EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018200 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 468 bases
Position: chrKL652937.1:470043-470510
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015423	RVT_1	PF00078.27	4.4e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023506	-	468	-	ENSCVAP00000015423	155 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000018200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018200	-	80	47.328	ENSCVAG00000019758	-	90	47.328

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018200	-	86	45.113	ENSAPOG00000023528	-	58	46.259	Acanthochromis_polyacanthus
ENSCVAG00000018200	-	85	51.145	ENSACIG00000019567	-	55	51.145	Amphilophus_citrinellus
ENSCVAG00000018200	-	83	50.000	ENSACIG00000011711	-	58	50.000	Amphilophus_citrinellus
ENSCVAG00000018200	-	77	36.975	ENSAOCG00000022972	-	57	36.975	Amphiprion_ocellaris
ENSCVAG00000018200	-	94	43.836	ENSAPEG00000007794	-	70	43.836	Amphiprion_percula
ENSCVAG00000018200	-	83	38.281	ENSACLG00000011781	-	71	38.281	Astatotilapia_calliptera
ENSCVAG00000018200	-	95	43.333	ENSACLG00000015452	-	78	43.333	Astatotilapia_calliptera
ENSCVAG00000018200	-	93	40.000	ENSELUG00000008528	-	51	40.000	Esox_lucius
ENSCVAG00000018200	-	97	51.333	ENSHBUG00000023310	-	69	51.333	Haplochromis_burtoni
ENSCVAG00000018200	-	90	39.568	ENSHBUG00000020518	-	61	39.568	Haplochromis_burtoni
ENSCVAG00000018200	-	92	39.437	ENSIPUG00000017061	-	63	39.437	Ictalurus_punctatus
ENSCVAG00000018200	-	97	44.667	ENSKMAG00000013085	-	56	44.667	Kryptolebias_marmoratus
ENSCVAG00000018200	-	93	43.750	ENSMAMG00000019150	-	67	43.750	Mastacembelus_armatus
ENSCVAG00000018200	-	96	33.557	ENSMAMG00000017010	-	73	32.000	Mastacembelus_armatus
ENSCVAG00000018200	-	66	41.176	ENSMZEG00005007816	-	51	41.176	Maylandia_zebra
ENSCVAG00000018200	-	92	46.479	ENSMZEG00005010549	-	55	46.479	Maylandia_zebra
ENSCVAG00000018200	-	98	61.842	ENSMZEG00005015165	-	85	61.842	Maylandia_zebra
ENSCVAG00000018200	-	72	45.946	ENSMMOG00000020155	-	84	40.523	Mola_mola
ENSCVAG00000018200	-	97	42.667	ENSMALG00000016641	-	68	42.667	Monopterus_albus
ENSCVAG00000018200	-	97	43.333	ENSMALG00000015013	-	65	43.333	Monopterus_albus
ENSCVAG00000018200	-	95	44.218	ENSMALG00000000917	-	70	44.218	Monopterus_albus
ENSCVAG00000018200	-	90	41.007	ENSMALG00000016223	-	56	41.007	Monopterus_albus
ENSCVAG00000018200	-	97	43.709	ENSMALG00000001931	-	50	43.709	Monopterus_albus
ENSCVAG00000018200	-	97	44.667	ENSMALG00000018544	-	50	44.667	Monopterus_albus
ENSCVAG00000018200	-	97	46.000	ENSMALG00000011352	-	59	46.000	Monopterus_albus
ENSCVAG00000018200	-	97	49.333	ENSMALG00000006417	-	87	49.333	Monopterus_albus
ENSCVAG00000018200	-	86	46.715	ENSNBRG00000001191	-	72	46.715	Neolamprologus_brichardi
ENSCVAG00000018200	-	97	53.333	ENSNBRG00000024357	-	84	53.333	Neolamprologus_brichardi
ENSCVAG00000018200	-	90	46.043	ENSNBRG00000021767	-	58	46.043	Neolamprologus_brichardi
ENSCVAG00000018200	-	88	46.715	ENSNBRG00000012007	-	86	46.715	Neolamprologus_brichardi
ENSCVAG00000018200	-	95	35.135	ENSORLG00000024000	-	52	32.432	Oryzias_latipes
ENSCVAG00000018200	-	97	47.333	ENSORLG00000022855	-	73	47.333	Oryzias_latipes
ENSCVAG00000018200	-	95	34.459	ENSORLG00000027612	-	69	31.757	Oryzias_latipes
ENSCVAG00000018200	-	90	60.432	ENSORLG00000022033	-	64	58.273	Oryzias_latipes
ENSCVAG00000018200	-	97	46.000	ENSORLG00020001640	-	70	46.667	Oryzias_latipes_hni
ENSCVAG00000018200	-	96	46.980	ENSORLG00020005670	-	57	46.980	Oryzias_latipes_hni
ENSCVAG00000018200	-	97	48.000	ENSORLG00020018147	-	65	48.000	Oryzias_latipes_hni
ENSCVAG00000018200	-	97	52.000	ENSORLG00020012794	-	62	52.000	Oryzias_latipes_hni
ENSCVAG00000018200	-	97	49.333	ENSORLG00015002932	-	53	49.333	Oryzias_latipes_hsok
ENSCVAG00000018200	-	96	48.993	ENSORLG00015017469	-	58	49.324	Oryzias_latipes_hsok
ENSCVAG00000018200	-	97	58.000	ENSORLG00015014280	-	53	58.000	Oryzias_latipes_hsok
ENSCVAG00000018200	-	95	37.162	ENSORLG00015010852	-	51	37.162	Oryzias_latipes_hsok
ENSCVAG00000018200	-	97	54.667	ENSPKIG00000025564	-	57	54.667	Paramormyrops_kingsleyae
ENSCVAG00000018200	-	95	37.162	ENSPMGG00000001725	-	73	37.162	Periophthalmus_magnuspinnatus
ENSCVAG00000018200	-	97	49.333	ENSPFOG00000024796	-	51	49.333	Poecilia_formosa
ENSCVAG00000018200	-	86	38.519	ENSPNYG00000018410	-	73	41.135	Pundamilia_nyererei
ENSCVAG00000018200	-	83	48.837	ENSPNYG00000022945	-	69	48.837	Pundamilia_nyererei
ENSCVAG00000018200	-	83	45.312	ENSPNYG00000006290	-	60	45.312	Pundamilia_nyererei
ENSCVAG00000018200	-	85	47.328	ENSPNAG00000013203	-	51	50.000	Pygocentrus_nattereri
ENSCVAG00000018200	-	97	52.667	ENSPNAG00000024994	-	93	52.667	Pygocentrus_nattereri
ENSCVAG00000018200	-	95	44.218	ENSSMAG00000015804	-	61	44.218	Scophthalmus_maximus
ENSCVAG00000018200	-	90	45.390	ENSSDUG00000006485	-	68	45.390	Seriola_dumerili
ENSCVAG00000018200	-	70	46.364	ENSXETG00000031733	-	66	46.364	Xenopus_tropicalis
ENSCVAG00000018200	-	82	36.364	ENSXCOG00000003154	-	89	33.566	Xiphophorus_couchianus