd7	69	94.737	ENSATEG00000002590	chd7	93	94.826	Anabas_testudineus
ENSCVAG00000017584	chd7	74	79.796	ENSAPLG00000005873	CHD7	73	79.592	Anas_platyrhynchos
ENSCVAG00000017584	chd7	70	79.009	ENSACAG00000005760	CHD7	75	78.728	Anolis_carolinensis
ENSCVAG00000017584	chd7	50	66.816	ENSANAG00000037714	CHD8	69	69.310	Aotus_nancymaae
ENSCVAG00000017584	chd7	51	63.333	ENSACLG00000019692	chd8	70	64.386	Astatotilapia_calliptera
ENSCVAG00000017584	chd7	70	70.817	ENSAMXG00000006180	chd7	95	68.960	Astyanax_mexicanus
ENSCVAG00000017584	chd7	69	79.600	ENSBTAG00000021841	CHD7	74	79.121	Bos_taurus
ENSCVAG00000017584	chd7	50	66.966	ENSBTAG00000020422	CHD8	69	69.310	Bos_taurus
ENSCVAG00000017584	chd7	50	66.891	ENSCJAG00000009002	CHD8	69	69.389	Callithrix_jacchus
ENSCVAG00000017584	chd7	50	66.966	ENSCAFG00000005626	CHD8	72	69.310	Canis_familiaris
ENSCVAG00000017584	chd7	70	79.760	ENSCAFG00000007167	CHD7	66	79.278	Canis_familiaris
ENSCVAG00000017584	chd7	70	78.926	ENSCAFG00020015856	CHD7	66	78.616	Canis_lupus_dingo
ENSCVAG00000017584	chd7	50	66.966	ENSCAFG00020014565	CHD8	82	73.352	Canis_lupus_dingo
ENSCVAG00000017584	chd7	50	66.966	ENSCHIG00000026157	CHD8	61	69.310	Capra_hircus
ENSCVAG00000017584	chd7	69	79.680	ENSCHIG00000011729	CHD7	69	79.199	Capra_hircus
ENSCVAG00000017584	chd7	50	66.418	ENSTSYG00000011939	CHD8	61	68.873	Carlito_syrichta
ENSCVAG00000017584	chd7	50	62.431	ENSCAPG00000016749	CHD8	59	62.948	Cavia_aperea
ENSCVAG00000017584	chd7	50	59.615	ENSCAPG00000007952	CHD7	69	76.220	Cavia_aperea
ENSCVAG00000017584	chd7	68	79.760	ENSCPOG00000013385	CHD7	69	79.513	Cavia_porcellus
ENSCVAG00000017584	chd7	51	66.642	ENSCPOG00000002538	CHD8	60	69.121	Cavia_porcellus
ENSCVAG00000017584	chd7	50	66.891	ENSCCAG00000020467	CHD8	69	69.389	Cebus_capucinus
ENSCVAG00000017584	chd7	50	66.816	ENSCATG00000004861	CHD8	69	69.389	Cercocebus_atys
ENSCVAG00000017584	chd7	50	66.816	ENSCSAG00000016489	CHD8	60	69.310	Chlorocebus_sabaeus
ENSCVAG00000017584	chd7	52	81.141	ENSCHOG00000008478	CHD7	75	79.142	Choloepus_hoffmanni
ENSCVAG00000017584	chd7	81	81.868	ENSCPBG00000021517	CHD7	88	79.929	Chrysemys_picta_bellii
ENSCVAG00000017584	chd7	50	66.891	ENSCANG00000042948	CHD8	69	69.389	Colobus_angolensis_palliatus
ENSCVAG00000017584	chd7	68	79.856	ENSCGRG00001011949	Chd7	66	79.199	Cricetulus_griseus_chok1gshd
ENSCVAG00000017584	chd7	50	66.891	ENSCGRG00001014351	Chd8	60	69.469	Cricetulus_griseus_chok1gshd
ENSCVAG00000017584	chd7	62	74.607	ENSCGRG00000000481	Chd7	66	75.000	Cricetulus_griseus_crigri
ENSCVAG00000017584	chd7	50	66.891	ENSCGRG00000009710	Chd8	62	69.469	Cricetulus_griseus_crigri
ENSCVAG00000017584	chd7	70	83.869	ENSCSEG00000017886	chd7	94	87.317	Cynoglossus_semilaevis
ENSCVAG00000017584	chd7	51	63.014	ENSDARG00000075543	chd8	70	64.252	Danio_rerio
ENSCVAG00000017584	chd7	71	82.586	ENSDARG00000075211	chd7	60	82.655	Danio_rerio
ENSCVAG00000017584	chd7	70	80.080	ENSDNOG00000011674	CHD7	66	79.262	Dasypus_novemcinctus
ENSCVAG00000017584	chd7	54	77.429	ENSETEG00000016689	-	52	78.130	Echinops_telfairi
ENSCVAG00000017584	chd7	50	66.814	ENSEASG00005016258	CHD7	66	79.199	Equus_asinus_asinus
ENSCVAG00000017584	chd7	50	66.891	ENSEASG00005010882	CHD8	69	69.231	Equus_asinus_asinus
ENSCVAG00000017584	chd7	50	66.814	ENSECAG00000001445	CHD7	77	79.121	Equus_caballus
ENSCVAG00000017584	chd7	50	66.891	ENSECAG00000016102	CHD8	62	69.231	Equus_caballus
ENSCVAG00000017584	chd7	78	84.211	ENSEEUG00000013559	CHD7	68	78.531	Erinaceus_europaeus
ENSCVAG00000017584	chd7	84	79.592	ENSELUG00000024442	chd7	68	78.200	Esox_lucius
ENSCVAG00000017584	chd7	50	65.351	ENSFCAG00000003849	CHD7	66	79.456	Felis_catus
ENSCVAG00000017584	chd7	50	66.966	ENSFCAG00000013859	CHD8	63	69.310	Felis_catus
ENSCVAG00000017584	chd7	74	79.717	ENSFALG00000005570	CHD7	69	79.513	Ficedula_albicollis
ENSCVAG00000017584	chd7	50	66.916	ENSFDAG00000011368	CHD8	60	69.572	Fukomys_damarensis
ENSCVAG00000017584	chd7	88	79.679	ENSFDAG00000000528	CHD7	66	79.199	Fukomys_damarensis
ENSCVAG00000017584	chd7	100	91.283	ENSFHEG00000001311	chd7	100	90.950	Fundulus_heteroclitus
ENSCVAG00000017584	chd7	58	85.288	ENSGMOG00000004232	chd7	90	86.316	Gadus_morhua
ENSCVAG00000017584	chd7	73	79.874	ENSGALG00000041080	CHD7	66	79.670	Gallus_gallus
ENSCVAG00000017584	chd7	81	92.173	ENSGAFG00000006858	chd7	96	91.979	Gambusia_affinis
ENSCVAG00000017584	chd7	67	85.310	ENSGACG00000014897	chd7	96	95.385	Gasterosteus_aculeatus
ENSCVAG00000017584	chd7	75	81.115	ENSGAGG00000017996	CHD7	84	79.768	Gopherus_agassizii
ENSCVAG00000017584	chd7	50	66.816	ENSGGOG00000002251	CHD8	69	69.389	Gorilla_gorilla
ENSCVAG00000017584	chd7	50	59.555	ENSHBUG00000002850	chd8	59	63.828	Haplochromis_burtoni
ENSCVAG00000017584	chd7	99	82.855	ENSHBUG00000019225	chd7	98	82.758	Haplochromis_burtoni
ENSCVAG00000017584	chd7	70	79.598	ENSHGLG00000017268	CHD7	66	78.964	Heterocephalus_glaber_female
ENSCVAG00000017584	chd7	68	79.598	ENSHGLG00100015649	CHD7	67	78.964	Heterocephalus_glaber_male
ENSCVAG00000017584	chd7	99	76.970	ENSHCOG00000014380	chd7	95	90.965	Hippocampus_comes
ENSCVAG00000017584	chd7	64	74.354	ENSIPUG00000007585	chd7	84	74.364	Ictalurus_punctatus
ENSCVAG00000017584	chd7	57	66.816	ENSSTOG00000001854	CHD8	60	69.389	Ictidomys_tridecemlineatus
ENSCVAG00000017584	chd7	51	56.842	ENSJJAG00000022064	Chd7	69	79.042	Jaculus_jaculus
ENSCVAG00000017584	chd7	50	66.393	ENSJJAG00000000408	Chd8	59	69.146	Jaculus_jaculus
ENSCVAG00000017584	chd7	99	87.040	ENSKMAG00000009724	chd7	98	86.160	Kryptolebias_marmoratus
ENSCVAG00000017584	chd7	99	80.321	ENSLBEG00000020842	chd7	98	80.282	Labrus_bergylta
ENSCVAG00000017584	chd7	62	80.593	ENSLACG00000002461	CHD7	67	79.638	Latimeria_chalumnae
ENSCVAG00000017584	chd7	66	81.481	ENSLOCG00000005062	chd7	69	82.297	Lepisosteus_oculatus
ENSCVAG00000017584	chd7	68	79.520	ENSMFAG00000041825	CHD7	78	79.042	Macaca_fascicularis
ENSCVAG00000017584	chd7	50	66.816	ENSMFAG00000035402	CHD8	69	69.389	Macaca_fascicularis
ENSCVAG00000017584	chd7	50	66.816	ENSMMUG00000015002	CHD8	69	69.389	Macaca_mulatta
ENSCVAG00000017584	chd7	50	66.816	ENSMNEG00000031076	CHD8	69	69.389	Macaca_nemestrina
ENSCVAG00000017584	chd7	50	66.816	ENSMLEG00000035911	CHD8	69	69.389	Mandrillus_leucophaeus
ENSCVAG00000017584	chd7	99	81.294	ENSMAMG00000011569	chd7	98	80.404	Mastacembelus_armatus
ENSCVAG00000017584	chd7	50	59.972	ENSMZEG00005012027	chd8	59	64.331	Maylandia_zebra
ENSCVAG00000017584	chd7	99	82.824	ENSMZEG00005010646	chd7	98	82.758	Maylandia_zebra
ENSCVAG00000017584	chd7	74	79.717	ENSMGAG00000011092	CHD7	66	79.513	Meleagris_gallopavo
ENSCVAG00000017584	chd7	84	79.983	ENSMAUG00000001000	Chd7	64	81.890	Mesocricetus_auratus
ENSCVAG00000017584	chd7	50	66.891	ENSMICG00000007735	CHD8	69	69.389	Microcebus_murinus
ENSCVAG00000017584	chd7	68	79.776	ENSMOCG00000011408	Chd7	66	79.042	Microtus_ochrogaster
ENSCVAG00000017584	chd7	72	79.937	ENSMODG00000008488	CHD7	66	79.733	Monodelphis_domestica
ENSCVAG00000017584	chd7	74	83.061	ENSMALG00000004389	chd7	98	85.031	Monopterus_albus
ENSCVAG00000017584	chd7	87	79.696	MGP_CAROLIEiJ_G0025797	Chd7	66	78.964	Mus_caroli
ENSCVAG00000017584	chd7	50	66.966	MGP_CAROLIEiJ_G0019237	Chd8	64	69.548	Mus_caroli
ENSCVAG00000017584	chd7	87	79.696	ENSMUSG00000041235	Chd7	66	78.964	Mus_musculus
ENSCVAG00000017584	chd7	50	66.966	ENSMUSG00000053754	Chd8	73	63.297	Mus_musculus
ENSCVAG00000017584	chd7	88	79.616	MGP_PahariEiJ_G0023920	Chd7	66	78.885	Mus_pahari
ENSCVAG00000017584	chd7	87	79.776	MGP_SPRETEiJ_G0026745	Chd7	66	79.042	Mus_spretus
ENSCVAG00000017584	chd7	50	66.966	ENSMPUG00000000174	CHD8	61	69.310	Mustela_putorius_furo
ENSCVAG00000017584	chd7	58	79.680	ENSMPUG00000002338	CHD7	74	79.199	Mustela_putorius_furo
ENSCVAG00000017584	chd7	67	78.254	ENSMLUG00000015266	CHD7	72	76.688	Myotis_lucifugus
ENSCVAG00000017584	chd7	50	67.041	ENSMLUG00000001878	CHD8	61	69.389	Myotis_lucifugus
ENSCVAG00000017584	chd7	93	61.265	ENSNGAG00000010767	Chd7	66	78.807	Nannospalax_galili
ENSCVAG00000017584	chd7	50	66.891	ENSNGAG00000022658	Chd8	57	69.469	Nannospalax_galili
ENSCVAG00000017584	chd7	74	79.879	ENSNBRG00000001280	chd7	64	86.418	Neolamprologus_brichardi
ENSCVAG00000017584	chd7	50	60.252	ENSNBRG00000017428	chd8	59	64.488	Neolamprologus_brichardi
ENSCVAG00000017584	chd7	51	61.498	ENSMEUG00000011732	CHD8	61	64.198	Notamacropus_eugenii
ENSCVAG00000017584	chd7	69	74.965	ENSMEUG00000010045	CHD7	59	74.402	Notamacropus_eugenii
ENSCVAG00000017584	chd7	51	63.793	ENSOPRG00000016120	CHD8	67	66.032	Ochotona_princeps
ENSCVAG00000017584	chd7	50	88.785	ENSOPRG00000004404	-	53	88.785	Ochotona_princeps
ENSCVAG00000017584	chd7	50	66.841	ENSODEG00000001047	CHD8	64	69.414	Octodon_degus
ENSCVAG00000017584	chd7	76	81.418	ENSONIG00000016614	chd7	73	83.420	Oreochromis_niloticus
ENSCVAG00000017584	chd7	51	63.333	ENSONIG00000015569	chd8	61	64.858	Oreochromis_niloticus
ENSCVAG00000017584	chd7	70	79.840	ENSOCUG00000010034	CHD7	82	79.278	Oryctolagus_cuniculus
ENSCVAG00000017584	chd7	99	82.844	ENSORLG00000013492	chd7	98	82.202	Oryzias_latipes
ENSCVAG00000017584	chd7	98	82.727	ENSORLG00020020002	chd7	98	82.162	Oryzias_latipes_hni
ENSCVAG00000017584	chd7	98	82.813	ENSORLG00015020858	chd7	98	82.218	Oryzias_latipes_hsok
ENSCVAG00000017584	chd7	98	82.849	ENSOMEG00000016881	chd7	98	82.315	Oryzias_melastigma
ENSCVAG00000017584	chd7	50	66.891	ENSOGAG00000002722	CHD8	59	69.389	Otolemur_garnettii
ENSCVAG00000017584	chd7	69	74.683	ENSOARG00000016176	CHD7	69	78.964	Ovis_aries
ENSCVAG00000017584	chd7	50	66.916	ENSOARG00000019643	CHD8	60	69.255	Ovis_aries
ENSCVAG00000017584	chd7	53	66.418	ENSPPAG00000039987	CHD8	61	68.952	Pan_paniscus
ENSCVAG00000017584	chd7	50	66.966	ENSPPRG00000006591	CHD8	69	69.310	Panthera_pardus
ENSCVAG00000017584	chd7	69	79.680	ENSPPRG00000022248	CHD7	66	78.947	Panthera_pardus
ENSCVAG00000017584	chd7	50	66.966	ENSPTIG00000021989	CHD8	69	69.310	Panthera_tigris_altaica
ENSCVAG00000017584	chd7	69	78.577	ENSPTIG00000011702	CHD7	69	78.417	Panthera_tigris_altaica
ENSCVAG00000017584	chd7	50	66.742	ENSPTRG00000006124	CHD8	69	69.310	Pan_troglodytes
ENSCVAG00000017584	chd7	50	66.816	ENSPANG00000011742	CHD8	69	69.389	Papio_anubis
ENSCVAG00000017584	chd7	50	72.727	ENSPKIG00000009142	chd8	58	72.727	Paramormyrops_kingsleyae
ENSCVAG00000017584	chd7	71	79.984	ENSPSIG00000012003	CHD7	66	79.419	Pelodiscus_sinensis
ENSCVAG00000017584	chd7	73	77.170	ENSPMGG00000018543	chd7	66	85.771	Periophthalmus_magnuspinnatus
ENSCVAG00000017584	chd7	50	66.891	ENSPEMG00000022977	Chd8	60	69.469	Peromyscus_maniculatus_bairdii
ENSCVAG00000017584	chd7	69	80.814	ENSPEMG00000023028	Chd7	67	78.475	Peromyscus_maniculatus_bairdii
ENSCVAG00000017584	chd7	50	66.641	ENSPCIG00000020931	CHD8	67	74.011	Phascolarctos_cinereus
ENSCVAG00000017584	chd7	65	81.214	ENSPCIG00000000025	-	72	79.830	Phascolarctos_cinereus
ENSCVAG00000017584	chd7	58	64.975	ENSPFOG00000010939	-	87	65.094	Poecilia_formosa
ENSCVAG00000017584	chd7	100	91.198	ENSPFOG00000004891	chd7	99	98.701	Poecilia_formosa
ENSCVAG00000017584	chd7	100	90.928	ENSPLAG00000023322	chd7	100	90.414	Poecilia_latipinna
ENSCVAG00000017584	chd7	77	81.324	ENSPMEG00000005879	chd7	99	81.324	Poecilia_mexicana
ENSCVAG00000017584	chd7	50	66.816	ENSPPYG00000005596	CHD8	60	69.389	Pongo_abelii
ENSCVAG00000017584	chd7	78	76.404	ENSPCAG00000000227	CHD7	64	75.610	Procavia_capensis
ENSCVAG00000017584	chd7	50	65.746	ENSPCOG00000014628	CHD8	61	68.476	Propithecus_coquereli
ENSCVAG00000017584	chd7	64	82.481	ENSPVAG00000011873	CHD7	64	82.386	Pteropus_vampyrus
ENSCVAG00000017584	chd7	50	66.966	ENSPVAG00000000272	CHD8	65	69.365	Pteropus_vampyrus
ENSCVAG00000017584	chd7	72	87.118	ENSPNYG00000012490	chd7	96	87.159	Pundamilia_nyererei
ENSCVAG00000017584	chd7	50	59.805	ENSPNYG00000018020	chd8	60	63.551	Pundamilia_nyererei
ENSCVAG00000017584	chd7	61	77.074	ENSPNAG00000011245	chd7	59	77.445	Pygocentrus_nattereri
ENSCVAG00000017584	chd7	91	76.836	ENSRNOG00000006689	Chd7	66	79.278	Rattus_norvegicus
ENSCVAG00000017584	chd7	50	66.816	ENSRNOG00000025011	Chd8	60	69.389	Rattus_norvegicus
ENSCVAG00000017584	chd7	50	62.983	ENSRBIG00000039239	CHD8	67	64.393	Rhinopithecus_bieti
ENSCVAG00000017584	chd7	50	66.816	ENSRROG00000044285	CHD8	69	69.389	Rhinopithecus_roxellana
ENSCVAG00000017584	chd7	51	66.891	ENSSBOG00000023442	CHD8	63	69.389	Saimiri_boliviensis_boliviensis
ENSCVAG00000017584	chd7	70	79.858	ENSSHAG00000011522	CHD7	66	79.827	Sarcophilus_harrisii
ENSCVAG00000017584	chd7	51	66.442	ENSSHAG00000008118	CHD8	54	69.072	Sarcophilus_harrisii
ENSCVAG00000017584	chd7	82	84.132	ENSSFOG00015015077	chd7	90	83.388	Scleropages_formosus
ENSCVAG00000017584	chd7	99	82.099	ENSSDUG00000013773	chd7	98	81.675	Seriola_dumerili
ENSCVAG00000017584	chd7	50	60.042	ENSSDUG00000012439	chd8	60	64.179	Seriola_dumerili
ENSCVAG00000017584	chd7	51	63.333	ENSSLDG00000001679	chd8	60	64.549	Seriola_lalandi_dorsalis
ENSCVAG00000017584	chd7	63	80.077	ENSSARG00000003387	CHD7	65	82.857	Sorex_araneus
ENSCVAG00000017584	chd7	83	77.621	ENSSPUG00000009235	CHD7	76	77.344	Sphenodon_punctatus
ENSCVAG00000017584	chd7	76	86.822	ENSSPAG00000006320	chd7	96	86.889	Stegastes_partitus
ENSCVAG00000017584	chd7	69	79.600	ENSSSCG00000006231	CHD7	70	79.121	Sus_scrofa
ENSCVAG00000017584	chd7	50	66.966	ENSSSCG00000002127	CHD8	67	69.310	Sus_scrofa
ENSCVAG00000017584	chd7	73	79.840	ENSTGUG00000011196	CHD7	69	79.356	Taeniopygia_guttata
ENSCVAG00000017584	chd7	68	79.805	ENSTRUG00000008632	chd7	98	80.417	Takifugu_rubripes
ENSCVAG00000017584	chd7	68	97.778	ENSTNIG00000002647	chd7	98	90.580	Tetraodon_nigroviridis
ENSCVAG00000017584	chd7	65	77.879	ENSTTRG00000004221	CHD7	66	77.285	Tursiops_truncatus
ENSCVAG00000017584	chd7	68	76.777	ENSUAMG00000025734	CHD7	80	76.340	Ursus_americanus
ENSCVAG00000017584	chd7	50	66.966	ENSUMAG00000004045	CHD8	70	72.990	Ursus_maritimus
ENSCVAG00000017584	chd7	75	75.682	ENSUMAG00000010436	CHD7	87	77.167	Ursus_maritimus
ENSCVAG00000017584	chd7	70	79.760	ENSVVUG00000018063	CHD7	66	79.199	Vulpes_vulpes
ENSCVAG00000017584	chd7	50	66.966	ENSVVUG00000009444	CHD8	64	69.310	Vulpes_vulpes
ENSCVAG00000017584	chd7	71	79.232	ENSXETG00000026004	chd8	71	79.340	Xenopus_tropicalis
ENSCVAG00000017584	chd7	100	91.472	ENSXMAG00000018590	chd7	100	90.956	Xiphophorus_maculatus