EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000018229 (Gene tree)
Gene ID: 107089648
Gene Symbol: mrpl40
Alias: fj54c06|wu:fj54c06|zgc:103495
Full Name: mitochondrial ribosomal protein L40
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4116 bases
Position: chrKL652760.1:775272-779387
Accession: 107089648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015438	MRP-L28	PF09812.9	2.2e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031512	-	2080	XM_015382553	ENSCVAP00000015438	203 (aa)	XP_015238039	UPI0007425A69

Gene Model

Click here to download ENSCVAG00000018229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018229's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018229	mrpl40	97	53.030	ENSG00000185608	MRPL40	91	53.030	Homo_sapiens
ENSCVAG00000018229	mrpl40	100	78.325	ENSAPOG00000021291	mrpl40	100	78.325	Acanthochromis_polyacanthus
ENSCVAG00000018229	mrpl40	77	57.595	ENSAMEG00000011421	MRPL40	77	57.595	Ailuropoda_melanoleuca
ENSCVAG00000018229	mrpl40	100	65.366	ENSACIG00000006717	MRPL40	96	65.366	Amphilophus_citrinellus
ENSCVAG00000018229	mrpl40	100	78.325	ENSACIG00000006672	mrpl40	100	78.325	Amphilophus_citrinellus
ENSCVAG00000018229	mrpl40	100	81.773	ENSAOCG00000003216	mrpl40	100	81.773	Amphiprion_ocellaris
ENSCVAG00000018229	mrpl40	100	81.281	ENSAPEG00000017401	mrpl40	100	81.281	Amphiprion_percula
ENSCVAG00000018229	mrpl40	76	85.714	ENSATEG00000020753	mrpl40	91	85.714	Anabas_testudineus
ENSCVAG00000018229	mrpl40	84	58.721	ENSAPLG00000004002	MRPL40	86	58.721	Anas_platyrhynchos
ENSCVAG00000018229	mrpl40	83	59.763	ENSACAG00000001053	MRPL40	85	59.763	Anolis_carolinensis
ENSCVAG00000018229	mrpl40	97	51.515	ENSANAG00000026579	MRPL40	91	51.515	Aotus_nancymaae
ENSCVAG00000018229	mrpl40	100	81.773	ENSACLG00000011106	mrpl40	100	81.773	Astatotilapia_calliptera
ENSCVAG00000018229	mrpl40	84	70.760	ENSAMXG00000029691	mrpl40	84	70.760	Astyanax_mexicanus
ENSCVAG00000018229	mrpl40	97	52.284	ENSBTAG00000019891	MRPL40	89	52.284	Bos_taurus
ENSCVAG00000018229	mrpl40	73	36.129	WBGene00018793	mrpl-40	62	38.136	Caenorhabditis_elegans
ENSCVAG00000018229	mrpl40	100	51.961	ENSCJAG00000001584	MRPL40	94	51.961	Callithrix_jacchus
ENSCVAG00000018229	mrpl40	97	54.271	ENSCAFG00020007995	MRPL40	91	54.271	Canis_lupus_dingo
ENSCVAG00000018229	mrpl40	82	46.707	ENSCHIG00000026872	-	92	46.707	Capra_hircus
ENSCVAG00000018229	mrpl40	97	53.299	ENSCHIG00000000131	-	89	53.299	Capra_hircus
ENSCVAG00000018229	mrpl40	77	62.025	ENSTSYG00000014747	MRPL40	78	62.025	Carlito_syrichta
ENSCVAG00000018229	mrpl40	68	63.043	ENSCAPG00000012876	MRPL40	85	65.289	Cavia_aperea
ENSCVAG00000018229	mrpl40	96	50.725	ENSCPOG00000026802	MRPL40	97	52.174	Cavia_porcellus
ENSCVAG00000018229	mrpl40	97	51.269	ENSCCAG00000037694	MRPL40	94	51.269	Cebus_capucinus
ENSCVAG00000018229	mrpl40	99	51.741	ENSCATG00000043592	-	94	51.741	Cercocebus_atys
ENSCVAG00000018229	mrpl40	100	51.471	ENSCATG00000031418	-	93	51.471	Cercocebus_atys
ENSCVAG00000018229	mrpl40	77	60.759	ENSCLAG00000016629	MRPL40	98	50.980	Chinchilla_lanigera
ENSCVAG00000018229	mrpl40	77	62.025	ENSCSAG00000011593	MRPL40	77	62.025	Chlorocebus_sabaeus
ENSCVAG00000018229	mrpl40	69	56.738	ENSCHOG00000008751	MRPL40	93	55.152	Choloepus_hoffmanni
ENSCVAG00000018229	mrpl40	97	52.551	ENSCPBG00000010618	MRPL40	99	52.551	Chrysemys_picta_bellii
ENSCVAG00000018229	mrpl40	63	40.945	ENSCSAVG00000001505	-	54	40.909	Ciona_savignyi
ENSCVAG00000018229	mrpl40	92	54.255	ENSCANG00000038600	MRPL40	96	54.255	Colobus_angolensis_palliatus
ENSCVAG00000018229	mrpl40	96	53.571	ENSCGRG00001019957	Mrpl40	87	53.571	Cricetulus_griseus_chok1gshd
ENSCVAG00000018229	mrpl40	96	53.571	ENSCGRG00000001245	Mrpl40	87	53.571	Cricetulus_griseus_crigri
ENSCVAG00000018229	mrpl40	100	71.078	ENSCSEG00000019750	mrpl40	100	71.078	Cynoglossus_semilaevis
ENSCVAG00000018229	mrpl40	79	49.693	ENSCSEG00000012296	-	90	49.693	Cynoglossus_semilaevis
ENSCVAG00000018229	mrpl40	84	65.698	ENSDARG00000043554	mrpl40	98	59.184	Danio_rerio
ENSCVAG00000018229	mrpl40	69	55.714	ENSDNOG00000038360	-	75	53.205	Dasypus_novemcinctus
ENSCVAG00000018229	mrpl40	77	62.658	ENSDORG00000002949	Mrpl40	77	62.658	Dipodomys_ordii
ENSCVAG00000018229	mrpl40	82	40.462	FBgn0037892	mRpL40	87	41.040	Drosophila_melanogaster
ENSCVAG00000018229	mrpl40	50	57.426	ENSETEG00000006816	-	54	57.426	Echinops_telfairi
ENSCVAG00000018229	mrpl40	92	51.596	ENSEASG00005010493	MRPL40	88	51.596	Equus_asinus_asinus
ENSCVAG00000018229	mrpl40	78	57.500	ENSECAG00000009876	MRPL40	96	57.500	Equus_caballus
ENSCVAG00000018229	mrpl40	93	53.439	ENSEEUG00000009268	MRPL40	87	53.439	Erinaceus_europaeus
ENSCVAG00000018229	mrpl40	100	73.892	ENSELUG00000009281	mrpl40	100	73.892	Esox_lucius
ENSCVAG00000018229	mrpl40	77	58.228	ENSFCAG00000002752	MRPL40	77	58.228	Felis_catus
ENSCVAG00000018229	mrpl40	83	59.763	ENSFALG00000007981	MRPL40	97	55.729	Ficedula_albicollis
ENSCVAG00000018229	mrpl40	77	57.962	ENSFDAG00000020940	MRPL40	97	57.962	Fukomys_damarensis
ENSCVAG00000018229	mrpl40	95	56.716	ENSGALG00000053063	MRPL40	67	56.716	Gallus_gallus
ENSCVAG00000018229	mrpl40	100	84.729	ENSGAFG00000000522	mrpl40	100	84.729	Gambusia_affinis
ENSCVAG00000018229	mrpl40	83	59.763	ENSGAGG00000020728	MRPL40	82	59.763	Gopherus_agassizii
ENSCVAG00000018229	mrpl40	97	53.030	ENSGGOG00000012336	MRPL40	91	53.030	Gorilla_gorilla
ENSCVAG00000018229	mrpl40	100	81.951	ENSHBUG00000000404	mrpl40	100	81.951	Haplochromis_burtoni
ENSCVAG00000018229	mrpl40	77	62.420	ENSHGLG00000018525	MRPL40	97	62.420	Heterocephalus_glaber_female
ENSCVAG00000018229	mrpl40	78	62.264	ENSHGLG00100009563	MRPL40	77	62.264	Heterocephalus_glaber_male
ENSCVAG00000018229	mrpl40	100	71.707	ENSHCOG00000005731	mrpl40	100	71.707	Hippocampus_comes
ENSCVAG00000018229	mrpl40	100	64.878	ENSIPUG00000020288	Mrpl40	97	64.878	Ictalurus_punctatus
ENSCVAG00000018229	mrpl40	96	51.244	ENSSTOG00000002887	MRPL40	95	51.244	Ictidomys_tridecemlineatus
ENSCVAG00000018229	mrpl40	99	51.442	ENSJJAG00000017905	Mrpl40	95	51.923	Jaculus_jaculus
ENSCVAG00000018229	mrpl40	100	76.847	ENSKMAG00000003717	mrpl40	100	76.847	Kryptolebias_marmoratus
ENSCVAG00000018229	mrpl40	100	67.980	ENSLBEG00000025203	mrpl40	100	67.980	Labrus_bergylta
ENSCVAG00000018229	mrpl40	84	64.740	ENSLACG00000015070	MRPL40	85	64.740	Latimeria_chalumnae
ENSCVAG00000018229	mrpl40	98	66.332	ENSLOCG00000001879	mrpl40	93	66.332	Lepisosteus_oculatus
ENSCVAG00000018229	mrpl40	77	58.861	ENSLAFG00000011061	MRPL40	77	58.861	Loxodonta_africana
ENSCVAG00000018229	mrpl40	100	51.471	ENSMFAG00000032018	-	93	51.471	Macaca_fascicularis
ENSCVAG00000018229	mrpl40	99	50.249	ENSMFAG00000001495	-	94	50.249	Macaca_fascicularis
ENSCVAG00000018229	mrpl40	77	59.494	ENSMFAG00000039890	-	84	59.494	Macaca_fascicularis
ENSCVAG00000018229	mrpl40	77	58.228	ENSMMUG00000006218	-	88	58.228	Macaca_mulatta
ENSCVAG00000018229	mrpl40	99	49.751	ENSMMUG00000030886	-	93	49.751	Macaca_mulatta
ENSCVAG00000018229	mrpl40	100	50.490	ENSMNEG00000034050	-	93	50.490	Macaca_nemestrina
ENSCVAG00000018229	mrpl40	99	51.244	ENSMNEG00000041171	-	97	50.739	Macaca_nemestrina
ENSCVAG00000018229	mrpl40	71	60.417	ENSMNEG00000040492	-	66	64.463	Macaca_nemestrina
ENSCVAG00000018229	mrpl40	99	51.741	ENSMLEG00000032552	-	94	51.741	Mandrillus_leucophaeus
ENSCVAG00000018229	mrpl40	77	58.861	ENSMLEG00000009022	-	84	58.861	Mandrillus_leucophaeus
ENSCVAG00000018229	mrpl40	96	52.041	ENSMLEG00000030926	-	97	52.551	Mandrillus_leucophaeus
ENSCVAG00000018229	mrpl40	100	79.310	ENSMAMG00000014249	mrpl40	100	79.310	Mastacembelus_armatus
ENSCVAG00000018229	mrpl40	100	81.773	ENSMZEG00005009853	mrpl40	100	81.773	Maylandia_zebra
ENSCVAG00000018229	mrpl40	76	63.226	ENSMGAG00000001177	MRPL40	100	63.226	Meleagris_gallopavo
ENSCVAG00000018229	mrpl40	96	53.571	ENSMAUG00000015350	Mrpl40	87	53.571	Mesocricetus_auratus
ENSCVAG00000018229	mrpl40	97	52.525	ENSMICG00000046066	MRPL40	91	52.525	Microcebus_murinus
ENSCVAG00000018229	mrpl40	96	52.551	ENSMOCG00000016970	Mrpl40	87	52.551	Microtus_ochrogaster
ENSCVAG00000018229	mrpl40	88	76.374	ENSMMOG00000012861	mrpl40	99	76.374	Mola_mola
ENSCVAG00000018229	mrpl40	83	57.647	ENSMODG00000010070	MRPL40	93	57.647	Monodelphis_domestica
ENSCVAG00000018229	mrpl40	100	77.833	ENSMALG00000020778	mrpl40	100	77.833	Monopterus_albus
ENSCVAG00000018229	mrpl40	77	62.025	MGP_CAROLIEiJ_G0020557	Mrpl40	97	61.783	Mus_caroli
ENSCVAG00000018229	mrpl40	77	62.025	ENSMUSG00000022706	Mrpl40	97	61.783	Mus_musculus
ENSCVAG00000018229	mrpl40	77	62.658	MGP_PahariEiJ_G0016262	Mrpl40	97	62.420	Mus_pahari
ENSCVAG00000018229	mrpl40	77	62.025	MGP_SPRETEiJ_G0021452	Mrpl40	97	61.783	Mus_spretus
ENSCVAG00000018229	mrpl40	77	57.595	ENSMPUG00000003865	MRPL40	77	57.595	Mustela_putorius_furo
ENSCVAG00000018229	mrpl40	77	60.127	ENSMLUG00000002456	-	77	60.127	Myotis_lucifugus
ENSCVAG00000018229	mrpl40	77	60.127	ENSMLUG00000024620	-	77	60.127	Myotis_lucifugus
ENSCVAG00000018229	mrpl40	94	54.974	ENSNGAG00000000304	Mrpl40	89	54.974	Nannospalax_galili
ENSCVAG00000018229	mrpl40	69	61.429	ENSNLEG00000005372	MRPL40	98	50.718	Nomascus_leucogenys
ENSCVAG00000018229	mrpl40	50	55.882	ENSMEUG00000003868	-	69	55.882	Notamacropus_eugenii
ENSCVAG00000018229	mrpl40	77	60.759	ENSODEG00000017051	MRPL40	77	60.759	Octodon_degus
ENSCVAG00000018229	mrpl40	100	80.788	ENSONIG00000014393	mrpl40	100	80.788	Oreochromis_niloticus
ENSCVAG00000018229	mrpl40	77	62.025	ENSOCUG00000009859	MRPL40	57	62.025	Oryctolagus_cuniculus
ENSCVAG00000018229	mrpl40	100	78.818	ENSORLG00000002574	mrpl40	100	78.818	Oryzias_latipes
ENSCVAG00000018229	mrpl40	100	79.803	ENSORLG00020005727	mrpl40	100	79.803	Oryzias_latipes_hni
ENSCVAG00000018229	mrpl40	100	78.325	ENSORLG00015015422	mrpl40	100	78.325	Oryzias_latipes_hsok
ENSCVAG00000018229	mrpl40	100	80.788	ENSOMEG00000017632	mrpl40	100	80.788	Oryzias_melastigma
ENSCVAG00000018229	mrpl40	77	63.291	ENSOGAG00000030071	MRPL40	84	63.291	Otolemur_garnettii
ENSCVAG00000018229	mrpl40	98	52.000	ENSOARG00000017561	MRPL40	90	52.000	Ovis_aries
ENSCVAG00000018229	mrpl40	97	53.535	ENSPPAG00000030349	MRPL40	91	53.535	Pan_paniscus
ENSCVAG00000018229	mrpl40	77	58.228	ENSPPRG00000004672	MRPL40	77	58.228	Panthera_pardus
ENSCVAG00000018229	mrpl40	77	58.228	ENSPTIG00000003393	MRPL40	77	58.228	Panthera_tigris_altaica
ENSCVAG00000018229	mrpl40	97	53.535	ENSPTRG00000014061	MRPL40	91	53.535	Pan_troglodytes
ENSCVAG00000018229	mrpl40	100	50.980	ENSPANG00000007370	-	93	50.980	Papio_anubis
ENSCVAG00000018229	mrpl40	99	52.239	ENSPANG00000000595	-	94	52.239	Papio_anubis
ENSCVAG00000018229	mrpl40	100	58.824	ENSPKIG00000024494	mrpl40	100	58.824	Paramormyrops_kingsleyae
ENSCVAG00000018229	mrpl40	81	60.366	ENSPSIG00000003055	MRPL40	99	60.366	Pelodiscus_sinensis
ENSCVAG00000018229	mrpl40	100	67.980	ENSPMGG00000018388	mrpl40	100	67.980	Periophthalmus_magnuspinnatus
ENSCVAG00000018229	mrpl40	96	53.061	ENSPEMG00000017933	Mrpl40	87	53.061	Peromyscus_maniculatus_bairdii
ENSCVAG00000018229	mrpl40	77	56.329	ENSPCIG00000025479	MRPL40	77	56.329	Phascolarctos_cinereus
ENSCVAG00000018229	mrpl40	100	85.437	ENSPFOG00000012506	mrpl40	97	85.437	Poecilia_formosa
ENSCVAG00000018229	mrpl40	100	85.714	ENSPLAG00000017335	mrpl40	100	85.714	Poecilia_latipinna
ENSCVAG00000018229	mrpl40	100	87.192	ENSPMEG00000003881	mrpl40	100	87.192	Poecilia_mexicana
ENSCVAG00000018229	mrpl40	100	85.222	ENSPREG00000011448	mrpl40	100	85.222	Poecilia_reticulata
ENSCVAG00000018229	mrpl40	92	54.255	ENSPPYG00000011578	MRPL40	96	54.255	Pongo_abelii
ENSCVAG00000018229	mrpl40	64	56.923	ENSPCAG00000007834	MRPL40	59	59.504	Procavia_capensis
ENSCVAG00000018229	mrpl40	97	52.020	ENSPCOG00000014413	MRPL40	91	52.020	Propithecus_coquereli
ENSCVAG00000018229	mrpl40	100	81.773	ENSPNYG00000008216	mrpl40	100	81.773	Pundamilia_nyererei
ENSCVAG00000018229	mrpl40	100	66.010	ENSPNAG00000000310	mrpl40	99	75.974	Pygocentrus_nattereri
ENSCVAG00000018229	mrpl40	77	62.658	ENSRNOG00000049686	Mrpl40	77	62.658	Rattus_norvegicus
ENSCVAG00000018229	mrpl40	97	53.030	ENSRBIG00000023060	MRPL40	91	53.030	Rhinopithecus_bieti
ENSCVAG00000018229	mrpl40	97	52.020	ENSRROG00000043837	MRPL40	91	52.020	Rhinopithecus_roxellana
ENSCVAG00000018229	mrpl40	97	51.515	ENSSBOG00000031050	MRPL40	91	51.515	Saimiri_boliviensis_boliviensis
ENSCVAG00000018229	mrpl40	77	59.494	ENSSHAG00000010239	MRPL40	98	59.494	Sarcophilus_harrisii
ENSCVAG00000018229	mrpl40	84	65.698	ENSSFOG00015014220	mrpl40	88	65.698	Scleropages_formosus
ENSCVAG00000018229	mrpl40	100	75.490	ENSSMAG00000006340	mrpl40	100	75.490	Scophthalmus_maximus
ENSCVAG00000018229	mrpl40	100	73.529	ENSSDUG00000022994	mrpl40	100	73.529	Seriola_dumerili
ENSCVAG00000018229	mrpl40	100	73.039	ENSSLDG00000009671	mrpl40	100	73.039	Seriola_lalandi_dorsalis
ENSCVAG00000018229	mrpl40	95	52.332	ENSSARG00000003051	MRPL40	77	59.494	Sorex_araneus
ENSCVAG00000018229	mrpl40	83	57.647	ENSSPUG00000015559	MRPL40	85	59.412	Sphenodon_punctatus
ENSCVAG00000018229	mrpl40	100	77.833	ENSSPAG00000015481	mrpl40	100	77.833	Stegastes_partitus
ENSCVAG00000018229	mrpl40	87	54.802	ENSSSCG00000034014	MRPL40	82	54.802	Sus_scrofa
ENSCVAG00000018229	mrpl40	60	62.295	ENSTGUG00000008534	MRPL40	100	62.338	Taeniopygia_guttata
ENSCVAG00000018229	mrpl40	99	73.632	ENSTRUG00000025904	mrpl40	100	73.632	Takifugu_rubripes
ENSCVAG00000018229	mrpl40	77	59.494	ENSTTRG00000014932	MRPL40	78	59.494	Tursiops_truncatus
ENSCVAG00000018229	mrpl40	77	58.228	ENSUAMG00000007667	MRPL40	77	58.228	Ursus_americanus
ENSCVAG00000018229	mrpl40	71	56.164	ENSUMAG00000006804	MRPL40	77	56.164	Ursus_maritimus
ENSCVAG00000018229	mrpl40	97	42.929	ENSVVUG00000020719	-	90	42.929	Vulpes_vulpes
ENSCVAG00000018229	mrpl40	96	50.980	ENSVVUG00000025360	-	97	50.980	Vulpes_vulpes
ENSCVAG00000018229	mrpl40	84	62.573	ENSXETG00000018600	mrpl40	86	62.573	Xenopus_tropicalis
ENSCVAG00000018229	mrpl40	100	87.685	ENSXCOG00000002135	mrpl40	100	87.685	Xiphophorus_couchianus
ENSCVAG00000018229	mrpl40	100	87.192	ENSXMAG00000014595	mrpl40	100	87.192	Xiphophorus_maculatus