EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018094 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 711 bases
Position: chrKL654688.1:8287-8997
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015311	MMR_HSR1	PF01926.23	1.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023373	-	711	-	ENSCVAP00000015311	236 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000018094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018094's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018094	-	75	49.438	ENSCVAG00000000472	-	67	49.153
ENSCVAG00000018094	-	70	53.939	ENSCVAG00000011026	-	60	54.717
ENSCVAG00000018094	-	76	85.556	ENSCVAG00000011039	-	60	85.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018094	-	78	40.761	ENSG00000124449	IRGC	66	40.761	Homo_sapiens
ENSCVAG00000018094	-	75	58.791	ENSAPOG00000008330	irgf3	50	55.051	Acanthochromis_polyacanthus
ENSCVAG00000018094	-	72	55.294	ENSACIG00000014652	-	66	55.294	Amphilophus_citrinellus
ENSCVAG00000018094	-	70	62.048	ENSACIG00000008165	-	65	62.048	Amphilophus_citrinellus
ENSCVAG00000018094	-	86	50.242	ENSACIG00000010992	-	88	50.242	Amphilophus_citrinellus
ENSCVAG00000018094	-	70	56.970	ENSACIG00000000621	-	63	56.970	Amphilophus_citrinellus
ENSCVAG00000018094	-	67	62.264	ENSACIG00000023724	-	67	61.446	Amphilophus_citrinellus
ENSCVAG00000018094	-	84	58.209	ENSAOCG00000012267	-	73	58.209	Amphiprion_ocellaris
ENSCVAG00000018094	-	63	63.514	ENSAPEG00000002648	-	83	63.514	Amphiprion_percula
ENSCVAG00000018094	-	69	57.055	ENSATEG00000011665	-	62	57.055	Anabas_testudineus
ENSCVAG00000018094	-	83	52.792	ENSATEG00000011733	-	75	56.354	Anabas_testudineus
ENSCVAG00000018094	-	79	55.080	ENSATEG00000011805	-	61	59.880	Anabas_testudineus
ENSCVAG00000018094	-	77	54.396	ENSACLG00000017575	-	62	54.396	Astatotilapia_calliptera
ENSCVAG00000018094	-	68	63.125	ENSACLG00000017807	-	88	63.125	Astatotilapia_calliptera
ENSCVAG00000018094	-	86	50.962	ENSACLG00000008069	-	77	55.307	Astatotilapia_calliptera
ENSCVAG00000018094	-	75	55.618	ENSACLG00000026716	-	60	55.618	Astatotilapia_calliptera
ENSCVAG00000018094	-	67	59.748	ENSACLG00000026694	-	64	59.494	Astatotilapia_calliptera
ENSCVAG00000018094	-	89	44.240	ENSAMXG00000025169	-	58	44.700	Astyanax_mexicanus
ENSCVAG00000018094	-	74	37.931	ENSAMXG00000001283	-	62	37.931	Astyanax_mexicanus
ENSCVAG00000018094	-	79	46.524	ENSAMXG00000043797	-	74	46.524	Astyanax_mexicanus
ENSCVAG00000018094	-	55	53.488	ENSAMXG00000037767	-	55	42.000	Astyanax_mexicanus
ENSCVAG00000018094	-	85	43.269	ENSAMXG00000018938	-	54	43.269	Astyanax_mexicanus
ENSCVAG00000018094	-	85	46.635	ENSAMXG00000041276	-	51	46.635	Astyanax_mexicanus
ENSCVAG00000018094	-	85	44.076	ENSAMXG00000031909	-	57	44.550	Astyanax_mexicanus
ENSCVAG00000018094	-	66	42.949	ENSCHOG00000005921	-	62	42.949	Choloepus_hoffmanni
ENSCVAG00000018094	-	91	38.655	ENSCPBG00000013135	-	57	38.655	Chrysemys_picta_bellii
ENSCVAG00000018094	-	80	43.915	ENSCPBG00000021939	-	80	46.914	Chrysemys_picta_bellii
ENSCVAG00000018094	-	82	47.283	ENSCPBG00000021464	-	56	47.283	Chrysemys_picta_bellii
ENSCVAG00000018094	-	71	46.429	ENSCPBG00000006680	-	87	46.429	Chrysemys_picta_bellii
ENSCVAG00000018094	-	80	42.786	ENSDARG00000070317	irge4	52	42.786	Danio_rerio
ENSCVAG00000018094	-	79	43.719	ENSDARG00000102281	CR391937.1	53	43.719	Danio_rerio
ENSCVAG00000018094	-	79	71.658	ENSFHEG00000008542	-	76	71.658	Fundulus_heteroclitus
ENSCVAG00000018094	-	78	59.732	ENSGMOG00000000661	-	62	60.959	Gadus_morhua
ENSCVAG00000018094	-	69	56.442	ENSGMOG00000014685	-	55	57.595	Gadus_morhua
ENSCVAG00000018094	-	86	39.906	ENSGAGG00000002085	-	52	39.906	Gopherus_agassizii
ENSCVAG00000018094	-	76	45.652	ENSGAGG00000011615	-	80	45.652	Gopherus_agassizii
ENSCVAG00000018094	-	72	44.444	ENSGAGG00000002093	-	75	44.444	Gopherus_agassizii
ENSCVAG00000018094	-	83	56.853	ENSHBUG00000004954	-	50	56.853	Haplochromis_burtoni
ENSCVAG00000018094	-	76	57.542	ENSHBUG00000016080	-	84	57.542	Haplochromis_burtoni
ENSCVAG00000018094	-	86	51.471	ENSHBUG00000020228	-	81	51.471	Haplochromis_burtoni
ENSCVAG00000018094	-	83	54.774	ENSHBUG00000008052	-	77	53.535	Haplochromis_burtoni
ENSCVAG00000018094	-	70	63.253	ENSHBUG00000007885	-	68	58.947	Haplochromis_burtoni
ENSCVAG00000018094	-	89	49.302	ENSHBUG00000006242	-	52	49.302	Haplochromis_burtoni
ENSCVAG00000018094	-	65	55.844	ENSHBUG00000004969	-	91	55.844	Haplochromis_burtoni
ENSCVAG00000018094	-	77	58.791	ENSHBUG00000023667	-	72	58.791	Haplochromis_burtoni
ENSCVAG00000018094	-	87	47.826	ENSIPUG00000019872	IRGC	50	47.826	Ictalurus_punctatus
ENSCVAG00000018094	-	74	38.202	ENSIPUG00000012630	-	63	38.202	Ictalurus_punctatus
ENSCVAG00000018094	-	87	47.343	ENSIPUG00000019864	-	50	47.343	Ictalurus_punctatus
ENSCVAG00000018094	-	66	45.223	ENSJJAG00000023378	-	63	48.810	Jaculus_jaculus
ENSCVAG00000018094	-	85	54.726	ENSKMAG00000003219	-	50	54.726	Kryptolebias_marmoratus
ENSCVAG00000018094	-	89	52.857	ENSKMAG00000003298	-	52	52.857	Kryptolebias_marmoratus
ENSCVAG00000018094	-	86	54.187	ENSKMAG00000003305	-	50	54.187	Kryptolebias_marmoratus
ENSCVAG00000018094	-	89	52.632	ENSLBEG00000005277	-	81	52.632	Labrus_bergylta
ENSCVAG00000018094	-	75	60.000	ENSLBEG00000024117	-	69	57.143	Labrus_bergylta
ENSCVAG00000018094	-	91	53.953	ENSLBEG00000005157	-	75	53.953	Labrus_bergylta
ENSCVAG00000018094	-	88	52.404	ENSLBEG00000014554	-	93	52.404	Labrus_bergylta
ENSCVAG00000018094	-	69	54.601	ENSLBEG00000014225	-	91	54.601	Labrus_bergylta
ENSCVAG00000018094	-	75	55.932	ENSLBEG00000014433	-	69	56.571	Labrus_bergylta
ENSCVAG00000018094	-	78	53.763	ENSLBEG00000010876	-	51	53.763	Labrus_bergylta
ENSCVAG00000018094	-	82	49.057	ENSLACG00000016534	-	51	49.057	Latimeria_chalumnae
ENSCVAG00000018094	-	83	43.284	ENSLACG00000005910	-	60	43.284	Latimeria_chalumnae
ENSCVAG00000018094	-	84	43.062	ENSLACG00000002961	-	54	43.062	Latimeria_chalumnae
ENSCVAG00000018094	-	78	35.484	ENSLACG00000006215	-	72	33.641	Latimeria_chalumnae
ENSCVAG00000018094	-	82	48.223	ENSMZEG00005027732	-	51	48.223	Maylandia_zebra
ENSCVAG00000018094	-	70	59.639	ENSMZEG00005027730	-	65	59.639	Maylandia_zebra
ENSCVAG00000018094	-	66	57.419	ENSMZEG00005027736	-	91	57.419	Maylandia_zebra
ENSCVAG00000018094	-	83	46.734	ENSMZEG00005027737	-	74	46.734	Maylandia_zebra
ENSCVAG00000018094	-	83	56.784	ENSMZEG00005013284	-	78	56.784	Maylandia_zebra
ENSCVAG00000018094	-	83	53.030	ENSMZEG00005027728	-	50	53.030	Maylandia_zebra
ENSCVAG00000018094	-	90	54.706	ENSMZEG00005003870	-	51	53.917	Maylandia_zebra
ENSCVAG00000018094	-	77	54.396	ENSMZEG00005027717	-	66	54.396	Maylandia_zebra
ENSCVAG00000018094	-	64	40.789	ENSMOCG00000002764	-	72	40.789	Microtus_ochrogaster
ENSCVAG00000018094	-	76	44.444	ENSMMOG00000018247	irgf3	58	47.590	Mola_mola
ENSCVAG00000018094	-	71	34.731	MGP_CAROLIEiJ_G0016256	Irgm1	56	34.731	Mus_caroli
ENSCVAG00000018094	-	67	41.772	ENSMUSG00000078920	Ifi47	76	40.789	Mus_musculus
ENSCVAG00000018094	-	72	43.275	ENSMUSG00000078922	Tgtp1	70	42.391	Mus_musculus
ENSCVAG00000018094	-	67	48.125	ENSMUSG00000069893	9930111J21Rik1	53	39.394	Mus_musculus
ENSCVAG00000018094	-	67	47.500	ENSMUSG00000069892	9930111J21Rik2	53	39.394	Mus_musculus
ENSCVAG00000018094	-	67	46.584	MGP_PahariEiJ_G0017404	-	67	45.455	Mus_pahari
ENSCVAG00000018094	-	72	35.503	MGP_PahariEiJ_G0017392	Irgm1	56	35.503	Mus_pahari
ENSCVAG00000018094	-	65	37.013	MGP_SPRETEiJ_G0017097	Irgm1	52	37.013	Mus_spretus
ENSCVAG00000018094	-	68	40.491	MGP_SPRETEiJ_G0017099	9930111J21Rik2	67	43.443	Mus_spretus
ENSCVAG00000018094	-	67	61.392	ENSNBRG00000007782	-	73	61.392	Neolamprologus_brichardi
ENSCVAG00000018094	-	79	57.368	ENSNBRG00000007806	-	70	57.368	Neolamprologus_brichardi
ENSCVAG00000018094	-	64	65.132	ENSNBRG00000000314	-	63	65.132	Neolamprologus_brichardi
ENSCVAG00000018094	-	67	57.595	ENSNBRG00000012048	-	85	57.595	Neolamprologus_brichardi
ENSCVAG00000018094	-	81	59.877	ENSNBRG00000007953	-	56	51.415	Neolamprologus_brichardi
ENSCVAG00000018094	-	75	55.866	ENSNBRG00000007712	-	64	55.866	Neolamprologus_brichardi
ENSCVAG00000018094	-	84	53.465	ENSNBRG00000022060	-	81	53.465	Neolamprologus_brichardi
ENSCVAG00000018094	-	72	57.895	ENSNBRG00000007654	-	70	57.895	Neolamprologus_brichardi
ENSCVAG00000018094	-	75	55.682	ENSNBRG00000008018	-	83	55.682	Neolamprologus_brichardi
ENSCVAG00000018094	-	64	63.333	ENSNBRG00000008076	-	81	63.333	Neolamprologus_brichardi
ENSCVAG00000018094	-	66	55.705	ENSNBRG00000022072	-	66	55.705	Neolamprologus_brichardi
ENSCVAG00000018094	-	75	59.322	ENSNBRG00000001731	-	86	59.322	Neolamprologus_brichardi
ENSCVAG00000018094	-	68	41.358	ENSOPRG00000004262	IRGC	53	41.358	Ochotona_princeps
ENSCVAG00000018094	-	87	48.571	ENSONIG00000011280	-	51	48.815	Oreochromis_niloticus
ENSCVAG00000018094	-	91	60.870	ENSONIG00000011733	-	52	60.870	Oreochromis_niloticus
ENSCVAG00000018094	-	80	41.579	ENSOANG00000001820	-	62	41.579	Ornithorhynchus_anatinus
ENSCVAG00000018094	-	69	41.463	ENSPKIG00000001724	IRGC	59	42.953	Paramormyrops_kingsleyae
ENSCVAG00000018094	-	63	48.667	ENSPSIG00000008699	-	52	48.667	Pelodiscus_sinensis
ENSCVAG00000018094	-	70	49.398	ENSPMGG00000023541	-	66	50.000	Periophthalmus_magnuspinnatus
ENSCVAG00000018094	-	76	48.066	ENSPMGG00000023020	-	73	48.066	Periophthalmus_magnuspinnatus
ENSCVAG00000018094	-	72	55.294	ENSPMGG00000022164	-	69	55.294	Periophthalmus_magnuspinnatus
ENSCVAG00000018094	-	67	46.250	ENSPEMG00000015679	-	55	39.130	Peromyscus_maniculatus_bairdii
ENSCVAG00000018094	-	92	66.667	ENSPLAG00000023485	-	68	66.667	Poecilia_latipinna
ENSCVAG00000018094	-	77	52.486	ENSPLAG00000016196	-	72	52.486	Poecilia_latipinna
ENSCVAG00000018094	-	89	67.299	ENSPMEG00000022363	-	53	67.299	Poecilia_mexicana
ENSCVAG00000018094	-	75	52.809	ENSPMEG00000011302	-	72	52.809	Poecilia_mexicana
ENSCVAG00000018094	-	82	65.979	ENSPREG00000004310	-	99	61.307	Poecilia_reticulata
ENSCVAG00000018094	-	89	46.919	ENSPREG00000010622	-	52	46.919	Poecilia_reticulata
ENSCVAG00000018094	-	68	62.500	ENSPNYG00000023680	-	85	62.500	Pundamilia_nyererei
ENSCVAG00000018094	-	79	52.688	ENSPNYG00000007188	-	76	52.688	Pundamilia_nyererei
ENSCVAG00000018094	-	77	53.846	ENSPNYG00000004835	-	70	53.846	Pundamilia_nyererei
ENSCVAG00000018094	-	79	61.250	ENSPNYG00000023728	-	75	61.250	Pundamilia_nyererei
ENSCVAG00000018094	-	63	66.443	ENSPNYG00000023912	-	57	66.443	Pundamilia_nyererei
ENSCVAG00000018094	-	68	51.250	ENSPNYG00000023816	-	89	50.909	Pundamilia_nyererei
ENSCVAG00000018094	-	78	57.979	ENSPNYG00000021508	-	68	57.979	Pundamilia_nyererei
ENSCVAG00000018094	-	72	57.310	ENSPNYG00000021714	-	62	57.310	Pundamilia_nyererei
ENSCVAG00000018094	-	72	57.059	ENSPNYG00000002560	-	51	52.261	Pundamilia_nyererei
ENSCVAG00000018094	-	91	33.632	ENSPNAG00000029024	-	82	37.019	Pygocentrus_nattereri
ENSCVAG00000018094	-	92	48.175	ENSPNAG00000000207	-	77	48.175	Pygocentrus_nattereri
ENSCVAG00000018094	-	84	39.713	ENSPNAG00000028650	-	55	39.713	Pygocentrus_nattereri
ENSCVAG00000018094	-	88	45.024	ENSPNAG00000002770	irgf2	51	45.024	Pygocentrus_nattereri
ENSCVAG00000018094	-	67	39.726	ENSPNAG00000023934	-	55	39.726	Pygocentrus_nattereri
ENSCVAG00000018094	-	92	41.150	ENSPNAG00000007452	-	60	41.150	Pygocentrus_nattereri
ENSCVAG00000018094	-	60	60.563	ENSSLDG00000014712	-	60	60.563	Seriola_lalandi_dorsalis
ENSCVAG00000018094	-	87	58.768	ENSSLDG00000014645	-	52	58.768	Seriola_lalandi_dorsalis
ENSCVAG00000018094	-	64	56.579	ENSSLDG00000006807	-	99	56.579	Seriola_lalandi_dorsalis
ENSCVAG00000018094	-	74	46.023	ENSSPUG00000015920	-	52	46.023	Sphenodon_punctatus
ENSCVAG00000018094	-	78	58.065	ENSSPAG00000007371	-	93	58.065	Stegastes_partitus
ENSCVAG00000018094	-	81	55.729	ENSSPAG00000006926	-	72	55.729	Stegastes_partitus
ENSCVAG00000018094	-	88	56.872	ENSSPAG00000020385	-	50	56.872	Stegastes_partitus
ENSCVAG00000018094	-	91	53.456	ENSSPAG00000001416	-	88	53.456	Stegastes_partitus
ENSCVAG00000018094	-	76	54.696	ENSTRUG00000001895	-	85	54.696	Takifugu_rubripes
ENSCVAG00000018094	-	81	54.922	ENSTRUG00000005821	-	74	54.922	Takifugu_rubripes
ENSCVAG00000018094	-	76	57.778	ENSTNIG00000000142	-	56	55.959	Tetraodon_nigroviridis
ENSCVAG00000018094	-	87	57.527	ENSTNIG00000000628	-	55	57.527	Tetraodon_nigroviridis
ENSCVAG00000018094	-	68	59.627	ENSTNIG00000000695	-	91	59.627	Tetraodon_nigroviridis