EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000017940 (Gene tree)
Gene ID
107095954
Gene Symbol
ythdf1
Alias
fb49c02|wu:fb49c02|wu:fi19h06|wu:fj87f09|wu:fp06c11|zgc:55657
Full Name
YTH domain-containing family protein 1-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
16975 bases
Position
chrKL653087.1:3961-20935
Accession
107095954
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000029834YTHPF04146.155.9e-4111
ENSCVAP00000015175YTHPF04146.156.7e-4111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000031417-3448XM_015392349ENSCVAP00000015175615 (aa)XP_015247835UPI0007429405
ENSCVAT00000023180-1671-ENSCVAP00000029834556 (aa)--
Gene Model
Click here to download ENSCVAG00000017940's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000017940's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000017940ythdf19762.182ENSCVAG00000015233ythdf29660.650
ENSCVAG00000017940ythdf19480.418ENSCVAG00000014378YTHDF19880.483
ENSCVAG00000017940ythdf19760.000ENSCVAG00000018114ythdf39659.818
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000017940ythdf19771.786ENSG00000149658YTHDF19970.848Homo_sapiens
ENSCVAG00000017940ythdf110088.710ENSAPOG00000004358ythdf110088.710Acanthochromis_polyacanthus
ENSCVAG00000017940ythdf19975.884ENSAPOG00000010796YTHDF19978.634Acanthochromis_polyacanthus
ENSCVAG00000017940ythdf19571.985ENSAMEG00000017323YTHDF19572.000Ailuropoda_melanoleuca
ENSCVAG00000017940ythdf19685.219ENSACIG00000011264ythdf19985.968Amphilophus_citrinellus
ENSCVAG00000017940ythdf19679.745ENSACIG00000020083YTHDF19979.537Amphilophus_citrinellus
ENSCVAG00000017940ythdf19679.266ENSAOCG00000012567YTHDF19979.032Amphiprion_ocellaris
ENSCVAG00000017940ythdf110089.661ENSAOCG00000022251ythdf110089.338Amphiprion_ocellaris
ENSCVAG00000017940ythdf110089.661ENSAPEG00000021878ythdf110089.338Amphiprion_percula
ENSCVAG00000017940ythdf19679.450ENSAPEG00000008750YTHDF19979.211Amphiprion_percula
ENSCVAG00000017940ythdf110088.817ENSATEG00000023840ythdf110088.493Anabas_testudineus
ENSCVAG00000017940ythdf19679.342ENSATEG00000005996YTHDF19979.286Anabas_testudineus
ENSCVAG00000017940ythdf19572.593ENSAPLG00000005985YTHDF19672.678Anas_platyrhynchos
ENSCVAG00000017940ythdf19771.914ENSACAG00000005560YTHDF19971.303Anolis_carolinensis
ENSCVAG00000017940ythdf19859.683ENSANAG00000021022-9960.177Aotus_nancymaae
ENSCVAG00000017940ythdf19771.250ENSANAG00000034786-9971.681Aotus_nancymaae
ENSCVAG00000017940ythdf19679.450ENSACLG00000025518YTHDF19979.211Astatotilapia_calliptera
ENSCVAG00000017940ythdf19669.094ENSBTAG00000010383YTHDF19969.312Bos_taurus
ENSCVAG00000017940ythdf19769.788ENSCJAG00000010056YTHDF19970.973Callithrix_jacchus
ENSCVAG00000017940ythdf18971.203ENSCAFG00000012772YTHDF19871.622Canis_familiaris
ENSCVAG00000017940ythdf18971.203ENSCAFG00020001214YTHDF19871.622Canis_lupus_dingo
ENSCVAG00000017940ythdf19668.917ENSCHIG00000026494YTHDF19969.381Capra_hircus
ENSCVAG00000017940ythdf19572.778ENSTSYG00000033436YTHDF19672.445Carlito_syrichta
ENSCVAG00000017940ythdf19871.223ENSCAPG00000002544YTHDF19370.863Cavia_aperea
ENSCVAG00000017940ythdf19770.377ENSCPOG00000010202YTHDF19970.088Cavia_porcellus
ENSCVAG00000017940ythdf19771.403ENSCCAG00000024650YTHDF19970.619Cebus_capucinus
ENSCVAG00000017940ythdf19771.429ENSCATG00000033272YTHDF19971.025Cercocebus_atys
ENSCVAG00000017940ythdf19771.532ENSCLAG00000005989YTHDF19971.201Chinchilla_lanigera
ENSCVAG00000017940ythdf19771.429ENSCSAG00000016266YTHDF19971.025Chlorocebus_sabaeus
ENSCVAG00000017940ythdf19773.070ENSCPBG00000027183YTHDF19971.809Chrysemys_picta_bellii
ENSCVAG00000017940ythdf19572.694ENSCANG00000029082YTHDF19572.263Colobus_angolensis_palliatus
ENSCVAG00000017940ythdf19970.224ENSCGRG00001016568Ythdf19970.671Cricetulus_griseus_chok1gshd
ENSCVAG00000017940ythdf19572.509ENSCGRG00000009207Ythdf19771.898Cricetulus_griseus_crigri
ENSCVAG00000017940ythdf19685.740ENSCSEG00000020623YTHDF19985.943Cynoglossus_semilaevis
ENSCVAG00000017940ythdf19979.612ENSDARG00000016447ythdf19979.871Danio_rerio
ENSCVAG00000017940ythdf19769.929ENSDNOG00000043590YTHDF19970.423Dasypus_novemcinctus
ENSCVAG00000017940ythdf19570.926ENSDORG00000002879Ythdf19270.932Dipodomys_ordii
ENSCVAG00000017940ythdf17757.534ENSETEG00000017860-9858.503Echinops_telfairi
ENSCVAG00000017940ythdf19971.053ENSEASG00005023186YTHDF19971.150Equus_asinus_asinus
ENSCVAG00000017940ythdf19871.454ENSECAG00000019475YTHDF19872.039Equus_caballus
ENSCVAG00000017940ythdf19071.984ENSEEUG00000007461YTHDF19871.209Erinaceus_europaeus
ENSCVAG00000017940ythdf19881.855ENSELUG00000001906YTHDF19877.547Esox_lucius
ENSCVAG00000017940ythdf19981.260ENSELUG00000022768ythdf19981.906Esox_lucius
ENSCVAG00000017940ythdf19670.344ENSFCAG00000008917YTHDF19970.495Felis_catus
ENSCVAG00000017940ythdf19771.583ENSFALG00000010463YTHDF19971.277Ficedula_albicollis
ENSCVAG00000017940ythdf19871.196ENSFDAG00000019602YTHDF19970.370Fukomys_damarensis
ENSCVAG00000017940ythdf19481.594ENSFHEG00000002540YTHDF19880.847Fundulus_heteroclitus
ENSCVAG00000017940ythdf110094.146ENSFHEG00000023218ythdf110092.683Fundulus_heteroclitus
ENSCVAG00000017940ythdf19978.837ENSGMOG00000019610ythdf19978.862Gadus_morhua
ENSCVAG00000017940ythdf19771.147ENSGALG00000005745YTHDF19971.252Gallus_gallus
ENSCVAG00000017940ythdf19975.000ENSGAFG00000021100YTHDF19879.926Gambusia_affinis
ENSCVAG00000017940ythdf19876.541ENSGACG00000002613YTHDF19975.856Gasterosteus_aculeatus
ENSCVAG00000017940ythdf19984.967ENSGACG00000012014ythdf19985.131Gasterosteus_aculeatus
ENSCVAG00000017940ythdf19772.711ENSGAGG00000003007YTHDF19971.631Gopherus_agassizii
ENSCVAG00000017940ythdf19773.056ENSGGOG00000008340YTHDF19970.848Gorilla_gorilla
ENSCVAG00000017940ythdf19987.928ENSHBUG00000011284ythdf19788.254Haplochromis_burtoni
ENSCVAG00000017940ythdf19679.266ENSHBUG00000004875YTHDF19979.032Haplochromis_burtoni
ENSCVAG00000017940ythdf19771.351ENSHGLG00000006585YTHDF19971.099Heterocephalus_glaber_female
ENSCVAG00000017940ythdf19771.351ENSHGLG00100004683YTHDF19971.099Heterocephalus_glaber_male
ENSCVAG00000017940ythdf19785.810ENSHCOG00000008866ythdf19985.810Hippocampus_comes
ENSCVAG00000017940ythdf19974.720ENSHCOG00000011303YTHDF19878.161Hippocampus_comes
ENSCVAG00000017940ythdf19581.648ENSIPUG00000000425Ythdf19680.776Ictalurus_punctatus
ENSCVAG00000017940ythdf19572.171ENSSTOG00000023001YTHDF19772.545Ictidomys_tridecemlineatus
ENSCVAG00000017940ythdf19772.000ENSJJAG00000013589Ythdf19771.688Jaculus_jaculus
ENSCVAG00000017940ythdf19481.179ENSKMAG00000017472YTHDF19880.112Kryptolebias_marmoratus
ENSCVAG00000017940ythdf110090.407ENSKMAG00000005595ythdf110090.407Kryptolebias_marmoratus
ENSCVAG00000017940ythdf19975.000ENSLBEG00000012068YTHDF19977.233Labrus_bergylta
ENSCVAG00000017940ythdf110088.943ENSLBEG00000014105ythdf110088.943Labrus_bergylta
ENSCVAG00000017940ythdf19770.053ENSLACG00000014195YTHDF19872.202Latimeria_chalumnae
ENSCVAG00000017940ythdf19872.997ENSLOCG00000005020ythdf19970.947Lepisosteus_oculatus
ENSCVAG00000017940ythdf19771.836ENSLAFG00000008884YTHDF19971.178Loxodonta_africana
ENSCVAG00000017940ythdf19771.429ENSMFAG00000042868YTHDF19971.025Macaca_fascicularis
ENSCVAG00000017940ythdf19872.482ENSMMUG00000009227YTHDF19971.025Macaca_mulatta
ENSCVAG00000017940ythdf19771.429ENSMNEG00000030851YTHDF19971.025Macaca_nemestrina
ENSCVAG00000017940ythdf19772.909ENSMLEG00000009252YTHDF19772.445Mandrillus_leucophaeus
ENSCVAG00000017940ythdf110087.682ENSMAMG00000024255ythdf110087.358Mastacembelus_armatus
ENSCVAG00000017940ythdf19679.817ENSMAMG00000011072YTHDF19979.323Mastacembelus_armatus
ENSCVAG00000017940ythdf19679.266ENSMZEG00005023596YTHDF19979.032Maylandia_zebra
ENSCVAG00000017940ythdf110088.006ENSMZEG00005026397ythdf110088.331Maylandia_zebra
ENSCVAG00000017940ythdf19572.407ENSMGAG00000006139YTHDF19572.495Meleagris_gallopavo
ENSCVAG00000017940ythdf19871.708ENSMAUG00000017660Ythdf19971.071Mesocricetus_auratus
ENSCVAG00000017940ythdf19770.736ENSMICG00000032266YTHDF19970.671Microcebus_murinus
ENSCVAG00000017940ythdf19770.318ENSMOCG00000013573Ythdf19970.671Microtus_ochrogaster
ENSCVAG00000017940ythdf19585.135ENSMMOG00000017500ythdf19784.768Mola_mola
ENSCVAG00000017940ythdf19975.441ENSMMOG00000020467YTHDF19974.677Mola_mola
ENSCVAG00000017940ythdf18971.709ENSMODG00000016842YTHDF19872.201Monodelphis_domestica
ENSCVAG00000017940ythdf110086.312ENSMALG00000015672ythdf110086.957Monopterus_albus
ENSCVAG00000017940ythdf19975.321ENSMALG00000022209YTHDF19977.265Monopterus_albus
ENSCVAG00000017940ythdf19771.071MGP_CAROLIEiJ_G0024790Ythdf19970.495Mus_caroli
ENSCVAG00000017940ythdf19771.071ENSMUSG00000038848Ythdf19970.495Mus_musculus
ENSCVAG00000017940ythdf19771.071MGP_PahariEiJ_G0026237Ythdf19970.495Mus_pahari
ENSCVAG00000017940ythdf19771.071MGP_SPRETEiJ_G0025715Ythdf19970.495Mus_spretus
ENSCVAG00000017940ythdf18969.565ENSMPUG00000008111YTHDF19868.872Mustela_putorius_furo
ENSCVAG00000017940ythdf19672.131ENSMLUG00000002241YTHDF19671.043Myotis_lucifugus
ENSCVAG00000017940ythdf19771.250ENSNGAG00000000334Ythdf19971.201Nannospalax_galili
ENSCVAG00000017940ythdf19679.266ENSNBRG00000015321YTHDF19979.032Neolamprologus_brichardi
ENSCVAG00000017940ythdf19588.396ENSNBRG00000008213ythdf19888.796Neolamprologus_brichardi
ENSCVAG00000017940ythdf19568.480ENSOPRG00000001758-9967.412Ochotona_princeps
ENSCVAG00000017940ythdf18576.126ENSODEG00000000074-9758.363Octodon_degus
ENSCVAG00000017940ythdf19969.982ENSODEG00000004380-9970.141Octodon_degus
ENSCVAG00000017940ythdf19587.201ENSONIG00000016799ythdf19988.183Oreochromis_niloticus
ENSCVAG00000017940ythdf19771.377ENSOANG00000003723YTHDF19971.781Ornithorhynchus_anatinus
ENSCVAG00000017940ythdf17786.957ENSOCUG00000012780YTHDF19966.667Oryctolagus_cuniculus
ENSCVAG00000017940ythdf19975.240ENSORLG00000009739YTHDF19878.022Oryzias_latipes
ENSCVAG00000017940ythdf110087.682ENSORLG00000014665YTHDF110086.548Oryzias_latipes
ENSCVAG00000017940ythdf110088.149ENSORLG00020000307ythdf110087.175Oryzias_latipes_hni
ENSCVAG00000017940ythdf19975.929ENSORLG00020001332YTHDF19878.165Oryzias_latipes_hni
ENSCVAG00000017940ythdf19974.920ENSORLG00015018321YTHDF19877.656Oryzias_latipes_hsok
ENSCVAG00000017940ythdf110087.987ENSORLG00015006302ythdf110087.013Oryzias_latipes_hsok
ENSCVAG00000017940ythdf110089.106ENSOMEG00000002941YTHDF110088.780Oryzias_melastigma
ENSCVAG00000017940ythdf19976.367ENSOMEG00000011843YTHDF19975.161Oryzias_melastigma
ENSCVAG00000017940ythdf19770.483ENSOGAG00000000480YTHDF19970.723Otolemur_garnettii
ENSCVAG00000017940ythdf19470.398ENSOARG00000011639YTHDF19568.431Ovis_aries
ENSCVAG00000017940ythdf19773.056ENSPPAG00000023277YTHDF19772.263Pan_paniscus
ENSCVAG00000017940ythdf19670.758ENSPPRG00000020805YTHDF19971.201Panthera_pardus
ENSCVAG00000017940ythdf19469.333ENSPTIG00000017355YTHDF19278.243Panthera_tigris_altaica
ENSCVAG00000017940ythdf19773.056ENSPTRG00000013730YTHDF19970.848Pan_troglodytes
ENSCVAG00000017940ythdf19771.429ENSPANG00000021472YTHDF19971.025Papio_anubis
ENSCVAG00000017940ythdf19872.997ENSPKIG00000005026YTHDF19972.049Paramormyrops_kingsleyae
ENSCVAG00000017940ythdf19871.986ENSPKIG00000005427ythdf19970.766Paramormyrops_kingsleyae
ENSCVAG00000017940ythdf19772.958ENSPSIG00000005529YTHDF19572.860Pelodiscus_sinensis
ENSCVAG00000017940ythdf19681.770ENSPMGG00000015328ythdf19884.906Periophthalmus_magnuspinnatus
ENSCVAG00000017940ythdf19478.571ENSPMGG00000009101YTHDF19878.010Periophthalmus_magnuspinnatus
ENSCVAG00000017940ythdf19772.364ENSPEMG00000020199Ythdf19971.898Peromyscus_maniculatus_bairdii
ENSCVAG00000017940ythdf19871.378ENSPCIG00000017170YTHDF19872.780Phascolarctos_cinereus
ENSCVAG00000017940ythdf110093.496ENSPFOG00000005405ythdf110093.659Poecilia_formosa
ENSCVAG00000017940ythdf110093.496ENSPLAG00000006653ythdf110093.659Poecilia_latipinna
ENSCVAG00000017940ythdf19974.603ENSPLAG00000006298YTHDF19975.120Poecilia_latipinna
ENSCVAG00000017940ythdf110093.182ENSPMEG00000023753ythdf110093.019Poecilia_mexicana
ENSCVAG00000017940ythdf19974.603ENSPMEG00000020969-9977.878Poecilia_mexicana
ENSCVAG00000017940ythdf110093.984ENSPREG00000002173ythdf110094.146Poecilia_reticulata
ENSCVAG00000017940ythdf19776.298ENSPREG00000017662YTHDF19875.793Poecilia_reticulata
ENSCVAG00000017940ythdf18386.294ENSPPYG00000011226YTHDF19888.776Pongo_abelii
ENSCVAG00000017940ythdf19069.548ENSPCAG00000002452YTHDF110068.714Procavia_capensis
ENSCVAG00000017940ythdf19770.536ENSPCOG00000025969YTHDF19971.025Propithecus_coquereli
ENSCVAG00000017940ythdf19767.528ENSPVAG00000017568YTHDF19668.324Pteropus_vampyrus
ENSCVAG00000017940ythdf19679.266ENSPNYG00000002266YTHDF19979.032Pundamilia_nyererei
ENSCVAG00000017940ythdf19987.928ENSPNYG00000014007ythdf19788.254Pundamilia_nyererei
ENSCVAG00000017940ythdf19979.545ENSPNAG00000012447ythdf19980.032Pygocentrus_nattereri
ENSCVAG00000017940ythdf19771.071ENSRNOG00000027015Ythdf19970.671Rattus_norvegicus
ENSCVAG00000017940ythdf19572.140ENSRBIG00000044959YTHDF19571.533Rhinopithecus_bieti
ENSCVAG00000017940ythdf19770.536ENSRROG00000033014YTHDF19571.533Rhinopithecus_roxellana
ENSCVAG00000017940ythdf19571.402ENSSBOG00000027278YTHDF19870.680Saimiri_boliviensis_boliviensis
ENSCVAG00000017940ythdf19572.407ENSSHAG00000010430YTHDF18573.455Sarcophilus_harrisii
ENSCVAG00000017940ythdf19874.609ENSSFOG00015000284ythdf19973.171Scleropages_formosus
ENSCVAG00000017940ythdf19782.591ENSSMAG00000007635YTHDF19577.933Scophthalmus_maximus
ENSCVAG00000017940ythdf18092.398ENSSMAG00000013715ythdf19394.410Scophthalmus_maximus
ENSCVAG00000017940ythdf19480.835ENSSDUG00000015823YTHDF19580.112Seriola_dumerili
ENSCVAG00000017940ythdf110088.548ENSSDUG00000000435ythdf110089.194Seriola_dumerili
ENSCVAG00000017940ythdf19988.169ENSSLDG00000024948ythdf19988.817Seriola_lalandi_dorsalis
ENSCVAG00000017940ythdf19973.899ENSSLDG00000001054YTHDF19292.308Seriola_lalandi_dorsalis
ENSCVAG00000017940ythdf18971.400ENSSPUG00000015143YTHDF19872.093Sphenodon_punctatus
ENSCVAG00000017940ythdf19975.911ENSSPAG00000003666YTHDF19978.330Stegastes_partitus
ENSCVAG00000017940ythdf110088.019ENSSPAG00000014989ythdf110087.700Stegastes_partitus
ENSCVAG00000017940ythdf19770.144ENSSSCG00000040086YTHDF19969.110Sus_scrofa
ENSCVAG00000017940ythdf19572.407ENSTGUG00000007565YTHDF19772.313Taeniopygia_guttata
ENSCVAG00000017940ythdf19574.747ENSTRUG00000005049YTHDF19974.551Takifugu_rubripes
ENSCVAG00000017940ythdf19586.689ENSTRUG00000004288ythdf19986.477Takifugu_rubripes
ENSCVAG00000017940ythdf19679.856ENSTNIG00000012490ythdf19980.634Tetraodon_nigroviridis
ENSCVAG00000017940ythdf19675.735ENSTNIG00000003975YTHDF19975.360Tetraodon_nigroviridis
ENSCVAG00000017940ythdf19870.141ENSTTRG00000001804YTHDF19969.542Tursiops_truncatus
ENSCVAG00000017940ythdf19572.542ENSUAMG00000011021YTHDF19871.429Ursus_americanus
ENSCVAG00000017940ythdf18970.898ENSUMAG00000022290YTHDF19871.236Ursus_maritimus
ENSCVAG00000017940ythdf18971.203ENSVVUG00000015275YTHDF19871.429Vulpes_vulpes
ENSCVAG00000017940ythdf19771.886ENSXETG00000027086ythdf19672.222Xenopus_tropicalis
ENSCVAG00000017940ythdf19775.820ENSXCOG00000008115YTHDF19975.083Xiphophorus_couchianus
ENSCVAG00000017940ythdf19991.950ENSXCOG00000002490ythdf19691.950Xiphophorus_couchianus
ENSCVAG00000017940ythdf110092.195ENSXMAG00000008525ythdf110092.195Xiphophorus_maculatus
ENSCVAG00000017940ythdf19480.989ENSXMAG00000015644YTHDF19880.297Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us