EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000017892 (Gene tree)
Gene ID
107082418
Gene Symbol
hdlbpa
Alias
HBP|cb591|cb811|hdlbp|wu:fb36d01|wu:fb94h08|wu:fc23d06|wu:fc75h07
Full Name
high density lipoprotein binding protein
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
23145 bases
Position
chrKL652553.1:1662307-1685451
Accession
107082418
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000029810KH_1PF00013.298.7e-181114
ENSCVAP00000029810KH_1PF00013.298.7e-181214
ENSCVAP00000029810KH_1PF00013.298.7e-181314
ENSCVAP00000029810KH_1PF00013.298.7e-181414
ENSCVAP00000029810KH_1PF00013.298.7e-181514
ENSCVAP00000029810KH_1PF00013.298.7e-181614
ENSCVAP00000029810KH_1PF00013.298.7e-181714
ENSCVAP00000029810KH_1PF00013.298.7e-181814
ENSCVAP00000029810KH_1PF00013.298.7e-181914
ENSCVAP00000029810KH_1PF00013.298.7e-1811014
ENSCVAP00000029810KH_1PF00013.298.7e-1811114
ENSCVAP00000029810KH_1PF00013.298.7e-1811214
ENSCVAP00000029810KH_1PF00013.298.7e-1811314
ENSCVAP00000029810KH_1PF00013.298.7e-1811414
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000023125-5418XM_015371099ENSCVAP000000298101270 (aa)XP_015226585UPI0007427D79
Gene Model
Click here to download ENSCVAG00000017892's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017892's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000017892hdlbpa10071.026ENSCVAG00000005345hdlbpb10071.104
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000017892hdlbpa9978.650ENSG00000115677HDLBP10082.667Homo_sapiens
ENSCVAG00000017892hdlbpa10093.323ENSAPOG00000012609hdlbpa10093.716Acanthochromis_polyacanthus
ENSCVAG00000017892hdlbpa9978.448ENSAMEG00000016552HDLBP10078.448Ailuropoda_melanoleuca
ENSCVAG00000017892hdlbpa10090.053ENSACIG00000006015hdlbpa10090.053Amphilophus_citrinellus
ENSCVAG00000017892hdlbpa10093.401ENSAOCG00000000300hdlbpa10093.794Amphiprion_ocellaris
ENSCVAG00000017892hdlbpa10093.323ENSAPEG00000000522hdlbpa10093.716Amphiprion_percula
ENSCVAG00000017892hdlbpa10092.302ENSATEG00000009748hdlbpa10092.302Anabas_testudineus
ENSCVAG00000017892hdlbpa9979.984ENSACAG00000001556HDLBP10079.984Anolis_carolinensis
ENSCVAG00000017892hdlbpa9978.571ENSANAG00000020545HDLBP10078.571Aotus_nancymaae
ENSCVAG00000017892hdlbpa10092.380ENSACLG00000025965hdlbpa10092.537Astatotilapia_calliptera
ENSCVAG00000017892hdlbpa9390.000ENSAMXG00000004221hdlbpa10090.000Astyanax_mexicanus
ENSCVAG00000017892hdlbpa9977.786ENSBTAG00000004315HDLBP10077.786Bos_taurus
ENSCVAG00000017892hdlbpa9978.370ENSCJAG00000006152HDLBP10078.370Callithrix_jacchus
ENSCVAG00000017892hdlbpa9978.493ENSCAFG00000012913HDLBP10078.934Canis_familiaris
ENSCVAG00000017892hdlbpa9978.493ENSCAFG00020025089HDLBP10078.493Canis_lupus_dingo
ENSCVAG00000017892hdlbpa9977.943ENSCHIG00000022364HDLBP10077.943Capra_hircus
ENSCVAG00000017892hdlbpa9978.022ENSTSYG00000002379HDLBP10078.022Carlito_syrichta
ENSCVAG00000017892hdlbpa9975.610ENSCAPG00000008584HDLBP10075.610Cavia_aperea
ENSCVAG00000017892hdlbpa9978.757ENSCPOG00000006297HDLBP10078.757Cavia_porcellus
ENSCVAG00000017892hdlbpa9255.879ENSCCAG00000037920-10055.879Cebus_capucinus
ENSCVAG00000017892hdlbpa9978.493ENSCCAG00000023361-10078.493Cebus_capucinus
ENSCVAG00000017892hdlbpa9978.826ENSCATG00000039363HDLBP9979.945Cercocebus_atys
ENSCVAG00000017892hdlbpa9978.914ENSCLAG00000002365HDLBP10078.914Chinchilla_lanigera
ENSCVAG00000017892hdlbpa9977.459ENSCSAG00000005781HDLBP10077.459Chlorocebus_sabaeus
ENSCVAG00000017892hdlbpa9059.271ENSCHOG00000003882-9959.271Choloepus_hoffmanni
ENSCVAG00000017892hdlbpa9978.022ENSCPBG00000002442HDLBP10078.022Chrysemys_picta_bellii
ENSCVAG00000017892hdlbpa9978.728ENSCANG00000033571HDLBP9979.945Colobus_angolensis_palliatus
ENSCVAG00000017892hdlbpa9978.807ENSCGRG00001006086Hdlbp10078.807Cricetulus_griseus_chok1gshd
ENSCVAG00000017892hdlbpa9043.908ENSCGRG000010105704921511C20Rik10043.908Cricetulus_griseus_chok1gshd
ENSCVAG00000017892hdlbpa9978.807ENSCGRG00000014444Hdlbp10078.807Cricetulus_griseus_crigri
ENSCVAG00000017892hdlbpa9744.507ENSCGRG00000015720Gm3829844.507Cricetulus_griseus_crigri
ENSCVAG00000017892hdlbpa10090.873ENSCSEG00000008853hdlbpa10090.873Cynoglossus_semilaevis
ENSCVAG00000017892hdlbpa10087.686ENSDARG00000009830hdlbpa10089.171Danio_rerio
ENSCVAG00000017892hdlbpa9976.719ENSDNOG00000006753HDLBP10076.719Dasypus_novemcinctus
ENSCVAG00000017892hdlbpa9874.000ENSETEG00000005416-7974.000Echinops_telfairi
ENSCVAG00000017892hdlbpa9978.571ENSEASG00005008249HDLBP10078.571Equus_asinus_asinus
ENSCVAG00000017892hdlbpa9978.571ENSECAG00000012829HDLBP10078.571Equus_caballus
ENSCVAG00000017892hdlbpa9947.649ENSECAG00000028723-9947.649Equus_caballus
ENSCVAG00000017892hdlbpa9952.054ENSECAG00000030885-9952.054Equus_caballus
ENSCVAG00000017892hdlbpa9468.360ENSEEUG00000014648HDLBP10068.360Erinaceus_europaeus
ENSCVAG00000017892hdlbpa10086.321ENSELUG00000010700hdlbpa10086.321Esox_lucius
ENSCVAG00000017892hdlbpa9978.571ENSFCAG00000010455HDLBP10078.571Felis_catus
ENSCVAG00000017892hdlbpa9980.612ENSFALG00000003437HDLBP10080.612Ficedula_albicollis
ENSCVAG00000017892hdlbpa9978.774ENSFDAG00000000456HDLBP10078.774Fukomys_damarensis
ENSCVAG00000017892hdlbpa10094.890ENSFHEG00000004848hdlbpa10095.126Fundulus_heteroclitus
ENSCVAG00000017892hdlbpa10087.539ENSGMOG00000009932hdlbpa10087.539Gadus_morhua
ENSCVAG00000017892hdlbpa9980.220ENSGALG00000005823HDLBP10080.534Gallus_gallus
ENSCVAG00000017892hdlbpa10062.252ENSGAFG00000016766hdlbpa10062.252Gambusia_affinis
ENSCVAG00000017892hdlbpa10089.701ENSGACG00000004648hdlbpa10089.701Gasterosteus_aculeatus
ENSCVAG00000017892hdlbpa9980.534ENSGAGG00000004256HDLBP10080.534Gopherus_agassizii
ENSCVAG00000017892hdlbpa9978.650ENSGGOG00000004392HDLBP9979.945Gorilla_gorilla
ENSCVAG00000017892hdlbpa10092.537ENSHBUG00000001136hdlbpa10092.694Haplochromis_burtoni
ENSCVAG00000017892hdlbpa9978.459ENSHGLG00000004910HDLBP10078.459Heterocephalus_glaber_female
ENSCVAG00000017892hdlbpa9978.459ENSHGLG00100013326HDLBP10079.330Heterocephalus_glaber_male
ENSCVAG00000017892hdlbpa10089.593ENSHCOG00000014837hdlbpa10089.593Hippocampus_comes
ENSCVAG00000017892hdlbpa10087.685ENSIPUG00000013088hdlbp10087.685Ictalurus_punctatus
ENSCVAG00000017892hdlbpa8477.444ENSIPUG00000013177-9377.444Ictalurus_punctatus
ENSCVAG00000017892hdlbpa9978.774ENSSTOG00000013331HDLBP10078.774Ictidomys_tridecemlineatus
ENSCVAG00000017892hdlbpa9140.536ENSJJAG00000013712-9440.536Jaculus_jaculus
ENSCVAG00000017892hdlbpa9979.121ENSJJAG00000003596Hdlbp10079.121Jaculus_jaculus
ENSCVAG00000017892hdlbpa10091.660ENSKMAG00000007571hdlbpa10091.817Kryptolebias_marmoratus
ENSCVAG00000017892hdlbpa10091.250ENSLBEG00000027461hdlbpa10091.250Labrus_bergylta
ENSCVAG00000017892hdlbpa10082.902ENSLACG00000003592HDLBP10082.902Latimeria_chalumnae
ENSCVAG00000017892hdlbpa10086.656ENSLOCG00000006278hdlbpa10086.656Lepisosteus_oculatus
ENSCVAG00000017892hdlbpa9978.414ENSLAFG00000014826HDLBP10078.414Loxodonta_africana
ENSCVAG00000017892hdlbpa9978.650ENSMFAG00000033641HDLBP9979.945Macaca_fascicularis
ENSCVAG00000017892hdlbpa9978.588ENSMMUG00000004730HDLBP10078.588Macaca_mulatta
ENSCVAG00000017892hdlbpa9978.650ENSMNEG00000024260HDLBP9979.945Macaca_nemestrina
ENSCVAG00000017892hdlbpa9978.650ENSMLEG00000042734HDLBP9979.945Mandrillus_leucophaeus
ENSCVAG00000017892hdlbpa10091.987ENSMAMG00000008611hdlbpa10092.145Mastacembelus_armatus
ENSCVAG00000017892hdlbpa10092.380ENSMZEG00005009513hdlbpa10092.537Maylandia_zebra
ENSCVAG00000017892hdlbpa9977.943ENSMGAG00000003686HDLBP10081.266Meleagris_gallopavo
ENSCVAG00000017892hdlbpa9979.042ENSMAUG00000017743Hdlbp10079.042Mesocricetus_auratus
ENSCVAG00000017892hdlbpa9979.042ENSMICG00000004569HDLBP10079.042Microcebus_murinus
ENSCVAG00000017892hdlbpa9979.042ENSMOCG00000006679Hdlbp10079.042Microtus_ochrogaster
ENSCVAG00000017892hdlbpa9886.532ENSMMOG00000006880hdlbpa9986.532Mola_mola
ENSCVAG00000017892hdlbpa9978.894ENSMODG00000016033HDLBP10078.894Monodelphis_domestica
ENSCVAG00000017892hdlbpa10091.523ENSMALG00000015095hdlbpa10091.680Monopterus_albus
ENSCVAG00000017892hdlbpa9978.964MGP_CAROLIEiJ_G0014456Hdlbp10079.888Mus_caroli
ENSCVAG00000017892hdlbpa9041.350MGP_CAROLIEiJ_G00333744921511C20Rik10041.350Mus_caroli
ENSCVAG00000017892hdlbpa9543.740MGP_CAROLIEiJ_G0033373Gm3829643.740Mus_caroli
ENSCVAG00000017892hdlbpa9978.964ENSMUSG00000034088Hdlbp10079.888Mus_musculus
ENSCVAG00000017892hdlbpa9041.350ENSMUSG000000498154921511C20Rik10041.350Mus_musculus
ENSCVAG00000017892hdlbpa9643.514ENSMUSG00000062791Gm3829643.514Mus_musculus
ENSCVAG00000017892hdlbpa8841.350MGP_PahariEiJ_G00319144921511C20Rik10041.350Mus_pahari
ENSCVAG00000017892hdlbpa9543.931MGP_PahariEiJ_G0031913Gm3829643.931Mus_pahari
ENSCVAG00000017892hdlbpa9978.885MGP_PahariEiJ_G0027692Hdlbp10079.888Mus_pahari
ENSCVAG00000017892hdlbpa9041.139MGP_SPRETEiJ_G00345394921511C20Rik10041.139Mus_spretus
ENSCVAG00000017892hdlbpa9643.139MGP_SPRETEiJ_G0034538Gm3829643.139Mus_spretus
ENSCVAG00000017892hdlbpa9978.964MGP_SPRETEiJ_G0015260Hdlbp10079.888Mus_spretus
ENSCVAG00000017892hdlbpa9978.493ENSMPUG00000000163HDLBP10078.493Mustela_putorius_furo
ENSCVAG00000017892hdlbpa9978.616ENSMLUG00000005628HDLBP10078.616Myotis_lucifugus
ENSCVAG00000017892hdlbpa9979.042ENSNGAG00000014873Hdlbp10079.042Nannospalax_galili
ENSCVAG00000017892hdlbpa9992.344ENSNBRG00000000051hdlbpa9992.504Neolamprologus_brichardi
ENSCVAG00000017892hdlbpa9672.473ENSNLEG00000031018-9975.532Nomascus_leucogenys
ENSCVAG00000017892hdlbpa9978.493ENSNLEG00000013818HDLBP9981.141Nomascus_leucogenys
ENSCVAG00000017892hdlbpa9984.300ENSMEUG00000008427HDLBP8884.300Notamacropus_eugenii
ENSCVAG00000017892hdlbpa9478.745ENSOPRG00000011965-9478.745Ochotona_princeps
ENSCVAG00000017892hdlbpa9974.115ENSODEG00000017391-10074.115Octodon_degus
ENSCVAG00000017892hdlbpa9978.285ENSODEG00000012313-10078.285Octodon_degus
ENSCVAG00000017892hdlbpa10092.380ENSONIG00000019272hdlbpa10092.537Oreochromis_niloticus
ENSCVAG00000017892hdlbpa6486.620ENSOANG00000021864-10086.620Ornithorhynchus_anatinus
ENSCVAG00000017892hdlbpa9979.560ENSOANG00000011759-10079.560Ornithorhynchus_anatinus
ENSCVAG00000017892hdlbpa9978.493ENSOCUG00000012667HDLBP10078.493Oryctolagus_cuniculus
ENSCVAG00000017892hdlbpa10091.491ENSORLG00000002226hdlbpa10091.725Oryzias_latipes
ENSCVAG00000017892hdlbpa10091.491ENSORLG00020007905hdlbpa9794.918Oryzias_latipes_hni
ENSCVAG00000017892hdlbpa10091.647ENSORLG00015004126hdlbpa10091.881Oryzias_latipes_hsok
ENSCVAG00000017892hdlbpa10089.272ENSOMEG00000000247hdlbpa9991.489Oryzias_melastigma
ENSCVAG00000017892hdlbpa9978.022ENSOGAG00000000738HDLBP10078.022Otolemur_garnettii
ENSCVAG00000017892hdlbpa9975.938ENSOARG00000017870HDLBP10075.938Ovis_aries
ENSCVAG00000017892hdlbpa9978.493ENSPPAG00000023318HDLBP9979.945Pan_paniscus
ENSCVAG00000017892hdlbpa9978.650ENSPPRG00000010215HDLBP10078.650Panthera_pardus
ENSCVAG00000017892hdlbpa9679.121ENSPTIG00000009328HDLBP9781.407Panthera_tigris_altaica
ENSCVAG00000017892hdlbpa9978.571ENSPTRG00000013121HDLBP9979.945Pan_troglodytes
ENSCVAG00000017892hdlbpa9978.571ENSPANG00000011832HDLBP9979.945Papio_anubis
ENSCVAG00000017892hdlbpa10087.127ENSPKIG00000002392hdlbpa10087.127Paramormyrops_kingsleyae
ENSCVAG00000017892hdlbpa9480.792ENSPSIG00000010068HDLBP10080.792Pelodiscus_sinensis
ENSCVAG00000017892hdlbpa10078.924ENSPMGG00000002102hdlbpa10078.924Periophthalmus_magnuspinnatus
ENSCVAG00000017892hdlbpa9979.121ENSPEMG00000017704Hdlbp10079.121Peromyscus_maniculatus_bairdii
ENSCVAG00000017892hdlbpa9979.544ENSPCIG00000015375HDLBP9479.544Phascolarctos_cinereus
ENSCVAG00000017892hdlbpa10095.519ENSPFOG00000000236hdlbpa10095.519Poecilia_formosa
ENSCVAG00000017892hdlbpa9595.262ENSPLAG00000006033hdlbpa10095.428Poecilia_latipinna
ENSCVAG00000017892hdlbpa10095.204ENSPMEG00000006627hdlbpa10095.362Poecilia_mexicana
ENSCVAG00000017892hdlbpa10068.990ENSPREG00000014450hdlbpa10068.990Poecilia_reticulata
ENSCVAG00000017892hdlbpa9978.414ENSPPYG00000013351HDLBP10078.414Pongo_abelii
ENSCVAG00000017892hdlbpa9974.448ENSPCAG00000011136HDLBP7974.448Procavia_capensis
ENSCVAG00000017892hdlbpa9968.186ENSPCOG00000021622HDLBP10068.186Propithecus_coquereli
ENSCVAG00000017892hdlbpa9977.752ENSPVAG00000000555HDLBP10077.752Pteropus_vampyrus
ENSCVAG00000017892hdlbpa10092.459ENSPNYG00000020753hdlbpa10092.616Pundamilia_nyererei
ENSCVAG00000017892hdlbpa10084.670ENSPNAG00000029610hdlbpa10084.670Pygocentrus_nattereri
ENSCVAG00000017892hdlbpa9744.194ENSRNOG00000031294RGD15631049844.194Rattus_norvegicus
ENSCVAG00000017892hdlbpa9341.483ENSRNOG00000042823RGD15612309341.352Rattus_norvegicus
ENSCVAG00000017892hdlbpa9978.885ENSRNOG00000031479Hdlbp10078.885Rattus_norvegicus
ENSCVAG00000017892hdlbpa9042.342ENSRNOG00000028847AABR07040251.110042.342Rattus_norvegicus
ENSCVAG00000017892hdlbpa9978.650ENSRBIG00000041381HDLBP10078.650Rhinopithecus_bieti
ENSCVAG00000017892hdlbpa9978.650ENSRROG00000034263HDLBP10078.650Rhinopithecus_roxellana
ENSCVAG00000017892hdlbpa9978.397ENSSBOG00000029714-9680.220Saimiri_boliviensis_boliviensis
ENSCVAG00000017892hdlbpa9269.828ENSSBOG00000033067-9669.603Saimiri_boliviensis_boliviensis
ENSCVAG00000017892hdlbpa9979.670ENSSHAG00000012422HDLBP10079.670Sarcophilus_harrisii
ENSCVAG00000017892hdlbpa10087.736ENSSFOG00015018627hdlbp10087.736Scleropages_formosus
ENSCVAG00000017892hdlbpa10091.342ENSSMAG00000002382hdlbpa10091.498Scophthalmus_maximus
ENSCVAG00000017892hdlbpa10092.706ENSSDUG00000022258hdlbpa10092.706Seriola_dumerili
ENSCVAG00000017892hdlbpa10092.627ENSSLDG00000004437hdlbpa10092.627Seriola_lalandi_dorsalis
ENSCVAG00000017892hdlbpa9467.869ENSSARG00000012639HDLBP9467.869Sorex_araneus
ENSCVAG00000017892hdlbpa9978.964ENSSPUG00000009182HDLBP10078.964Sphenodon_punctatus
ENSCVAG00000017892hdlbpa10092.857ENSSPAG00000009145hdlbpa10093.093Stegastes_partitus
ENSCVAG00000017892hdlbpa9977.865ENSSSCG00000016379HDLBP10078.173Sus_scrofa
ENSCVAG00000017892hdlbpa9582.150ENSTGUG00000006189HDLBP10082.150Taeniopygia_guttata
ENSCVAG00000017892hdlbpa10089.780ENSTRUG00000012148hdlbpa10089.780Takifugu_rubripes
ENSCVAG00000017892hdlbpa9989.428ENSTNIG00000004185hdlbpa10089.428Tetraodon_nigroviridis
ENSCVAG00000017892hdlbpa8872.956ENSTBEG00000001860HDLBP8872.956Tupaia_belangeri
ENSCVAG00000017892hdlbpa9980.623ENSTTRG00000015251HDLBP7780.623Tursiops_truncatus
ENSCVAG00000017892hdlbpa9978.728ENSUAMG00000018383HDLBP10079.316Ursus_americanus
ENSCVAG00000017892hdlbpa9978.650ENSUMAG00000010539HDLBP10078.650Ursus_maritimus
ENSCVAG00000017892hdlbpa9156.368ENSVPAG00000003112HDLBP9356.368Vicugna_pacos
ENSCVAG00000017892hdlbpa9479.741ENSVVUG00000022797HDLBP9979.741Vulpes_vulpes
ENSCVAG00000017892hdlbpa9978.056ENSXETG00000012164hdlbp9978.056Xenopus_tropicalis
ENSCVAG00000017892hdlbpa10093.858ENSXCOG00000005943hdlbpa10094.016Xiphophorus_couchianus
ENSCVAG00000017892hdlbpa10094.288ENSXMAG00000003787hdlbpa10094.444Xiphophorus_maculatus

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