EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000017798 (Gene tree)
Gene ID: -
Gene Symbol: rrp36
Alias: cb268|sb:cb268|si:dkey-236e20.6
Full Name: ribosomal RNA processing 36
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8881 bases
Position: chrKL654320.1:64290-73170
Accession: 107104623
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015047	RRP36	PF06102.12	1.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023038	-	663	XM_015404663	ENSCVAP00000015047	220 (aa)	XP_015260149	-

Gene Model

Click here to download ENSCVAG00000017798's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017798's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017798	rrp36	93	47.664	ENSG00000124541	RRP36	82	47.664	Homo_sapiens
ENSCVAG00000017798	rrp36	95	63.721	ENSAPOG00000022015	rrp36	78	64.762	Acanthochromis_polyacanthus
ENSCVAG00000017798	rrp36	96	65.596	ENSACIG00000020578	-	71	65.596	Amphilophus_citrinellus
ENSCVAG00000017798	rrp36	95	63.134	ENSAOCG00000013439	rrp36	66	64.651	Amphiprion_ocellaris
ENSCVAG00000017798	rrp36	95	63.134	ENSAPEG00000020996	rrp36	66	64.651	Amphiprion_percula
ENSCVAG00000017798	rrp36	96	63.927	ENSATEG00000016946	rrp36	63	64.977	Anabas_testudineus
ENSCVAG00000017798	rrp36	93	48.598	ENSANAG00000021773	RRP36	83	48.598	Aotus_nancymaae
ENSCVAG00000017798	rrp36	99	59.375	ENSACLG00000013982	RRP36	92	59.375	Astatotilapia_calliptera
ENSCVAG00000017798	rrp36	95	59.535	ENSACLG00000008408	rrp36	90	59.535	Astatotilapia_calliptera
ENSCVAG00000017798	rrp36	92	47.642	ENSBTAG00000053873	RRP36	85	47.642	Bos_taurus
ENSCVAG00000017798	rrp36	93	48.131	ENSCJAG00000004943	RRP36	83	48.131	Callithrix_jacchus
ENSCVAG00000017798	rrp36	95	47.059	ENSCAFG00020011057	RRP36	94	47.059	Canis_lupus_dingo
ENSCVAG00000017798	rrp36	94	46.296	ENSCHIG00000016354	-	85	46.296	Capra_hircus
ENSCVAG00000017798	rrp36	86	46.231	ENSCHIG00000003210	-	88	46.231	Capra_hircus
ENSCVAG00000017798	rrp36	93	36.866	ENSCHIG00000019781	-	86	36.866	Capra_hircus
ENSCVAG00000017798	rrp36	93	46.729	ENSTSYG00000037176	RRP36	83	46.729	Carlito_syrichta
ENSCVAG00000017798	rrp36	91	43.891	ENSCAPG00000010983	RRP36	89	48.077	Cavia_aperea
ENSCVAG00000017798	rrp36	93	47.642	ENSCPOG00000025932	RRP36	94	47.642	Cavia_porcellus
ENSCVAG00000017798	rrp36	93	48.131	ENSCCAG00000000048	RRP36	83	48.131	Cebus_capucinus
ENSCVAG00000017798	rrp36	93	48.598	ENSCATG00000041903	RRP36	82	48.598	Cercocebus_atys
ENSCVAG00000017798	rrp36	93	48.837	ENSCLAG00000013166	RRP36	95	48.837	Chinchilla_lanigera
ENSCVAG00000017798	rrp36	93	48.598	ENSCSAG00000011553	RRP36	82	48.598	Chlorocebus_sabaeus
ENSCVAG00000017798	rrp36	92	51.174	ENSCPBG00000003555	RRP36	57	51.174	Chrysemys_picta_bellii
ENSCVAG00000017798	rrp36	75	34.615	ENSCING00000012193	-	70	34.463	Ciona_intestinalis
ENSCVAG00000017798	rrp36	87	32.836	ENSCSAVG00000002672	-	92	33.014	Ciona_savignyi
ENSCVAG00000017798	rrp36	92	48.585	ENSCANG00000035127	RRP36	83	48.585	Colobus_angolensis_palliatus
ENSCVAG00000017798	rrp36	93	48.113	ENSCGRG00001021461	Rrp36	93	48.113	Cricetulus_griseus_chok1gshd
ENSCVAG00000017798	rrp36	93	48.113	ENSCGRG00000006286	Rrp36	93	48.113	Cricetulus_griseus_crigri
ENSCVAG00000017798	rrp36	93	58.962	ENSCSEG00000001039	RRP36	66	58.636	Cynoglossus_semilaevis
ENSCVAG00000017798	rrp36	92	54.762	ENSDARG00000032516	rrp36	65	54.762	Danio_rerio
ENSCVAG00000017798	rrp36	92	43.810	ENSDORG00000012186	Rrp36	91	43.333	Dipodomys_ordii
ENSCVAG00000017798	rrp36	92	30.275	FBgn0038235	CG8461	87	31.364	Drosophila_melanogaster
ENSCVAG00000017798	rrp36	93	48.598	ENSEASG00005003169	RRP36	93	48.372	Equus_asinus_asinus
ENSCVAG00000017798	rrp36	93	48.598	ENSECAG00000040238	RRP36	93	48.598	Equus_caballus
ENSCVAG00000017798	rrp36	63	62.500	ENSEEUG00000010515	RRP36	60	62.500	Erinaceus_europaeus
ENSCVAG00000017798	rrp36	95	58.986	ENSELUG00000016840	rrp36	60	58.986	Esox_lucius
ENSCVAG00000017798	rrp36	92	48.113	ENSFCAG00000043818	RRP36	84	48.113	Felis_catus
ENSCVAG00000017798	rrp36	92	46.948	ENSFDAG00000010380	RRP36	98	46.948	Fukomys_damarensis
ENSCVAG00000017798	rrp36	90	67.839	ENSFHEG00000000761	rrp36	100	67.839	Fundulus_heteroclitus
ENSCVAG00000017798	rrp36	95	69.266	ENSGAFG00000017817	rrp36	61	69.266	Gambusia_affinis
ENSCVAG00000017798	rrp36	94	60.000	ENSGACG00000019603	RRP36	65	60.000	Gasterosteus_aculeatus
ENSCVAG00000017798	rrp36	93	48.372	ENSGGOG00000037384	RRP36	84	48.372	Gorilla_gorilla
ENSCVAG00000017798	rrp36	95	62.212	ENSHBUG00000008974	RRP36	66	62.212	Haplochromis_burtoni
ENSCVAG00000017798	rrp36	95	46.575	ENSHGLG00000018082	RRP36	85	46.575	Heterocephalus_glaber_female
ENSCVAG00000017798	rrp36	95	46.575	ENSHGLG00100019303	RRP36	85	46.575	Heterocephalus_glaber_male
ENSCVAG00000017798	rrp36	99	44.292	ENSHCOG00000010303	rrp36	87	44.292	Hippocampus_comes
ENSCVAG00000017798	rrp36	93	54.286	ENSIPUG00000016548	rrp36	70	55.238	Ictalurus_punctatus
ENSCVAG00000017798	rrp36	94	46.544	ENSSTOG00000009511	RRP36	91	46.544	Ictidomys_tridecemlineatus
ENSCVAG00000017798	rrp36	93	46.698	ENSJJAG00000023363	Rrp36	94	46.226	Jaculus_jaculus
ENSCVAG00000017798	rrp36	96	63.927	ENSKMAG00000006968	rrp36	62	63.927	Kryptolebias_marmoratus
ENSCVAG00000017798	rrp36	96	54.839	ENSLBEG00000017728	-	67	54.839	Labrus_bergylta
ENSCVAG00000017798	rrp36	92	51.905	ENSLACG00000001888	rrp36	65	51.628	Latimeria_chalumnae
ENSCVAG00000017798	rrp36	92	55.981	ENSLOCG00000015862	RRP36	59	56.459	Lepisosteus_oculatus
ENSCVAG00000017798	rrp36	92	46.977	ENSLAFG00000032704	RRP36	98	46.977	Loxodonta_africana
ENSCVAG00000017798	rrp36	93	48.598	ENSMFAG00000003547	RRP36	82	48.598	Macaca_fascicularis
ENSCVAG00000017798	rrp36	93	48.131	ENSMNEG00000044747	RRP36	82	48.131	Macaca_nemestrina
ENSCVAG00000017798	rrp36	93	48.598	ENSMLEG00000034272	RRP36	82	48.598	Mandrillus_leucophaeus
ENSCVAG00000017798	rrp36	95	66.820	ENSMAMG00000019157	-	59	66.820	Mastacembelus_armatus
ENSCVAG00000017798	rrp36	95	62.673	ENSMZEG00005015204	RRP36	66	62.673	Maylandia_zebra
ENSCVAG00000017798	rrp36	93	47.867	ENSMAUG00000003648	Rrp36	94	47.867	Mesocricetus_auratus
ENSCVAG00000017798	rrp36	96	46.154	ENSMICG00000045230	RRP36	87	46.154	Microcebus_murinus
ENSCVAG00000017798	rrp36	96	47.248	ENSMOCG00000002009	Rrp36	90	46.789	Microtus_ochrogaster
ENSCVAG00000017798	rrp36	95	60.000	ENSMMOG00000018637	-	64	60.000	Mola_mola
ENSCVAG00000017798	rrp36	95	65.581	ENSMALG00000008142	-	69	64.384	Monopterus_albus
ENSCVAG00000017798	rrp36	92	46.890	MGP_CAROLIEiJ_G0021680	Rrp36	85	46.411	Mus_caroli
ENSCVAG00000017798	rrp36	93	47.170	ENSMUSG00000023971	Rrp36	93	46.698	Mus_musculus
ENSCVAG00000017798	rrp36	93	46.479	MGP_PahariEiJ_G0020671	Rrp36	93	46.009	Mus_pahari
ENSCVAG00000017798	rrp36	93	47.642	MGP_SPRETEiJ_G0022592	Rrp36	86	47.170	Mus_spretus
ENSCVAG00000017798	rrp36	92	47.642	ENSNLEG00000033289	RRP36	98	47.642	Nomascus_leucogenys
ENSCVAG00000017798	rrp36	74	42.775	ENSMEUG00000007149	-	97	42.775	Notamacropus_eugenii
ENSCVAG00000017798	rrp36	79	50.000	ENSOPRG00000002274	RRP36	70	50.000	Ochotona_princeps
ENSCVAG00000017798	rrp36	96	46.875	ENSODEG00000015915	RRP36	96	46.875	Octodon_degus
ENSCVAG00000017798	rrp36	95	64.186	ENSONIG00000015983	rrp36	68	64.186	Oreochromis_niloticus
ENSCVAG00000017798	rrp36	96	63.182	ENSORLG00000029500	rrp36	64	63.229	Oryzias_latipes
ENSCVAG00000017798	rrp36	96	62.896	ENSORLG00020017452	-	64	62.613	Oryzias_latipes_hni
ENSCVAG00000017798	rrp36	96	63.927	ENSORLG00015016898	rrp36	64	63.761	Oryzias_latipes_hsok
ENSCVAG00000017798	rrp36	96	65.138	ENSOMEG00000008623	RRP36	65	65.138	Oryzias_melastigma
ENSCVAG00000017798	rrp36	93	46.262	ENSOGAG00000012699	RRP36	92	46.262	Otolemur_garnettii
ENSCVAG00000017798	rrp36	96	39.640	ENSPPAG00000042831	-	87	39.732	Pan_paniscus
ENSCVAG00000017798	rrp36	92	49.057	ENSPPRG00000014610	RRP36	84	49.057	Panthera_pardus
ENSCVAG00000017798	rrp36	92	49.057	ENSPTIG00000010853	RRP36	84	49.057	Panthera_tigris_altaica
ENSCVAG00000017798	rrp36	93	48.598	ENSPTRG00000018184	RRP36	82	48.598	Pan_troglodytes
ENSCVAG00000017798	rrp36	93	48.598	ENSPANG00000025140	RRP36	82	48.598	Papio_anubis
ENSCVAG00000017798	rrp36	92	56.459	ENSPKIG00000004303	rrp36	61	57.143	Paramormyrops_kingsleyae
ENSCVAG00000017798	rrp36	98	51.802	ENSPMGG00000016870	rrp36	68	53.917	Periophthalmus_magnuspinnatus
ENSCVAG00000017798	rrp36	96	45.982	ENSPEMG00000007015	Rrp36	98	45.982	Peromyscus_maniculatus_bairdii
ENSCVAG00000017798	rrp36	95	45.662	ENSPCIG00000009179	RRP36	87	45.662	Phascolarctos_cinereus
ENSCVAG00000017798	rrp36	95	70.968	ENSPFOG00000011959	rrp36	56	70.968	Poecilia_formosa
ENSCVAG00000017798	rrp36	95	70.968	ENSPLAG00000023901	rrp36	61	70.968	Poecilia_latipinna
ENSCVAG00000017798	rrp36	95	70.507	ENSPMEG00000024099	rrp36	60	70.507	Poecilia_mexicana
ENSCVAG00000017798	rrp36	95	70.507	ENSPREG00000022787	rrp36	61	70.507	Poecilia_reticulata
ENSCVAG00000017798	rrp36	96	47.511	ENSPPYG00000016628	RRP36	85	47.511	Pongo_abelii
ENSCVAG00000017798	rrp36	95	44.749	ENSPCOG00000018401	RRP36	87	44.292	Propithecus_coquereli
ENSCVAG00000017798	rrp36	92	46.698	ENSPVAG00000008714	RRP36	85	46.698	Pteropus_vampyrus
ENSCVAG00000017798	rrp36	95	62.673	ENSPNYG00000018030	RRP36	66	62.673	Pundamilia_nyererei
ENSCVAG00000017798	rrp36	94	53.302	ENSPNAG00000027207	rrp36	59	53.302	Pygocentrus_nattereri
ENSCVAG00000017798	rrp36	93	48.585	ENSRNOG00000017836	Rrp36	86	48.585	Rattus_norvegicus
ENSCVAG00000017798	rrp36	93	48.598	ENSRBIG00000040019	RRP36	82	48.598	Rhinopithecus_bieti
ENSCVAG00000017798	rrp36	93	48.598	ENSRROG00000040721	RRP36	82	48.598	Rhinopithecus_roxellana
ENSCVAG00000017798	rrp36	93	48.131	ENSSBOG00000030228	RRP36	85	48.131	Saimiri_boliviensis_boliviensis
ENSCVAG00000017798	rrp36	95	55.556	ENSSFOG00015023058	rrp36	64	55.556	Scleropages_formosus
ENSCVAG00000017798	rrp36	96	61.644	ENSSMAG00000020911	-	59	62.100	Scophthalmus_maximus
ENSCVAG00000017798	rrp36	96	65.438	ENSSDUG00000018924	rrp36	60	65.438	Seriola_dumerili
ENSCVAG00000017798	rrp36	93	65.550	ENSSLDG00000019741	RRP36	98	65.550	Seriola_lalandi_dorsalis
ENSCVAG00000017798	rrp36	92	47.619	ENSSARG00000000873	RRP36	97	47.143	Sorex_araneus
ENSCVAG00000017798	rrp36	92	53.333	ENSSPUG00000000213	RRP36	58	53.333	Sphenodon_punctatus
ENSCVAG00000017798	rrp36	95	63.594	ENSSPAG00000017154	rrp36	75	62.963	Stegastes_partitus
ENSCVAG00000017798	rrp36	86	37.000	ENSSSCG00000037862	-	85	37.000	Sus_scrofa
ENSCVAG00000017798	rrp36	93	47.907	ENSSSCG00000001656	RRP36	85	47.907	Sus_scrofa
ENSCVAG00000017798	rrp36	93	57.820	ENSTRUG00000021893	rrp36	64	57.820	Takifugu_rubripes
ENSCVAG00000017798	rrp36	96	60.352	ENSTNIG00000004741	rrp36	89	60.352	Tetraodon_nigroviridis
ENSCVAG00000017798	rrp36	67	57.500	ENSTBEG00000012326	RRP36	98	41.038	Tupaia_belangeri
ENSCVAG00000017798	rrp36	93	47.196	ENSTTRG00000007001	RRP36	86	47.196	Tursiops_truncatus
ENSCVAG00000017798	rrp36	92	48.585	ENSUAMG00000015865	RRP36	85	48.585	Ursus_americanus
ENSCVAG00000017798	rrp36	73	52.795	ENSUMAG00000008726	RRP36	98	52.795	Ursus_maritimus
ENSCVAG00000017798	rrp36	92	49.057	ENSVPAG00000008904	RRP36	98	49.057	Vicugna_pacos
ENSCVAG00000017798	rrp36	95	47.059	ENSVVUG00000027816	RRP36	94	47.059	Vulpes_vulpes
ENSCVAG00000017798	rrp36	96	71.090	ENSXCOG00000011238	rrp36	93	71.090	Xiphophorus_couchianus