EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018327 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 7041 bases
Position: chrKL652739.1:626551-633591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030060	MMR_HSR1	PF01926.23	5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023618	-	1767	-	ENSCVAP00000030060	588 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000018327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018327	-	85	33.140	ENSCVAG00000004690	-	91	33.333
ENSCVAG00000018327	-	86	33.269	ENSCVAG00000007251	-	98	33.269
ENSCVAG00000018327	-	85	31.641	ENSCVAG00000007256	-	93	31.641
ENSCVAG00000018327	-	87	30.435	ENSCVAG00000008134	-	94	30.435
ENSCVAG00000018327	-	78	34.261	ENSCVAG00000005819	-	98	34.681
ENSCVAG00000018327	-	85	32.220	ENSCVAG00000007269	-	92	32.220
ENSCVAG00000018327	-	90	51.397	ENSCVAG00000011261	-	98	51.397
ENSCVAG00000018327	-	81	33.470	ENSCVAG00000007831	-	97	32.965
ENSCVAG00000018327	-	62	34.232	ENSCVAG00000014791	-	98	34.232
ENSCVAG00000018327	-	90	49.057	ENSCVAG00000008633	-	98	49.057
ENSCVAG00000018327	-	85	40.000	ENSCVAG00000007794	-	94	40.000
ENSCVAG00000018327	-	85	32.613	ENSCVAG00000009446	-	95	33.008
ENSCVAG00000018327	-	85	32.024	ENSCVAG00000007803	-	93	32.227
ENSCVAG00000018327	-	57	35.015	ENSCVAG00000022676	-	97	35.015
ENSCVAG00000018327	-	91	56.354	ENSCVAG00000015205	-	97	56.354

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018327	-	90	54.906	ENSAPOG00000015784	-	88	54.682	Acanthochromis_polyacanthus
ENSCVAG00000018327	-	83	56.468	ENSAPOG00000015792	-	87	56.468	Acanthochromis_polyacanthus
ENSCVAG00000018327	-	86	62.209	ENSACIG00000022228	-	87	62.209	Amphilophus_citrinellus
ENSCVAG00000018327	-	98	59.386	ENSACIG00000009923	-	94	59.556	Amphilophus_citrinellus
ENSCVAG00000018327	-	90	58.349	ENSAOCG00000015171	-	50	58.349	Amphiprion_ocellaris
ENSCVAG00000018327	-	91	58.318	ENSAPEG00000005793	-	99	58.318	Amphiprion_percula
ENSCVAG00000018327	-	91	60.634	ENSATEG00000009097	-	91	60.634	Anabas_testudineus
ENSCVAG00000018327	-	91	61.639	ENSACLG00000023474	-	97	61.639	Astatotilapia_calliptera
ENSCVAG00000018327	-	92	58.425	ENSACLG00000023481	-	97	58.425	Astatotilapia_calliptera
ENSCVAG00000018327	-	91	78.358	ENSFHEG00000011074	-	83	78.358	Fundulus_heteroclitus
ENSCVAG00000018327	-	91	61.852	ENSFHEG00000021969	-	98	61.852	Fundulus_heteroclitus
ENSCVAG00000018327	-	91	78.692	ENSFHEG00000008149	-	82	78.692	Fundulus_heteroclitus
ENSCVAG00000018327	-	92	60.806	ENSHBUG00000021307	-	97	60.806	Haplochromis_burtoni
ENSCVAG00000018327	-	91	60.773	ENSHBUG00000012995	-	97	60.773	Haplochromis_burtoni
ENSCVAG00000018327	-	91	64.112	ENSKMAG00000016981	-	85	64.112	Kryptolebias_marmoratus
ENSCVAG00000018327	-	91	63.235	ENSKMAG00000016903	-	73	63.235	Kryptolebias_marmoratus
ENSCVAG00000018327	-	86	42.353	ENSLACG00000008367	-	99	42.383	Latimeria_chalumnae
ENSCVAG00000018327	-	90	59.404	ENSMAMG00000015247	-	96	59.404	Mastacembelus_armatus
ENSCVAG00000018327	-	90	57.914	ENSMAMG00000015097	-	96	57.914	Mastacembelus_armatus
ENSCVAG00000018327	-	90	57.728	ENSMAMG00000015216	-	96	57.728	Mastacembelus_armatus
ENSCVAG00000018327	-	91	61.639	ENSMZEG00005020274	-	97	61.639	Maylandia_zebra
ENSCVAG00000018327	-	92	59.707	ENSMZEG00005020281	-	90	59.707	Maylandia_zebra
ENSCVAG00000018327	-	83	62.955	ENSNBRG00000016760	-	97	63.158	Neolamprologus_brichardi
ENSCVAG00000018327	-	85	63.074	ENSNBRG00000022932	-	90	63.074	Neolamprologus_brichardi
ENSCVAG00000018327	-	89	59.888	ENSNBRG00000016799	-	94	59.888	Neolamprologus_brichardi
ENSCVAG00000018327	-	82	63.843	ENSONIG00000012363	-	99	64.050	Oreochromis_niloticus
ENSCVAG00000018327	-	90	53.346	ENSPKIG00000009271	-	89	53.903	Paramormyrops_kingsleyae
ENSCVAG00000018327	-	90	52.416	ENSPKIG00000011996	-	94	52.788	Paramormyrops_kingsleyae
ENSCVAG00000018327	-	71	60.504	ENSPMGG00000000605	-	83	60.504	Periophthalmus_magnuspinnatus
ENSCVAG00000018327	-	89	61.742	ENSPFOG00000010758	-	83	61.742	Poecilia_formosa
ENSCVAG00000018327	-	89	61.582	ENSPLAG00000010093	-	70	61.582	Poecilia_latipinna
ENSCVAG00000018327	-	85	75.498	ENSPLAG00000005002	-	98	75.498	Poecilia_latipinna
ENSCVAG00000018327	-	91	76.360	ENSPLAG00000000406	-	99	76.360	Poecilia_latipinna
ENSCVAG00000018327	-	90	75.332	ENSPMEG00000015576	-	50	75.332	Poecilia_mexicana
ENSCVAG00000018327	-	91	76.923	ENSPMEG00000014712	-	82	76.923	Poecilia_mexicana
ENSCVAG00000018327	-	88	60.077	ENSPREG00000021204	-	96	60.345	Poecilia_reticulata
ENSCVAG00000018327	-	91	60.223	ENSSMAG00000004663	-	87	60.223	Scophthalmus_maximus
ENSCVAG00000018327	-	87	61.988	ENSSDUG00000004257	-	93	61.988	Seriola_dumerili
ENSCVAG00000018327	-	89	61.027	ENSSLDG00000021625	-	94	61.027	Seriola_lalandi_dorsalis
ENSCVAG00000018327	-	90	61.710	ENSSPAG00000003320	-	91	61.710	Stegastes_partitus
ENSCVAG00000018327	-	86	76.938	ENSXMAG00000023457	-	97	76.938	Xiphophorus_maculatus
ENSCVAG00000018327	-	91	76.548	ENSXMAG00000022709	-	82	76.548	Xiphophorus_maculatus