EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018114 (Gene tree)
Gene ID: 107090814
Gene Symbol: ythdf3
Alias: wu:fi35c09|zgc:55441
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 10477 bases
Position: chrKL652811.1:195744-206220
Accession: 107090814
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000029926	YTH	PF04146.15	6.7e-40	1	1
ENSCVAP00000015321	YTH	PF04146.15	7.8e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023386	-	3330	XM_015384401	ENSCVAP00000015321	599 (aa)	XP_015239887	UPI0007427C16
ENSCVAT00000023381	-	1641	XM_015384400	ENSCVAP00000029926	546 (aa)	XP_015239886	-

Gene Model

Click here to download ENSCVAG00000018114's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018114's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018114	ythdf3	98	64.440	ENSCVAG00000015233	ythdf2	98	65.461
ENSCVAG00000018114	ythdf3	96	59.818	ENSCVAG00000017940	ythdf1	97	60.000
ENSCVAG00000018114	ythdf3	97	59.900	ENSCVAG00000014378	YTHDF1	99	62.811

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018114	ythdf3	100	91.708	ENSAPOG00000024006	ythdf3	100	92.206	Acanthochromis_polyacanthus
ENSCVAG00000018114	ythdf3	100	88.889	ENSACIG00000022287	ythdf3	99	90.143	Amphilophus_citrinellus
ENSCVAG00000018114	ythdf3	96	96.875	ENSAOCG00000000723	ythdf3	100	92.206	Amphiprion_ocellaris
ENSCVAG00000018114	ythdf3	96	96.429	ENSAPEG00000020352	ythdf3	100	91.708	Amphiprion_percula
ENSCVAG00000018114	ythdf3	95	96.774	ENSATEG00000011478	ythdf3	98	96.410	Anabas_testudineus
ENSCVAG00000018114	ythdf3	55	93.355	ENSACLG00000026145	ythdf3	99	91.419	Astatotilapia_calliptera
ENSCVAG00000018114	ythdf3	98	80.496	ENSAMXG00000030366	ythdf3	100	79.388	Astyanax_mexicanus
ENSCVAG00000018114	ythdf3	99	75.622	ENSCGRG00000005613	-	100	75.788	Cricetulus_griseus_crigri
ENSCVAG00000018114	ythdf3	65	56.183	ENSCGRG00000008289	-	100	55.914	Cricetulus_griseus_crigri
ENSCVAG00000018114	ythdf3	100	89.744	ENSCSEG00000014861	ythdf3	99	89.901	Cynoglossus_semilaevis
ENSCVAG00000018114	ythdf3	100	79.051	ENSDARG00000057939	ythdf3	100	79.902	Danio_rerio
ENSCVAG00000018114	ythdf3	97	67.953	ENSETEG00000007144	YTHDF3	100	75.916	Echinops_telfairi
ENSCVAG00000018114	ythdf3	100	79.677	ENSELUG00000014824	ythdf3	100	79.612	Esox_lucius
ENSCVAG00000018114	ythdf3	99	77.320	ENSFCAG00000025314	YTHDF3	99	76.289	Felis_catus
ENSCVAG00000018114	ythdf3	100	94.859	ENSFHEG00000016395	ythdf3	100	94.859	Fundulus_heteroclitus
ENSCVAG00000018114	ythdf3	100	79.194	ENSGMOG00000014950	ythdf3	100	81.592	Gadus_morhua
ENSCVAG00000018114	ythdf3	99	77.931	ENSGALG00000039774	YTHDF3	99	77.153	Gallus_gallus
ENSCVAG00000018114	ythdf3	100	94.693	ENSGAFG00000006529	ythdf3	100	94.693	Gambusia_affinis
ENSCVAG00000018114	ythdf3	99	89.667	ENSGACG00000002998	ythdf3	99	89.667	Gasterosteus_aculeatus
ENSCVAG00000018114	ythdf3	99	87.544	ENSHBUG00000018631	ythdf3	99	91.118	Haplochromis_burtoni
ENSCVAG00000018114	ythdf3	99	82.462	ENSHCOG00000015277	ythdf3	99	81.833	Hippocampus_comes
ENSCVAG00000018114	ythdf3	100	78.396	ENSIPUG00000014157	YTHDF1	100	79.608	Ictalurus_punctatus
ENSCVAG00000018114	ythdf3	96	97.321	ENSKMAG00000008447	ythdf3	100	91.254	Kryptolebias_marmoratus
ENSCVAG00000018114	ythdf3	99	89.744	ENSLBEG00000017003	ythdf3	99	90.110	Labrus_bergylta
ENSCVAG00000018114	ythdf3	99	75.885	ENSLAFG00000016052	YTHDF3	99	74.874	Loxodonta_africana
ENSCVAG00000018114	ythdf3	96	86.851	ENSMAMG00000000414	ythdf3	100	85.517	Mastacembelus_armatus
ENSCVAG00000018114	ythdf3	99	87.544	ENSMZEG00005021836	ythdf3	99	92.027	Maylandia_zebra
ENSCVAG00000018114	ythdf3	99	77.931	ENSMGAG00000011168	YTHDF3	100	76.661	Meleagris_gallopavo
ENSCVAG00000018114	ythdf3	64	72.966	ENSMAUG00000012560	Ythdf3	99	72.178	Mesocricetus_auratus
ENSCVAG00000018114	ythdf3	65	56.234	ENSMICG00000009379	-	100	55.867	Microcebus_murinus
ENSCVAG00000018114	ythdf3	96	83.238	ENSMMOG00000003402	ythdf3	98	82.857	Mola_mola
ENSCVAG00000018114	ythdf3	96	95.536	ENSMALG00000000147	ythdf3	100	90.713	Monopterus_albus
ENSCVAG00000018114	ythdf3	99	75.809	MGP_SPRETEiJ_G0025794	Ythdf3	99	76.289	Mus_spretus
ENSCVAG00000018114	ythdf3	98	83.333	ENSNBRG00000023433	ythdf3	99	91.252	Neolamprologus_brichardi
ENSCVAG00000018114	ythdf3	54	80.405	ENSNLEG00000003872	YTHDF3	99	76.117	Nomascus_leucogenys
ENSCVAG00000018114	ythdf3	55	93.688	ENSONIG00000014175	ythdf3	99	91.391	Oreochromis_niloticus
ENSCVAG00000018114	ythdf3	99	75.897	ENSOANG00000005053	YTHDF3	100	75.897	Ornithorhynchus_anatinus
ENSCVAG00000018114	ythdf3	100	89.369	ENSORLG00000008640	ythdf3	100	89.369	Oryzias_latipes
ENSCVAG00000018114	ythdf3	100	89.369	ENSORLG00020014684	ythdf3	100	89.369	Oryzias_latipes_hni
ENSCVAG00000018114	ythdf3	100	89.203	ENSORLG00015014880	ythdf3	100	89.203	Oryzias_latipes_hsok
ENSCVAG00000018114	ythdf3	100	89.867	ENSOMEG00000008212	ythdf3	100	89.867	Oryzias_melastigma
ENSCVAG00000018114	ythdf3	99	77.320	ENSPPRG00000004665	YTHDF3	99	76.289	Panthera_pardus
ENSCVAG00000018114	ythdf3	99	75.552	ENSPTIG00000021537	YTHDF3	100	75.651	Panthera_tigris_altaica
ENSCVAG00000018114	ythdf3	97	80.431	ENSPKIG00000008298	ythdf3	99	81.802	Paramormyrops_kingsleyae
ENSCVAG00000018114	ythdf3	97	90.000	ENSPMGG00000023791	ythdf3	98	89.434	Periophthalmus_magnuspinnatus
ENSCVAG00000018114	ythdf3	100	94.859	ENSPFOG00000006082	ythdf3	100	94.859	Poecilia_formosa
ENSCVAG00000018114	ythdf3	100	95.025	ENSPLAG00000006902	ythdf3	100	95.025	Poecilia_latipinna
ENSCVAG00000018114	ythdf3	100	94.527	ENSPMEG00000012922	ythdf3	100	94.527	Poecilia_mexicana
ENSCVAG00000018114	ythdf3	100	92.715	ENSPREG00000019781	ythdf3	100	95.033	Poecilia_reticulata
ENSCVAG00000018114	ythdf3	89	90.805	ENSPPYG00000018626	YTHDF3	100	90.426	Pongo_abelii
ENSCVAG00000018114	ythdf3	88	92.553	ENSPVAG00000002740	YTHDF3	86	92.553	Pteropus_vampyrus
ENSCVAG00000018114	ythdf3	99	82.440	ENSPNYG00000002949	ythdf3	98	95.434	Pundamilia_nyererei
ENSCVAG00000018114	ythdf3	100	68.954	ENSSHAG00000009482	YTHDF3	100	75.614	Sarcophilus_harrisii
ENSCVAG00000018114	ythdf3	96	78.967	ENSSFOG00015015445	ythdf3	97	78.203	Scleropages_formosus
ENSCVAG00000018114	ythdf3	99	87.979	ENSSMAG00000014999	ythdf3	100	90.169	Scophthalmus_maximus
ENSCVAG00000018114	ythdf3	96	96.429	ENSSDUG00000014403	ythdf3	100	92.040	Seriola_dumerili
ENSCVAG00000018114	ythdf3	96	96.429	ENSSLDG00000005029	ythdf3	100	92.040	Seriola_lalandi_dorsalis
ENSCVAG00000018114	ythdf3	99	87.963	ENSSPAG00000001269	ythdf3	99	90.744	Stegastes_partitus
ENSCVAG00000018114	ythdf3	100	88.099	ENSTRUG00000007870	ythdf3	100	88.430	Takifugu_rubripes
ENSCVAG00000018114	ythdf3	100	85.904	ENSTNIG00000012698	ythdf3	100	85.738	Tetraodon_nigroviridis
ENSCVAG00000018114	ythdf3	98	72.822	ENSTTRG00000014564	YTHDF3	99	73.868	Tursiops_truncatus
ENSCVAG00000018114	ythdf3	87	86.842	ENSVPAG00000008104	YTHDF3	90	83.085	Vicugna_pacos
ENSCVAG00000018114	ythdf3	99	77.058	ENSXETG00000021659	ythdf3	99	76.708	Xenopus_tropicalis
ENSCVAG00000018114	ythdf3	99	91.246	ENSXCOG00000009687	ythdf3	100	89.850	Xiphophorus_couchianus
ENSCVAG00000018114	ythdf3	100	94.527	ENSXMAG00000009698	ythdf3	100	94.527	Xiphophorus_maculatus