EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017631 (Gene tree)
Gene ID: 107104631
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 18103 bases
Position: chrKL654326.1:19773-37875
Accession: 107104631
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000014832	ResIII	PF04851.15	4.6e-16	1	1
ENSCVAP00000014832	DEAD	PF00270.29	4.4e-34	1	2
ENSCVAP00000014832	DEAD	PF00270.29	4.4e-34	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000022754	-	6171	XM_015404671	ENSCVAP00000014832	2056 (aa)	XP_015260157	-

Gene Model

Click here to download ENSCVAG00000017631's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017631's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017631	snrnp200	97	36.835	ENSCVAG00000013014	ascc3	89	39.115

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017631	snrnp200	99	85.627	ENSG00000144028	SNRNP200	97	89.850	Homo_sapiens
ENSCVAG00000017631	snrnp200	100	92.135	ENSAPOG00000010223	snrnp200	100	92.135	Acanthochromis_polyacanthus
ENSCVAG00000017631	snrnp200	99	85.674	ENSAMEG00000008996	SNRNP200	100	85.674	Ailuropoda_melanoleuca
ENSCVAG00000017631	snrnp200	97	90.890	ENSACIG00000001764	snrnp200	98	90.890	Amphilophus_citrinellus
ENSCVAG00000017631	snrnp200	100	91.901	ENSAOCG00000024593	snrnp200	100	91.901	Amphiprion_ocellaris
ENSCVAG00000017631	snrnp200	97	90.997	ENSAPEG00000012554	snrnp200	100	90.997	Amphiprion_percula
ENSCVAG00000017631	snrnp200	100	91.948	ENSATEG00000022522	snrnp200	100	91.948	Anabas_testudineus
ENSCVAG00000017631	snrnp200	99	85.667	ENSAPLG00000004313	SNRNP200	100	85.667	Anas_platyrhynchos
ENSCVAG00000017631	snrnp200	99	83.702	ENSACAG00000000434	SNRNP200	100	83.702	Anolis_carolinensis
ENSCVAG00000017631	snrnp200	99	82.158	ENSANAG00000036625	SNRNP200	100	81.971	Aotus_nancymaae
ENSCVAG00000017631	snrnp200	100	91.386	ENSACLG00000011188	snrnp200	100	91.386	Astatotilapia_calliptera
ENSCVAG00000017631	snrnp200	99	89.234	ENSAMXG00000005684	snrnp200	100	89.232	Astyanax_mexicanus
ENSCVAG00000017631	snrnp200	99	85.440	ENSBTAG00000000848	SNRNP200	100	85.440	Bos_taurus
ENSCVAG00000017631	snrnp200	99	85.627	ENSCJAG00000007514	SNRNP200	100	85.627	Callithrix_jacchus
ENSCVAG00000017631	snrnp200	99	86.804	ENSCAFG00020019979	SNRNP200	100	86.804	Canis_lupus_dingo
ENSCVAG00000017631	snrnp200	99	85.393	ENSCHIG00000020611	SNRNP200	100	85.393	Capra_hircus
ENSCVAG00000017631	snrnp200	99	85.674	ENSTSYG00000010467	SNRNP200	100	85.674	Carlito_syrichta
ENSCVAG00000017631	snrnp200	99	85.190	ENSCAPG00000017234	SNRNP200	99	85.190	Cavia_aperea
ENSCVAG00000017631	snrnp200	99	85.487	ENSCPOG00000006776	SNRNP200	100	85.487	Cavia_porcellus
ENSCVAG00000017631	snrnp200	99	85.627	ENSCCAG00000033962	SNRNP200	100	85.627	Cebus_capucinus
ENSCVAG00000017631	snrnp200	99	85.627	ENSCATG00000015790	SNRNP200	100	85.627	Cercocebus_atys
ENSCVAG00000017631	snrnp200	99	85.534	ENSCLAG00000004116	SNRNP200	100	85.534	Chinchilla_lanigera
ENSCVAG00000017631	snrnp200	99	85.627	ENSCSAG00000017369	SNRNP200	100	85.627	Chlorocebus_sabaeus
ENSCVAG00000017631	snrnp200	75	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSCVAG00000017631	snrnp200	99	87.908	ENSCPBG00000022571	SNRNP200	99	89.362	Chrysemys_picta_bellii
ENSCVAG00000017631	snrnp200	99	71.742	ENSCING00000005082	-	99	71.836	Ciona_intestinalis
ENSCVAG00000017631	snrnp200	99	80.290	ENSCANG00000033932	SNRNP200	100	85.067	Colobus_angolensis_palliatus
ENSCVAG00000017631	snrnp200	99	85.627	ENSCGRG00001022610	Snrnp200	100	85.627	Cricetulus_griseus_chok1gshd
ENSCVAG00000017631	snrnp200	99	85.133	ENSCGRG00000016472	Snrnp200	100	85.133	Cricetulus_griseus_crigri
ENSCVAG00000017631	snrnp200	99	92.216	ENSCSEG00000016399	snrnp200	100	92.216	Cynoglossus_semilaevis
ENSCVAG00000017631	snrnp200	100	89.232	ENSDARG00000077536	snrnp200	100	89.232	Danio_rerio
ENSCVAG00000017631	snrnp200	99	84.363	ENSDNOG00000011227	SNRNP200	100	84.363	Dasypus_novemcinctus
ENSCVAG00000017631	snrnp200	99	83.131	ENSDORG00000005861	Snrnp200	100	83.131	Dipodomys_ordii
ENSCVAG00000017631	snrnp200	100	69.800	FBgn0263599	l(3)72Ab	100	69.893	Drosophila_melanogaster
ENSCVAG00000017631	snrnp200	95	87.765	ENSETEG00000000162	SNRNP200	74	87.765	Echinops_telfairi
ENSCVAG00000017631	snrnp200	82	76.585	ENSEBUG00000016524	snrnp200	99	74.618	Eptatretus_burgeri
ENSCVAG00000017631	snrnp200	99	84.662	ENSEASG00005001884	SNRNP200	100	84.569	Equus_asinus_asinus
ENSCVAG00000017631	snrnp200	99	87.812	ENSECAG00000019675	SNRNP200	100	87.812	Equus_caballus
ENSCVAG00000017631	snrnp200	91	96.970	ENSEEUG00000012178	SNRNP200	93	96.970	Erinaceus_europaeus
ENSCVAG00000017631	snrnp200	100	90.360	ENSELUG00000018948	snrnp200	100	90.360	Esox_lucius
ENSCVAG00000017631	snrnp200	99	87.860	ENSFCAG00000010699	SNRNP200	100	87.860	Felis_catus
ENSCVAG00000017631	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSCVAG00000017631	snrnp200	99	85.440	ENSFDAG00000004683	SNRNP200	100	85.440	Fukomys_damarensis
ENSCVAG00000017631	snrnp200	100	95.729	ENSFHEG00000003786	snrnp200	100	95.729	Fundulus_heteroclitus
ENSCVAG00000017631	snrnp200	100	89.439	ENSGMOG00000004881	snrnp200	99	89.299	Gadus_morhua
ENSCVAG00000017631	snrnp200	100	95.585	ENSGAFG00000010807	snrnp200	100	95.585	Gambusia_affinis
ENSCVAG00000017631	snrnp200	100	91.453	ENSGACG00000011474	snrnp200	99	91.453	Gasterosteus_aculeatus
ENSCVAG00000017631	snrnp200	95	92.369	ENSGAGG00000016069	SNRNP200	98	96.774	Gopherus_agassizii
ENSCVAG00000017631	snrnp200	99	85.627	ENSGGOG00000005174	SNRNP200	97	91.275	Gorilla_gorilla
ENSCVAG00000017631	snrnp200	97	88.355	ENSHBUG00000011322	snrnp200	99	88.355	Haplochromis_burtoni
ENSCVAG00000017631	snrnp200	99	85.487	ENSHGLG00000006654	SNRNP200	100	85.487	Heterocephalus_glaber_female
ENSCVAG00000017631	snrnp200	99	85.487	ENSHGLG00100018594	SNRNP200	100	85.487	Heterocephalus_glaber_male
ENSCVAG00000017631	snrnp200	99	85.674	ENSSTOG00000016351	SNRNP200	100	85.674	Ictidomys_tridecemlineatus
ENSCVAG00000017631	snrnp200	99	85.440	ENSJJAG00000023659	Snrnp200	100	85.440	Jaculus_jaculus
ENSCVAG00000017631	snrnp200	100	94.261	ENSKMAG00000003665	snrnp200	100	94.261	Kryptolebias_marmoratus
ENSCVAG00000017631	snrnp200	100	91.667	ENSLBEG00000021585	snrnp200	100	91.667	Labrus_bergylta
ENSCVAG00000017631	snrnp200	81	85.845	ENSLACG00000000226	SNRNP200	100	85.845	Latimeria_chalumnae
ENSCVAG00000017631	snrnp200	100	88.541	ENSLOCG00000015198	snrnp200	100	88.541	Lepisosteus_oculatus
ENSCVAG00000017631	snrnp200	99	85.487	ENSLAFG00000015626	SNRNP200	100	85.487	Loxodonta_africana
ENSCVAG00000017631	snrnp200	99	85.581	ENSMFAG00000040174	SNRNP200	98	91.275	Macaca_fascicularis
ENSCVAG00000017631	snrnp200	99	85.581	ENSMMUG00000023261	SNRNP200	100	85.581	Macaca_mulatta
ENSCVAG00000017631	snrnp200	99	85.534	ENSMNEG00000032398	SNRNP200	100	85.534	Macaca_nemestrina
ENSCVAG00000017631	snrnp200	99	85.627	ENSMLEG00000019083	SNRNP200	98	91.275	Mandrillus_leucophaeus
ENSCVAG00000017631	snrnp200	100	91.847	ENSMAMG00000007851	snrnp200	100	91.703	Mastacembelus_armatus
ENSCVAG00000017631	snrnp200	97	88.355	ENSMZEG00005010787	snrnp200	99	88.355	Maylandia_zebra
ENSCVAG00000017631	snrnp200	97	85.286	ENSMGAG00000001831	SNRNP200	99	85.270	Meleagris_gallopavo
ENSCVAG00000017631	snrnp200	99	85.674	ENSMAUG00000011825	Snrnp200	100	85.674	Mesocricetus_auratus
ENSCVAG00000017631	snrnp200	99	85.674	ENSMICG00000004710	SNRNP200	100	85.674	Microcebus_murinus
ENSCVAG00000017631	snrnp200	99	83.848	ENSMOCG00000011814	Snrnp200	100	83.848	Microtus_ochrogaster
ENSCVAG00000017631	snrnp200	100	89.466	ENSMMOG00000014167	snrnp200	100	89.466	Mola_mola
ENSCVAG00000017631	snrnp200	99	85.861	ENSMODG00000008475	SNRNP200	100	85.861	Monodelphis_domestica
ENSCVAG00000017631	snrnp200	100	91.713	ENSMALG00000001973	snrnp200	100	91.713	Monopterus_albus
ENSCVAG00000017631	snrnp200	99	85.534	MGP_CAROLIEiJ_G0024250	Snrnp200	100	85.534	Mus_caroli
ENSCVAG00000017631	snrnp200	99	85.581	ENSMUSG00000003660	Snrnp200	100	85.581	Mus_musculus
ENSCVAG00000017631	snrnp200	99	85.581	MGP_PahariEiJ_G0025695	Snrnp200	100	85.581	Mus_pahari
ENSCVAG00000017631	snrnp200	97	91.436	MGP_SPRETEiJ_G0025170	Snrnp200	100	91.436	Mus_spretus
ENSCVAG00000017631	snrnp200	99	85.721	ENSMPUG00000008949	SNRNP200	100	85.721	Mustela_putorius_furo
ENSCVAG00000017631	snrnp200	99	85.227	ENSMLUG00000010493	SNRNP200	100	85.227	Myotis_lucifugus
ENSCVAG00000017631	snrnp200	99	82.491	ENSMLUG00000027511	-	100	82.491	Myotis_lucifugus
ENSCVAG00000017631	snrnp200	99	85.627	ENSNGAG00000021993	Snrnp200	100	85.627	Nannospalax_galili
ENSCVAG00000017631	snrnp200	90	90.424	ENSNBRG00000017960	snrnp200	98	90.424	Neolamprologus_brichardi
ENSCVAG00000017631	snrnp200	99	81.358	ENSNLEG00000000025	SNRNP200	100	81.404	Nomascus_leucogenys
ENSCVAG00000017631	snrnp200	99	93.814	ENSMEUG00000010532	SNRNP200	79	90.476	Notamacropus_eugenii
ENSCVAG00000017631	snrnp200	96	84.339	ENSOPRG00000015464	SNRNP200	100	82.303	Ochotona_princeps
ENSCVAG00000017631	snrnp200	99	85.487	ENSODEG00000008366	SNRNP200	100	85.487	Octodon_degus
ENSCVAG00000017631	snrnp200	100	91.479	ENSONIG00000010714	snrnp200	100	91.479	Oreochromis_niloticus
ENSCVAG00000017631	snrnp200	99	85.581	ENSOCUG00000009864	SNRNP200	100	85.581	Oryctolagus_cuniculus
ENSCVAG00000017631	snrnp200	99	91.237	ENSORLG00000012286	snrnp200	100	91.237	Oryzias_latipes
ENSCVAG00000017631	snrnp200	99	91.237	ENSORLG00020004648	snrnp200	100	91.237	Oryzias_latipes_hni
ENSCVAG00000017631	snrnp200	99	91.143	ENSORLG00015019114	snrnp200	100	91.143	Oryzias_latipes_hsok
ENSCVAG00000017631	snrnp200	100	91.526	ENSOMEG00000011834	snrnp200	100	91.526	Oryzias_melastigma
ENSCVAG00000017631	snrnp200	99	85.674	ENSOGAG00000006879	SNRNP200	100	85.674	Otolemur_garnettii
ENSCVAG00000017631	snrnp200	99	84.792	ENSOARG00000013949	SNRNP200	100	84.792	Ovis_aries
ENSCVAG00000017631	snrnp200	99	85.627	ENSPPAG00000041559	SNRNP200	100	85.627	Pan_paniscus
ENSCVAG00000017631	snrnp200	99	85.721	ENSPPRG00000004435	SNRNP200	100	85.721	Panthera_pardus
ENSCVAG00000017631	snrnp200	99	85.300	ENSPTIG00000006380	SNRNP200	100	85.300	Panthera_tigris_altaica
ENSCVAG00000017631	snrnp200	99	85.627	ENSPTRG00000012230	SNRNP200	100	85.627	Pan_troglodytes
ENSCVAG00000017631	snrnp200	99	85.581	ENSPANG00000006017	SNRNP200	100	85.581	Papio_anubis
ENSCVAG00000017631	snrnp200	100	91.894	ENSPKIG00000014762	snrnp200	100	91.894	Paramormyrops_kingsleyae
ENSCVAG00000017631	snrnp200	99	84.932	ENSPSIG00000008580	SNRNP200	100	84.932	Pelodiscus_sinensis
ENSCVAG00000017631	snrnp200	99	85.768	ENSPCIG00000023050	SNRNP200	100	85.768	Phascolarctos_cinereus
ENSCVAG00000017631	snrnp200	100	93.215	ENSPFOG00000015110	snrnp200	100	93.215	Poecilia_formosa
ENSCVAG00000017631	snrnp200	97	92.574	ENSPLAG00000006711	snrnp200	99	92.574	Poecilia_latipinna
ENSCVAG00000017631	snrnp200	97	92.629	ENSPMEG00000021166	snrnp200	99	92.629	Poecilia_mexicana
ENSCVAG00000017631	snrnp200	100	95.489	ENSPREG00000008875	snrnp200	100	95.489	Poecilia_reticulata
ENSCVAG00000017631	snrnp200	99	85.627	ENSPPYG00000012068	SNRNP200	100	85.627	Pongo_abelii
ENSCVAG00000017631	snrnp200	96	95.513	ENSPCAG00000008536	SNRNP200	86	97.872	Procavia_capensis
ENSCVAG00000017631	snrnp200	99	85.627	ENSPCOG00000024608	SNRNP200	100	85.627	Propithecus_coquereli
ENSCVAG00000017631	snrnp200	95	88.095	ENSPVAG00000005860	SNRNP200	92	88.095	Pteropus_vampyrus
ENSCVAG00000017631	snrnp200	99	91.254	ENSPNYG00000017476	snrnp200	100	91.244	Pundamilia_nyererei
ENSCVAG00000017631	snrnp200	100	89.592	ENSPNAG00000010998	snrnp200	100	89.592	Pygocentrus_nattereri
ENSCVAG00000017631	snrnp200	99	85.674	ENSRNOG00000012157	Snrnp200	100	85.674	Rattus_norvegicus
ENSCVAG00000017631	snrnp200	99	85.627	ENSRBIG00000044690	-	100	85.627	Rhinopithecus_bieti
ENSCVAG00000017631	snrnp200	99	85.627	ENSRROG00000037952	-	100	85.627	Rhinopithecus_roxellana
ENSCVAG00000017631	snrnp200	99	85.627	ENSSBOG00000035471	SNRNP200	96	91.275	Saimiri_boliviensis_boliviensis
ENSCVAG00000017631	snrnp200	97	85.486	ENSSHAG00000000758	SNRNP200	99	85.471	Sarcophilus_harrisii
ENSCVAG00000017631	snrnp200	100	89.658	ENSSFOG00015018826	snrnp200	100	89.658	Scleropages_formosus
ENSCVAG00000017631	snrnp200	100	91.433	ENSSMAG00000005463	snrnp200	100	91.433	Scophthalmus_maximus
ENSCVAG00000017631	snrnp200	100	92.135	ENSSDUG00000021410	snrnp200	100	92.135	Seriola_dumerili
ENSCVAG00000017631	snrnp200	100	91.948	ENSSLDG00000010884	snrnp200	100	91.948	Seriola_lalandi_dorsalis
ENSCVAG00000017631	snrnp200	95	90.189	ENSSARG00000010728	SNRNP200	93	90.189	Sorex_araneus
ENSCVAG00000017631	snrnp200	99	85.955	ENSSPUG00000003726	-	100	85.955	Sphenodon_punctatus
ENSCVAG00000017631	snrnp200	100	92.135	ENSSPAG00000001842	snrnp200	100	92.135	Stegastes_partitus
ENSCVAG00000017631	snrnp200	99	85.768	ENSSSCG00000008127	SNRNP200	100	85.768	Sus_scrofa
ENSCVAG00000017631	snrnp200	99	75.951	ENSTGUG00000014475	-	100	75.767	Taeniopygia_guttata
ENSCVAG00000017631	snrnp200	100	90.871	ENSTRUG00000001307	snrnp200	100	90.871	Takifugu_rubripes
ENSCVAG00000017631	snrnp200	99	82.247	ENSTNIG00000004320	snrnp200	100	82.247	Tetraodon_nigroviridis
ENSCVAG00000017631	snrnp200	76	92.958	ENSTBEG00000003329	-	67	92.958	Tupaia_belangeri
ENSCVAG00000017631	snrnp200	99	85.487	ENSTTRG00000004983	SNRNP200	100	85.487	Tursiops_truncatus
ENSCVAG00000017631	snrnp200	74	78.488	ENSUAMG00000008395	-	95	78.488	Ursus_americanus
ENSCVAG00000017631	snrnp200	99	85.721	ENSUMAG00000012385	SNRNP200	100	85.721	Ursus_maritimus
ENSCVAG00000017631	snrnp200	87	94.643	ENSVPAG00000006434	SNRNP200	66	94.643	Vicugna_pacos
ENSCVAG00000017631	snrnp200	99	87.860	ENSVVUG00000026247	SNRNP200	100	87.860	Vulpes_vulpes
ENSCVAG00000017631	snrnp200	99	85.781	ENSXETG00000001243	snrnp200	100	85.781	Xenopus_tropicalis
ENSCVAG00000017631	snrnp200	97	92.765	ENSXMAG00000002058	snrnp200	98	92.765	Xiphophorus_maculatus