EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCVAG00000018034 (Gene tree)
Gene ID
107091406
Gene Symbol
-
Alias
-
Full Name
lysine rich coiled-coil 1
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
11511 bases
Position
chrKL652835.1:101627-113137
Accession
107091406
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000015254zf-metPF12874.77.6e-2113
ENSCVAP00000015254zf-metPF12874.77.6e-2123
ENSCVAP00000015254zf-metPF12874.77.6e-2133
ENSCVAP00000015256zf-metPF12874.79.1e-2113
ENSCVAP00000015256zf-metPF12874.79.1e-2123
ENSCVAP00000015256zf-metPF12874.79.1e-2133
ENSCVAP00000015256zf-C2H2_jazPF12171.81.4e-1411
ENSCVAP00000015254zf-C2H2_jazPF12171.81.4e-1411
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000031448-2734-ENSCVAP00000015256534 (aa)--
ENSCVAT00000023301-2647XM_015385316ENSCVAP00000015254505 (aa)XP_015240802-
Gene Model
Click here to download ENSCVAG00000018034's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018034's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000018034-6552.616ENSAPOG00000002875-9948.333Acanthochromis_polyacanthus
ENSCVAG00000018034-6651.149ENSAOCG00000007093-9545.181Amphiprion_ocellaris
ENSCVAG00000018034-9841.276ENSATEG00000023589-8744.567Anabas_testudineus
ENSCVAG00000018034-9742.992ENSACLG00000012751-8645.489Astatotilapia_calliptera
ENSCVAG00000018034-6540.169ENSELUG00000010589-8838.069Esox_lucius
ENSCVAG00000018034-7236.951ENSGMOG00000008972-8536.872Gadus_morhua
ENSCVAG00000018034-9139.709ENSGACG00000009018-10044.215Gasterosteus_aculeatus
ENSCVAG00000018034-6548.961ENSHBUG00000020963-8745.403Haplochromis_burtoni
ENSCVAG00000018034-9538.370ENSHCOG00000013075-9940.954Hippocampus_comes
ENSCVAG00000018034-9736.399ENSIPUG00000011933-8837.853Ictalurus_punctatus
ENSCVAG00000018034-9742.726ENSLBEG00000027221-8543.068Labrus_bergylta
ENSCVAG00000018034-9742.803ENSMZEG00005026847-8645.301Maylandia_zebra
ENSCVAG00000018034-6747.472ENSMMOG00000012396-8445.695Mola_mola
ENSCVAG00000018034-5951.299ENSMALG00000002560-9746.881Monopterus_albus
ENSCVAG00000018034-5432.911ENSOCUG00000013360ZNF3466032.911Oryctolagus_cuniculus
ENSCVAG00000018034-5039.416ENSPNAG00000006731-8833.844Pygocentrus_nattereri
ENSCVAG00000018034-6849.856ENSSMAG00000009994-10044.712Scophthalmus_maximus
ENSCVAG00000018034-6650.000ENSSDUG00000022406-8745.018Seriola_dumerili
ENSCVAG00000018034-6051.757ENSSPAG00000018876-9848.330Stegastes_partitus

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