EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018104 (Gene tree)
Gene ID: 107100468
Gene Symbol: -
Alias: -
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 165900 bases
Position: chrKL653476.1:89574-255473
Accession: 107100468
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000029927	RRM_1	PF00076.22	1.4e-10	1	1
ENSCVAP00000015285	RRM_1	PF00076.22	1.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023380	-	984	XM_015398972	ENSCVAP00000029927	293 (aa)	XP_015254458	UPI000742C5F3
ENSCVAT00000023345	-	882	-	ENSCVAP00000015285	293 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000018104's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018104's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018104	-	74	59.375	ENSCVAG00000016981	-	66	57.456
ENSCVAG00000018104	-	100	72.635	ENSCVAG00000013624	-	100	72.635
ENSCVAG00000018104	-	74	53.363	ENSCVAG00000002797	-	98	45.033

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018104	-	100	73.311	ENSAPOG00000008744	-	100	72.635	Acanthochromis_polyacanthus
ENSCVAG00000018104	-	97	66.781	ENSACIG00000007143	-	97	66.781	Amphilophus_citrinellus
ENSCVAG00000018104	-	100	73.986	ENSAOCG00000023599	-	100	73.649	Amphiprion_ocellaris
ENSCVAG00000018104	-	100	94.539	ENSAOCG00000001605	-	100	93.515	Amphiprion_ocellaris
ENSCVAG00000018104	-	88	84.436	ENSATEG00000023356	-	87	92.035	Anabas_testudineus
ENSCVAG00000018104	-	97	66.443	ENSATEG00000022219	-	93	70.370	Anabas_testudineus
ENSCVAG00000018104	-	100	74.237	ENSACLG00000011720	-	100	73.898	Astatotilapia_calliptera
ENSCVAG00000018104	-	100	93.878	ENSACLG00000006949	-	100	92.517	Astatotilapia_calliptera
ENSCVAG00000018104	-	100	65.436	ENSAMXG00000032617	-	100	65.772	Astyanax_mexicanus
ENSCVAG00000018104	-	100	88.095	ENSAMXG00000019031	-	100	87.755	Astyanax_mexicanus
ENSCVAG00000018104	-	100	67.568	ENSCSEG00000014237	-	100	67.230	Cynoglossus_semilaevis
ENSCVAG00000018104	-	58	77.193	ENSDARG00000090292	ralyl	81	79.012	Danio_rerio
ENSCVAG00000018104	-	94	75.269	ENSELUG00000001702	-	97	76.344	Esox_lucius
ENSCVAG00000018104	-	56	78.788	ENSGMOG00000005914	-	100	78.788	Gadus_morhua
ENSCVAG00000018104	-	59	92.486	ENSGACG00000004991	-	91	94.578	Gasterosteus_aculeatus
ENSCVAG00000018104	-	100	73.986	ENSHBUG00000010040	-	100	73.649	Haplochromis_burtoni
ENSCVAG00000018104	-	100	93.878	ENSHBUG00000015412	-	100	92.517	Haplochromis_burtoni
ENSCVAG00000018104	-	100	86.689	ENSIPUG00000000507	ralyl	100	87.372	Ictalurus_punctatus
ENSCVAG00000018104	-	100	94.198	ENSKMAG00000018155	-	100	93.174	Kryptolebias_marmoratus
ENSCVAG00000018104	-	100	70.608	ENSKMAG00000022093	-	100	71.622	Kryptolebias_marmoratus
ENSCVAG00000018104	-	100	91.156	ENSLBEG00000011011	-	100	90.816	Labrus_bergylta
ENSCVAG00000018104	-	100	72.973	ENSLBEG00000012873	-	100	72.635	Labrus_bergylta
ENSCVAG00000018104	-	100	82.253	ENSLOCG00000012787	ralyl	99	82.253	Lepisosteus_oculatus
ENSCVAG00000018104	-	99	69.759	ENSMAMG00000001723	-	97	69.759	Mastacembelus_armatus
ENSCVAG00000018104	-	100	74.237	ENSMZEG00005024447	-	100	73.898	Maylandia_zebra
ENSCVAG00000018104	-	97	90.972	ENSMZEG00005018748	-	98	89.583	Maylandia_zebra
ENSCVAG00000018104	-	97	65.667	ENSMMOG00000020441	-	86	67.000	Mola_mola
ENSCVAG00000018104	-	100	73.986	ENSMALG00000019019	-	78	73.649	Monopterus_albus
ENSCVAG00000018104	-	100	93.174	ENSMALG00000012952	-	100	92.150	Monopterus_albus
ENSCVAG00000018104	-	97	67.466	ENSNBRG00000011206	-	97	67.466	Neolamprologus_brichardi
ENSCVAG00000018104	-	97	91.667	ENSNBRG00000011376	-	98	90.625	Neolamprologus_brichardi
ENSCVAG00000018104	-	100	94.539	ENSORLG00000012719	-	100	93.515	Oryzias_latipes
ENSCVAG00000018104	-	100	72.297	ENSORLG00000017934	-	100	71.284	Oryzias_latipes
ENSCVAG00000018104	-	100	70.946	ENSORLG00020000082	-	100	70.608	Oryzias_latipes_hni
ENSCVAG00000018104	-	100	94.539	ENSORLG00020004438	-	100	93.515	Oryzias_latipes_hni
ENSCVAG00000018104	-	100	72.297	ENSORLG00015004280	-	100	71.284	Oryzias_latipes_hsok
ENSCVAG00000018104	-	100	94.539	ENSORLG00015004727	-	100	93.515	Oryzias_latipes_hsok
ENSCVAG00000018104	-	100	71.959	ENSOMEG00000011821	-	100	70.946	Oryzias_melastigma
ENSCVAG00000018104	-	100	95.904	ENSOMEG00000001170	-	100	95.904	Oryzias_melastigma
ENSCVAG00000018104	-	100	78.912	ENSPKIG00000015926	-	100	78.912	Paramormyrops_kingsleyae
ENSCVAG00000018104	-	80	80.672	ENSPMGG00000014481	-	98	78.992	Periophthalmus_magnuspinnatus
ENSCVAG00000018104	-	99	67.003	ENSPMGG00000009532	-	99	67.003	Periophthalmus_magnuspinnatus
ENSCVAG00000018104	-	97	70.707	ENSPFOG00000006120	-	99	70.000	Poecilia_formosa
ENSCVAG00000018104	-	97	66.899	ENSPLAG00000009877	-	75	67.606	Poecilia_latipinna
ENSCVAG00000018104	-	97	96.516	ENSPLAG00000011323	ralyl	100	96.516	Poecilia_latipinna
ENSCVAG00000018104	-	97	66.899	ENSPMEG00000013624	-	80	66.207	Poecilia_mexicana
ENSCVAG00000018104	-	97	96.516	ENSPMEG00000023847	ralyl	100	96.516	Poecilia_mexicana
ENSCVAG00000018104	-	97	73.776	ENSPREG00000013805	-	100	68.354	Poecilia_reticulata
ENSCVAG00000018104	-	97	91.638	ENSPREG00000001956	ralyl	100	94.077	Poecilia_reticulata
ENSCVAG00000018104	-	97	90.972	ENSPNYG00000003548	-	98	89.583	Pundamilia_nyererei
ENSCVAG00000018104	-	97	67.466	ENSPNYG00000008772	-	97	67.466	Pundamilia_nyererei
ENSCVAG00000018104	-	100	88.055	ENSPNAG00000000498	-	88	87.713	Pygocentrus_nattereri
ENSCVAG00000018104	-	100	68.601	ENSPNAG00000026098	-	100	68.601	Pygocentrus_nattereri
ENSCVAG00000018104	-	100	68.259	ENSSFOG00015004575	-	96	73.852	Scleropages_formosus
ENSCVAG00000018104	-	100	88.095	ENSSFOG00015009401	-	100	88.095	Scleropages_formosus
ENSCVAG00000018104	-	100	91.837	ENSSMAG00000005608	-	100	90.476	Scophthalmus_maximus
ENSCVAG00000018104	-	97	70.280	ENSSMAG00000015907	-	93	70.280	Scophthalmus_maximus
ENSCVAG00000018104	-	100	96.928	ENSSDUG00000007587	-	100	96.928	Seriola_dumerili
ENSCVAG00000018104	-	100	73.986	ENSSDUG00000012473	-	100	73.649	Seriola_dumerili
ENSCVAG00000018104	-	100	95.563	ENSSLDG00000020603	-	100	95.563	Seriola_lalandi_dorsalis
ENSCVAG00000018104	-	100	73.649	ENSSLDG00000011534	-	100	73.311	Seriola_lalandi_dorsalis
ENSCVAG00000018104	-	97	64.437	ENSSPAG00000013858	-	96	62.457	Stegastes_partitus
ENSCVAG00000018104	-	82	75.417	ENSTRUG00000003829	-	95	71.025	Takifugu_rubripes
ENSCVAG00000018104	-	97	67.347	ENSTNIG00000005594	-	99	67.119	Tetraodon_nigroviridis
ENSCVAG00000018104	-	100	68.814	ENSXETG00000017729	ralyl	99	70.169	Xenopus_tropicalis
ENSCVAG00000018104	-	97	93.878	ENSXCOG00000015156	-	93	93.559	Xiphophorus_couchianus
ENSCVAG00000018104	-	100	74.324	ENSXMAG00000007614	-	100	73.986	Xiphophorus_maculatus
ENSCVAG00000018104	-	100	97.611	ENSXMAG00000008396	-	100	97.611	Xiphophorus_maculatus