EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000017878 (Gene tree)
Gene ID: -
Gene Symbol: rrs1
Alias: fj66c04|wu:fj66c04|zgc:66358
Full Name: ribosome biogenesis regulator homolog
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 1041 bases
Position: chrKL652811.1:612787-613827
Accession: 107090787
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015121	RRS1	PF04939.12	1.7e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031393	-	909	XM_015384361	ENSCVAP00000015121	302 (aa)	XP_015239847	-

Gene Model

Click here to download ENSCVAG00000017878's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017878's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000017878	rrs1	98	52.198	ENSG00000179041	RRS1	84	56.721	Homo_sapiens
ENSCVAG00000017878	rrs1	89	68.790	ENSATEG00000011743	rrs1	86	70.530	Anabas_testudineus
ENSCVAG00000017878	rrs1	98	53.571	ENSANAG00000018116	RRS1	84	57.049	Aotus_nancymaae
ENSCVAG00000017878	rrs1	87	62.092	ENSAMXG00000037893	rrs1	79	61.842	Astyanax_mexicanus
ENSCVAG00000017878	rrs1	98	52.186	ENSBTAG00000016716	RRS1	84	56.026	Bos_taurus
ENSCVAG00000017878	rrs1	74	36.594	WBGene00007617	rrbs-1	81	37.319	Caenorhabditis_elegans
ENSCVAG00000017878	rrs1	98	53.297	ENSCJAG00000022034	RRS1	84	56.721	Callithrix_jacchus
ENSCVAG00000017878	rrs1	98	52.222	ENSCAFG00000007313	RRS1	84	56.678	Canis_familiaris
ENSCVAG00000017878	rrs1	98	52.222	ENSCAFG00020020365	-	84	56.678	Canis_lupus_dingo
ENSCVAG00000017878	rrs1	98	52.222	ENSCAFG00020016049	-	84	56.678	Canis_lupus_dingo
ENSCVAG00000017878	rrs1	98	51.366	ENSCHIG00000009141	RRS1	84	56.026	Capra_hircus
ENSCVAG00000017878	rrs1	91	56.308	ENSCPOG00000000647	RRS1	85	57.003	Cavia_porcellus
ENSCVAG00000017878	rrs1	98	53.571	ENSCCAG00000032186	RRS1	84	57.377	Cebus_capucinus
ENSCVAG00000017878	rrs1	98	52.473	ENSCATG00000016944	RRS1	84	57.377	Cercocebus_atys
ENSCVAG00000017878	rrs1	98	53.022	ENSCSAG00000018552	RRS1	84	57.049	Chlorocebus_sabaeus
ENSCVAG00000017878	rrs1	90	56.289	ENSCHOG00000002455	RRS1	84	57.003	Choloepus_hoffmanni
ENSCVAG00000017878	rrs1	91	50.610	ENSCPBG00000021374	RRS1	89	50.962	Chrysemys_picta_bellii
ENSCVAG00000017878	rrs1	93	43.558	ENSCING00000002177	-	93	43.854	Ciona_intestinalis
ENSCVAG00000017878	rrs1	91	42.056	ENSCSAVG00000011819	-	93	43.046	Ciona_savignyi
ENSCVAG00000017878	rrs1	98	53.297	ENSCANG00000012718	RRS1	84	57.377	Colobus_angolensis_palliatus
ENSCVAG00000017878	rrs1	99	54.335	ENSCGRG00001015575	-	88	56.352	Cricetulus_griseus_chok1gshd
ENSCVAG00000017878	rrs1	99	55.172	ENSCGRG00001002391	-	84	57.003	Cricetulus_griseus_chok1gshd
ENSCVAG00000017878	rrs1	85	80.620	ENSCSEG00000014750	rrs1	83	80.385	Cynoglossus_semilaevis
ENSCVAG00000017878	rrs1	84	65.217	ENSDARG00000003941	rrs1	86	65.217	Danio_rerio
ENSCVAG00000017878	rrs1	96	50.959	ENSDNOG00000017900	RRS1	82	56.352	Dasypus_novemcinctus
ENSCVAG00000017878	rrs1	58	51.818	ENSDORG00000026331	Rrs1	73	50.515	Dipodomys_ordii
ENSCVAG00000017878	rrs1	96	40.688	FBgn0052409	CG32409	84	43.581	Drosophila_melanogaster
ENSCVAG00000017878	rrs1	52	53.266	ENSETEG00000000935	-	55	53.266	Echinops_telfairi
ENSCVAG00000017878	rrs1	80	48.772	ENSEBUG00000013506	rrs1	96	48.772	Eptatretus_burgeri
ENSCVAG00000017878	rrs1	98	52.473	ENSEASG00005001691	RRS1	84	57.329	Equus_asinus_asinus
ENSCVAG00000017878	rrs1	98	55.132	ENSECAG00000004492	RRS1	91	57.049	Equus_caballus
ENSCVAG00000017878	rrs1	98	51.648	ENSEEUG00000013719	RRS1	83	56.721	Erinaceus_europaeus
ENSCVAG00000017878	rrs1	98	52.162	ENSFCAG00000014332	RRS1	84	56.678	Felis_catus
ENSCVAG00000017878	rrs1	82	46.844	ENSGALG00000030890	RRS1	87	47.588	Gallus_gallus
ENSCVAG00000017878	rrs1	85	66.777	ENSGACG00000002969	rrs1	85	66.556	Gasterosteus_aculeatus
ENSCVAG00000017878	rrs1	90	49.231	ENSGAGG00000023718	RRS1	85	51.299	Gopherus_agassizii
ENSCVAG00000017878	rrs1	98	52.747	ENSGGOG00000026663	RRS1	84	57.377	Gorilla_gorilla
ENSCVAG00000017878	rrs1	98	53.005	ENSHGLG00000021423	RRS1	84	57.329	Heterocephalus_glaber_female
ENSCVAG00000017878	rrs1	98	53.005	ENSHGLG00100020640	RRS1	84	57.329	Heterocephalus_glaber_male
ENSCVAG00000017878	rrs1	99	61.919	ENSHCOG00000015358	rrs1	84	64.784	Hippocampus_comes
ENSCVAG00000017878	rrs1	90	60.252	ENSIPUG00000014412	rrs1	87	62.171	Ictalurus_punctatus
ENSCVAG00000017878	rrs1	98	54.372	ENSSTOG00000026310	RRS1	98	51.247	Ictidomys_tridecemlineatus
ENSCVAG00000017878	rrs1	77	49.640	ENSJJAG00000020395	-	81	49.640	Jaculus_jaculus
ENSCVAG00000017878	rrs1	86	55.410	ENSJJAG00000011507	-	83	55.410	Jaculus_jaculus
ENSCVAG00000017878	rrs1	86	69.967	ENSKMAG00000008238	rrs1	89	70.199	Kryptolebias_marmoratus
ENSCVAG00000017878	rrs1	86	63.607	ENSLACG00000004058	RRS1	92	63.487	Latimeria_chalumnae
ENSCVAG00000017878	rrs1	90	63.175	ENSLOCG00000017812	rrs1	89	63.816	Lepisosteus_oculatus
ENSCVAG00000017878	rrs1	90	56.329	ENSLAFG00000015405	RRS1	83	57.329	Loxodonta_africana
ENSCVAG00000017878	rrs1	96	55.000	ENSMFAG00000042747	RRS1	92	54.925	Macaca_fascicularis
ENSCVAG00000017878	rrs1	96	55.000	ENSMMUG00000000886	RRS1	92	54.925	Macaca_mulatta
ENSCVAG00000017878	rrs1	96	55.000	ENSMNEG00000011696	RRS1	92	54.925	Macaca_nemestrina
ENSCVAG00000017878	rrs1	98	52.473	ENSMLEG00000004794	RRS1	84	57.377	Mandrillus_leucophaeus
ENSCVAG00000017878	rrs1	84	69.128	ENSMZEG00005004349	RRS1	85	68.750	Maylandia_zebra
ENSCVAG00000017878	rrs1	99	54.469	ENSMAUG00000005392	Rrs1	84	57.003	Mesocricetus_auratus
ENSCVAG00000017878	rrs1	98	55.233	ENSMOCG00000015862	Rrs1	79	56.678	Microtus_ochrogaster
ENSCVAG00000017878	rrs1	91	54.348	ENSMODG00000024952	RRS1	84	54.902	Monodelphis_domestica
ENSCVAG00000017878	rrs1	98	55.977	MGP_CAROLIEiJ_G0013936	Rrs1	84	57.329	Mus_caroli
ENSCVAG00000017878	rrs1	98	55.233	ENSMUSG00000061024	Rrs1	84	57.329	Mus_musculus
ENSCVAG00000017878	rrs1	98	53.005	MGP_PahariEiJ_G0023883	Rrs1	84	57.003	Mus_pahari
ENSCVAG00000017878	rrs1	99	55.172	MGP_SPRETEiJ_G0014739	Rrs1	84	57.329	Mus_spretus
ENSCVAG00000017878	rrs1	98	53.552	ENSMPUG00000018626	RRS1	97	51.524	Mustela_putorius_furo
ENSCVAG00000017878	rrs1	94	54.217	ENSNGAG00000012904	Rrs1	84	56.026	Nannospalax_galili
ENSCVAG00000017878	rrs1	74	51.943	ENSNLEG00000027730	RRS1	75	55.702	Nomascus_leucogenys
ENSCVAG00000017878	rrs1	92	68.111	ENSONIG00000014187	rrs1	88	69.737	Oreochromis_niloticus
ENSCVAG00000017878	rrs1	98	49.425	ENSOANG00000012348	RRS1	82	51.961	Ornithorhynchus_anatinus
ENSCVAG00000017878	rrs1	89	57.595	ENSOCUG00000013490	RRS1	83	57.655	Oryctolagus_cuniculus
ENSCVAG00000017878	rrs1	87	86.742	ENSOMEG00000008525	rrs1	87	86.538	Oryzias_melastigma
ENSCVAG00000017878	rrs1	98	51.923	ENSOGAG00000001085	RRS1	84	55.738	Otolemur_garnettii
ENSCVAG00000017878	rrs1	98	49.432	ENSOARG00000017417	RRS1	81	52.117	Ovis_aries
ENSCVAG00000017878	rrs1	98	52.473	ENSPPAG00000024378	RRS1	84	57.049	Pan_paniscus
ENSCVAG00000017878	rrs1	98	52.186	ENSPPRG00000021408	RRS1	84	56.352	Panthera_pardus
ENSCVAG00000017878	rrs1	98	52.198	ENSPTRG00000030988	RRS1	84	56.721	Pan_troglodytes
ENSCVAG00000017878	rrs1	99	42.769	ENSPANG00000035974	RRS1	80	42.804	Papio_anubis
ENSCVAG00000017878	rrs1	84	61.409	ENSPKIG00000007953	rrs1	88	60.927	Paramormyrops_kingsleyae
ENSCVAG00000017878	rrs1	96	55.325	ENSPEMG00000014427	Rrs1	84	56.678	Peromyscus_maniculatus_bairdii
ENSCVAG00000017878	rrs1	85	49.000	ENSPMAG00000006513	rrs1	79	49.000	Petromyzon_marinus
ENSCVAG00000017878	rrs1	86	53.595	ENSPCIG00000026695	RRS1	85	53.595	Phascolarctos_cinereus
ENSCVAG00000017878	rrs1	84	76.846	ENSPFOG00000020722	rrs1	94	77.303	Poecilia_formosa
ENSCVAG00000017878	rrs1	85	90.698	ENSPREG00000019960	rrs1	84	90.385	Poecilia_reticulata
ENSCVAG00000017878	rrs1	83	57.432	ENSPPYG00000018637	RRS1	99	57.432	Pongo_abelii
ENSCVAG00000017878	rrs1	95	56.156	ENSPCAG00000009115	RRS1	84	57.049	Procavia_capensis
ENSCVAG00000017878	rrs1	82	64.948	ENSPNAG00000021707	rrs1	86	65.017	Pygocentrus_nattereri
ENSCVAG00000017878	rrs1	98	52.732	ENSRNOG00000007240	Rrs1	84	57.003	Rattus_norvegicus
ENSCVAG00000017878	rrs1	98	52.198	ENSRBIG00000009132	RRS1	84	57.049	Rhinopithecus_bieti
ENSCVAG00000017878	rrs1	98	52.198	ENSRROG00000013472	RRS1	84	57.049	Rhinopithecus_roxellana
ENSCVAG00000017878	rrs1	93	52.422	ENSSBOG00000011006	-	86	56.721	Saimiri_boliviensis_boliviensis
ENSCVAG00000017878	rrs1	93	52.422	ENSSBOG00000012639	-	86	56.721	Saimiri_boliviensis_boliviensis
ENSCVAG00000017878	rrs1	82	57.430	ENSSFOG00015015772	rrs1	82	56.917	Scleropages_formosus
ENSCVAG00000017878	rrs1	98	61.496	ENSSMAG00000015226	rrs1	81	69.153	Scophthalmus_maximus
ENSCVAG00000017878	rrs1	82	63.636	ENSSARG00000006976	RRS1	65	63.559	Sorex_araneus
ENSCVAG00000017878	rrs1	98	54.342	ENSSSCG00000006214	RRS1	92	54.572	Sus_scrofa
ENSCVAG00000017878	rrs1	93	64.024	ENSTRUG00000008796	rrs1	89	66.323	Takifugu_rubripes
ENSCVAG00000017878	rrs1	84	68.792	ENSTNIG00000004026	rrs1	90	69.079	Tetraodon_nigroviridis
ENSCVAG00000017878	rrs1	98	52.473	ENSTBEG00000014752	RRS1	84	57.049	Tupaia_belangeri
ENSCVAG00000017878	rrs1	98	54.098	ENSUAMG00000008502	RRS1	84	57.003	Ursus_americanus
ENSCVAG00000017878	rrs1	98	52.486	ENSVVUG00000018452	RRS1	84	56.678	Vulpes_vulpes
ENSCVAG00000017878	rrs1	84	76.510	ENSXCOG00000009809	rrs1	86	76.974	Xiphophorus_couchianus