EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000017765 (Gene tree)
Gene ID: 107080665
Gene Symbol: vars2
Alias: si:ch211-152p11.2
Full Name: valine--tRNA ligase%2C mitochondrial-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 23967 bases
Position: chrKL654698.1:15412-39378
Accession: 107080665
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000029746	tRNA-synt_1g	PF09334.11	1.8e-07	1	1
ENSCVAP00000029746	Anticodon_1	PF08264.13	7.5e-36	1	1
ENSCVAP00000029746	tRNA-synt_1	PF00133.22	1.1e-122	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031354	-	2682	XM_015368872	ENSCVAP00000029746	722 (aa)	XP_015224358	-

Gene Model

Click here to download ENSCVAG00000017765's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017765's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000017765	vars2	98	48.034	ENSCVAG00000022398	vars	55	48.034

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017765	vars2	98	80.226	ENSAPOG00000007396	vars2	65	80.226	Acanthochromis_polyacanthus
ENSCVAG00000017765	vars2	98	53.182	ENSAMEG00000012997	VARS2	63	53.182	Ailuropoda_melanoleuca
ENSCVAG00000017765	vars2	98	79.887	ENSACIG00000004344	vars2	66	79.887	Amphilophus_citrinellus
ENSCVAG00000017765	vars2	98	80.932	ENSAOCG00000000476	vars2	65	80.932	Amphiprion_ocellaris
ENSCVAG00000017765	vars2	98	80.932	ENSAPEG00000008646	vars2	64	80.932	Amphiprion_percula
ENSCVAG00000017765	vars2	98	81.215	ENSATEG00000012291	vars2	65	81.215	Anabas_testudineus
ENSCVAG00000017765	vars2	97	53.191	ENSACAG00000022093	VARS2	63	53.191	Anolis_carolinensis
ENSCVAG00000017765	vars2	94	52.872	ENSANAG00000038018	VARS2	63	52.872	Aotus_nancymaae
ENSCVAG00000017765	vars2	98	79.014	ENSACLG00000018673	vars2	66	79.014	Astatotilapia_calliptera
ENSCVAG00000017765	vars2	99	71.688	ENSAMXG00000017773	vars2	70	71.688	Astyanax_mexicanus
ENSCVAG00000017765	vars2	98	52.192	ENSBTAG00000010698	VARS2	64	52.192	Bos_taurus
ENSCVAG00000017765	vars2	94	52.725	ENSCJAG00000019826	VARS2	63	52.872	Callithrix_jacchus
ENSCVAG00000017765	vars2	99	52.646	ENSCAFG00000000454	VARS2	66	52.646	Canis_familiaris
ENSCVAG00000017765	vars2	88	56.378	ENSCAFG00020019387	VARS2	64	56.270	Canis_lupus_dingo
ENSCVAG00000017765	vars2	94	53.166	ENSCHIG00000007847	VARS2	63	53.166	Capra_hircus
ENSCVAG00000017765	vars2	94	53.903	ENSTSYG00000009904	VARS2	63	53.903	Carlito_syrichta
ENSCVAG00000017765	vars2	94	53.166	ENSCAPG00000017770	VARS2	71	53.166	Cavia_aperea
ENSCVAG00000017765	vars2	94	52.872	ENSCPOG00000021834	VARS2	63	53.019	Cavia_porcellus
ENSCVAG00000017765	vars2	98	51.485	ENSCCAG00000037907	VARS2	61	55.927	Cebus_capucinus
ENSCVAG00000017765	vars2	94	53.314	ENSCATG00000032554	VARS2	63	53.461	Cercocebus_atys
ENSCVAG00000017765	vars2	94	52.577	ENSCLAG00000002889	VARS2	63	52.577	Chinchilla_lanigera
ENSCVAG00000017765	vars2	94	53.461	ENSCSAG00000008327	VARS2	63	53.608	Chlorocebus_sabaeus
ENSCVAG00000017765	vars2	98	54.379	ENSCPBG00000021502	VARS2	68	54.379	Chrysemys_picta_bellii
ENSCVAG00000017765	vars2	94	52.725	ENSCANG00000014991	VARS2	62	52.872	Colobus_angolensis_palliatus
ENSCVAG00000017765	vars2	98	51.554	ENSCGRG00001021535	Vars2	65	51.554	Cricetulus_griseus_chok1gshd
ENSCVAG00000017765	vars2	98	51.554	ENSCGRG00000014112	Vars2	65	51.554	Cricetulus_griseus_crigri
ENSCVAG00000017765	vars2	99	59.524	ENSCSEG00000015432	vars2	51	85.235	Cynoglossus_semilaevis
ENSCVAG00000017765	vars2	97	71.124	ENSDARG00000056717	vars2	66	71.124	Danio_rerio
ENSCVAG00000017765	vars2	94	53.226	ENSDORG00000008516	Vars2	74	53.226	Dipodomys_ordii
ENSCVAG00000017765	vars2	94	45.214	ENSETEG00000014844	VARS2	63	45.214	Echinops_telfairi
ENSCVAG00000017765	vars2	98	52.119	ENSEASG00005019997	VARS2	67	55.226	Equus_asinus_asinus
ENSCVAG00000017765	vars2	98	52.401	ENSECAG00000018202	VARS2	65	52.542	Equus_caballus
ENSCVAG00000017765	vars2	98	71.448	ENSELUG00000017824	vars2	66	71.448	Esox_lucius
ENSCVAG00000017765	vars2	98	52.758	ENSFCAG00000010531	VARS2	65	52.758	Felis_catus
ENSCVAG00000017765	vars2	94	53.608	ENSFDAG00000017216	VARS2	63	53.608	Fukomys_damarensis
ENSCVAG00000017765	vars2	98	80.113	ENSFHEG00000013932	vars2	68	80.113	Fundulus_heteroclitus
ENSCVAG00000017765	vars2	98	69.492	ENSGMOG00000018960	vars2	72	69.492	Gadus_morhua
ENSCVAG00000017765	vars2	98	85.795	ENSGAFG00000004737	vars2	76	85.795	Gambusia_affinis
ENSCVAG00000017765	vars2	98	77.195	ENSGACG00000001464	vars2	70	77.195	Gasterosteus_aculeatus
ENSCVAG00000017765	vars2	98	54.916	ENSGAGG00000011652	VARS2	70	54.916	Gopherus_agassizii
ENSCVAG00000017765	vars2	98	51.627	ENSGGOG00000014587	VARS2	65	51.192	Gorilla_gorilla
ENSCVAG00000017765	vars2	99	77.019	ENSHBUG00000002448	vars2	69	77.019	Haplochromis_burtoni
ENSCVAG00000017765	vars2	97	51.631	ENSHGLG00000012886	VARS2	62	51.773	Heterocephalus_glaber_female
ENSCVAG00000017765	vars2	97	51.631	ENSHGLG00100016535	VARS2	64	51.773	Heterocephalus_glaber_male
ENSCVAG00000017765	vars2	94	77.226	ENSHCOG00000017907	vars2	90	77.226	Hippocampus_comes
ENSCVAG00000017765	vars2	98	71.328	ENSIPUG00000015573	Vars2	65	71.328	Ictalurus_punctatus
ENSCVAG00000017765	vars2	94	52.135	ENSSTOG00000009924	VARS2	63	52.283	Ictidomys_tridecemlineatus
ENSCVAG00000017765	vars2	94	53.314	ENSJJAG00000011144	Vars2	63	53.461	Jaculus_jaculus
ENSCVAG00000017765	vars2	98	78.121	ENSKMAG00000001393	vars2	66	78.121	Kryptolebias_marmoratus
ENSCVAG00000017765	vars2	98	77.119	ENSLBEG00000011949	vars2	67	77.119	Labrus_bergylta
ENSCVAG00000017765	vars2	52	80.423	ENSLBEG00000005480	-	56	79.894	Labrus_bergylta
ENSCVAG00000017765	vars2	98	55.197	ENSLACG00000001576	-	67	55.197	Latimeria_chalumnae
ENSCVAG00000017765	vars2	94	53.314	ENSLAFG00000015183	VARS2	63	53.314	Loxodonta_africana
ENSCVAG00000017765	vars2	94	52.725	ENSMFAG00000042367	VARS2	63	52.872	Macaca_fascicularis
ENSCVAG00000017765	vars2	94	52.872	ENSMMUG00000018609	VARS2	63	53.019	Macaca_mulatta
ENSCVAG00000017765	vars2	94	52.872	ENSMNEG00000043163	VARS2	63	53.019	Macaca_nemestrina
ENSCVAG00000017765	vars2	94	53.166	ENSMLEG00000041728	VARS2	61	53.314	Mandrillus_leucophaeus
ENSCVAG00000017765	vars2	98	77.887	ENSMAMG00000020339	vars2	66	77.887	Mastacembelus_armatus
ENSCVAG00000017765	vars2	98	78.873	ENSMZEG00005017669	vars2	66	78.873	Maylandia_zebra
ENSCVAG00000017765	vars2	58	50.943	ENSMGAG00000008005	-	99	50.943	Meleagris_gallopavo
ENSCVAG00000017765	vars2	94	52.725	ENSMAUG00000018946	Vars2	63	52.725	Mesocricetus_auratus
ENSCVAG00000017765	vars2	83	55.980	ENSMICG00000005365	VARS2	66	55.980	Microcebus_murinus
ENSCVAG00000017765	vars2	94	48.159	ENSMOCG00000014607	Vars2	53	57.744	Microtus_ochrogaster
ENSCVAG00000017765	vars2	98	76.738	ENSMMOG00000012122	vars2	65	76.738	Mola_mola
ENSCVAG00000017765	vars2	93	52.353	ENSMODG00000015848	VARS2	62	52.353	Monodelphis_domestica
ENSCVAG00000017765	vars2	98	78.028	ENSMALG00000009217	vars2	70	77.479	Monopterus_albus
ENSCVAG00000017765	vars2	94	53.756	MGP_CAROLIEiJ_G0021529	Vars2	94	56.498	Mus_caroli
ENSCVAG00000017765	vars2	94	53.756	ENSMUSG00000038838	Vars2	93	56.498	Mus_musculus
ENSCVAG00000017765	vars2	98	51.836	MGP_PahariEiJ_G0020523	Vars2	93	56.318	Mus_pahari
ENSCVAG00000017765	vars2	94	53.461	MGP_SPRETEiJ_G0022436	Vars2	94	56.137	Mus_spretus
ENSCVAG00000017765	vars2	98	53.531	ENSMPUG00000011643	VARS2	65	53.531	Mustela_putorius_furo
ENSCVAG00000017765	vars2	94	52.647	ENSMLUG00000002356	VARS2	61	52.647	Myotis_lucifugus
ENSCVAG00000017765	vars2	94	53.166	ENSNGAG00000020607	Vars2	65	53.166	Nannospalax_galili
ENSCVAG00000017765	vars2	98	50.778	ENSNLEG00000005625	VARS2	63	50.919	Nomascus_leucogenys
ENSCVAG00000017765	vars2	73	52.830	ENSMEUG00000014475	VARS2	56	52.830	Notamacropus_eugenii
ENSCVAG00000017765	vars2	88	51.174	ENSOPRG00000000682	VARS2	59	51.402	Ochotona_princeps
ENSCVAG00000017765	vars2	97	51.340	ENSODEG00000017965	VARS2	66	51.481	Octodon_degus
ENSCVAG00000017765	vars2	98	49.231	ENSONIG00000004734	vars2	70	49.231	Oreochromis_niloticus
ENSCVAG00000017765	vars2	95	46.020	ENSOANG00000000398	-	82	46.176	Ornithorhynchus_anatinus
ENSCVAG00000017765	vars2	98	75.634	ENSORLG00000010632	vars2	65	75.634	Oryzias_latipes
ENSCVAG00000017765	vars2	98	76.056	ENSORLG00020018584	vars2	65	76.056	Oryzias_latipes_hni
ENSCVAG00000017765	vars2	98	76.056	ENSORLG00015010408	vars2	65	76.056	Oryzias_latipes_hsok
ENSCVAG00000017765	vars2	98	75.847	ENSOMEG00000008360	vars2	65	75.847	Oryzias_melastigma
ENSCVAG00000017765	vars2	94	53.314	ENSOGAG00000006087	VARS2	63	51.836	Otolemur_garnettii
ENSCVAG00000017765	vars2	94	53.019	ENSOARG00000010844	VARS2	62	53.019	Ovis_aries
ENSCVAG00000017765	vars2	98	51.768	ENSPPAG00000041141	VARS2	64	51.768	Pan_paniscus
ENSCVAG00000017765	vars2	98	52.900	ENSPPRG00000006751	VARS2	63	52.900	Panthera_pardus
ENSCVAG00000017765	vars2	98	52.758	ENSPTIG00000017799	VARS2	68	52.617	Panthera_tigris_altaica
ENSCVAG00000017765	vars2	98	51.768	ENSPTRG00000034497	VARS2	64	51.768	Pan_troglodytes
ENSCVAG00000017765	vars2	94	53.166	ENSPANG00000018481	VARS2	65	53.314	Papio_anubis
ENSCVAG00000017765	vars2	98	68.272	ENSPKIG00000011372	vars2	65	68.272	Paramormyrops_kingsleyae
ENSCVAG00000017765	vars2	69	61.188	ENSPSIG00000006206	VARS2	73	61.089	Pelodiscus_sinensis
ENSCVAG00000017765	vars2	99	73.296	ENSPMGG00000000465	vars2	68	73.296	Periophthalmus_magnuspinnatus
ENSCVAG00000017765	vars2	98	51.695	ENSPEMG00000014691	Vars2	67	51.695	Peromyscus_maniculatus_bairdii
ENSCVAG00000017765	vars2	98	53.099	ENSPCIG00000015040	VARS2	65	53.099	Phascolarctos_cinereus
ENSCVAG00000017765	vars2	98	82.345	ENSPFOG00000017616	vars2	65	82.345	Poecilia_formosa
ENSCVAG00000017765	vars2	98	82.394	ENSPLAG00000019778	vars2	66	82.394	Poecilia_latipinna
ENSCVAG00000017765	vars2	98	82.394	ENSPMEG00000011123	vars2	66	82.394	Poecilia_mexicana
ENSCVAG00000017765	vars2	98	77.731	ENSPREG00000014998	vars2	69	77.731	Poecilia_reticulata
ENSCVAG00000017765	vars2	98	51.909	ENSPPYG00000016424	VARS2	64	52.051	Pongo_abelii
ENSCVAG00000017765	vars2	94	51.906	ENSPCOG00000014839	VARS2	61	51.906	Propithecus_coquereli
ENSCVAG00000017765	vars2	95	53.207	ENSPVAG00000004197	VARS2	63	53.207	Pteropus_vampyrus
ENSCVAG00000017765	vars2	92	79.268	ENSPNYG00000010314	vars2	70	79.268	Pundamilia_nyererei
ENSCVAG00000017765	vars2	98	72.740	ENSPNAG00000026793	vars2	65	72.740	Pygocentrus_nattereri
ENSCVAG00000017765	vars2	94	52.283	ENSRNOG00000000833	Vars2	65	50.847	Rattus_norvegicus
ENSCVAG00000017765	vars2	98	51.768	ENSRBIG00000032725	VARS2	64	51.909	Rhinopithecus_bieti
ENSCVAG00000017765	vars2	98	51.627	ENSRROG00000043847	VARS2	64	51.768	Rhinopithecus_roxellana
ENSCVAG00000017765	vars2	94	51.213	ENSSBOG00000033240	VARS2	62	51.213	Saimiri_boliviensis_boliviensis
ENSCVAG00000017765	vars2	93	53.994	ENSSHAG00000009307	VARS2	63	53.994	Sarcophilus_harrisii
ENSCVAG00000017765	vars2	98	69.350	ENSSFOG00015016187	vars2	65	69.350	Scleropages_formosus
ENSCVAG00000017765	vars2	98	78.329	ENSSMAG00000020842	vars2	65	78.329	Scophthalmus_maximus
ENSCVAG00000017765	vars2	98	80.141	ENSSDUG00000011598	vars2	66	80.141	Seriola_dumerili
ENSCVAG00000017765	vars2	98	79.632	ENSSLDG00000015492	vars2	66	79.632	Seriola_lalandi_dorsalis
ENSCVAG00000017765	vars2	88	56.162	ENSSPUG00000014700	VARS2	65	56.162	Sphenodon_punctatus
ENSCVAG00000017765	vars2	98	77.447	ENSSPAG00000004654	vars2	65	77.447	Stegastes_partitus
ENSCVAG00000017765	vars2	94	53.756	ENSSSCG00000001384	VARS2	67	53.756	Sus_scrofa
ENSCVAG00000017765	vars2	98	74.646	ENSTRUG00000005264	vars2	66	74.646	Takifugu_rubripes
ENSCVAG00000017765	vars2	98	70.968	ENSTNIG00000005916	vars2	65	71.248	Tetraodon_nigroviridis
ENSCVAG00000017765	vars2	92	50.075	ENSTTRG00000012243	VARS2	63	50.225	Tursiops_truncatus
ENSCVAG00000017765	vars2	98	52.684	ENSUAMG00000026124	VARS2	74	52.684	Ursus_americanus
ENSCVAG00000017765	vars2	98	52.966	ENSUMAG00000019894	VARS2	65	52.966	Ursus_maritimus
ENSCVAG00000017765	vars2	99	52.646	ENSVVUG00000010754	VARS2	62	52.646	Vulpes_vulpes
ENSCVAG00000017765	vars2	93	53.744	ENSXETG00000003036	vars2	69	53.744	Xenopus_tropicalis
ENSCVAG00000017765	vars2	98	85.411	ENSXCOG00000003455	vars2	67	85.411	Xiphophorus_couchianus
ENSCVAG00000017765	vars2	98	85.493	ENSXMAG00000013523	vars2	66	85.493	Xiphophorus_maculatus