EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018360 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5305 bases
Position: chrKL654675.1:54384-59688
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015543	RVT_1	PF00078.27	6.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023661	-	1248	-	ENSCVAP00000015543	415 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000018360's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018360's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018360	-	87	36.740	ENSCVAG00000020933	-	81	36.740
ENSCVAG00000018360	-	69	51.228	ENSCVAG00000009961	-	56	51.228
ENSCVAG00000018360	-	85	34.734	ENSCVAG00000007707	-	52	34.734

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018360	-	60	45.382	ENSAPOG00000001366	-	69	45.382	Acanthochromis_polyacanthus
ENSCVAG00000018360	-	70	58.703	ENSAPOG00000015742	-	92	58.703	Acanthochromis_polyacanthus
ENSCVAG00000018360	-	79	38.720	ENSAPOG00000014771	-	76	38.720	Acanthochromis_polyacanthus
ENSCVAG00000018360	-	88	38.798	ENSACIG00000010538	-	95	38.798	Amphilophus_citrinellus
ENSCVAG00000018360	-	76	51.266	ENSAOCG00000000894	-	94	51.266	Amphiprion_ocellaris
ENSCVAG00000018360	-	82	46.921	ENSAOCG00000019069	-	93	46.921	Amphiprion_ocellaris
ENSCVAG00000018360	-	92	34.031	ENSAOCG00000006855	-	86	34.031	Amphiprion_ocellaris
ENSCVAG00000018360	-	91	42.782	ENSAOCG00000014605	-	76	42.782	Amphiprion_ocellaris
ENSCVAG00000018360	-	90	35.467	ENSAOCG00000012592	-	80	35.467	Amphiprion_ocellaris
ENSCVAG00000018360	-	72	32.107	ENSATEG00000019721	-	77	32.107	Anabas_testudineus
ENSCVAG00000018360	-	66	39.560	ENSACAG00000010816	-	76	39.560	Anolis_carolinensis
ENSCVAG00000018360	-	93	48.177	ENSACLG00000013571	-	95	48.177	Astatotilapia_calliptera
ENSCVAG00000018360	-	81	47.337	ENSACLG00000012857	-	92	47.337	Astatotilapia_calliptera
ENSCVAG00000018360	-	58	50.833	ENSACLG00000010837	-	59	50.833	Astatotilapia_calliptera
ENSCVAG00000018360	-	84	32.386	ENSACLG00000011319	-	91	32.386	Astatotilapia_calliptera
ENSCVAG00000018360	-	67	48.561	ENSAMXG00000040763	-	71	48.561	Astyanax_mexicanus
ENSCVAG00000018360	-	81	31.609	ENSAMXG00000035718	-	64	31.609	Astyanax_mexicanus
ENSCVAG00000018360	-	64	53.788	ENSAMXG00000041014	-	100	53.788	Astyanax_mexicanus
ENSCVAG00000018360	-	58	38.912	ENSCPBG00000017828	-	63	38.912	Chrysemys_picta_bellii
ENSCVAG00000018360	-	85	30.168	ENSELUG00000002589	-	75	30.168	Esox_lucius
ENSCVAG00000018360	-	74	31.290	ENSELUG00000000386	-	67	31.613	Esox_lucius
ENSCVAG00000018360	-	82	35.673	ENSELUG00000014378	-	81	35.673	Esox_lucius
ENSCVAG00000018360	-	73	30.263	ENSHBUG00000003796	-	71	30.263	Haplochromis_burtoni
ENSCVAG00000018360	-	76	32.812	ENSHBUG00000011715	-	80	32.812	Haplochromis_burtoni
ENSCVAG00000018360	-	89	45.161	ENSHBUG00000007736	-	89	45.161	Haplochromis_burtoni
ENSCVAG00000018360	-	59	33.333	ENSIPUG00000010242	-	65	33.333	Ictalurus_punctatus
ENSCVAG00000018360	-	93	87.949	ENSKMAG00000014393	-	92	87.949	Kryptolebias_marmoratus
ENSCVAG00000018360	-	74	46.926	ENSLBEG00000004148	-	65	46.926	Labrus_bergylta
ENSCVAG00000018360	-	80	43.373	ENSLBEG00000023714	-	88	43.373	Labrus_bergylta
ENSCVAG00000018360	-	90	42.091	ENSLBEG00000015758	-	55	42.091	Labrus_bergylta
ENSCVAG00000018360	-	80	40.785	ENSLBEG00000020242	-	90	40.785	Labrus_bergylta
ENSCVAG00000018360	-	87	31.694	ENSMZEG00005008304	-	85	31.694	Maylandia_zebra
ENSCVAG00000018360	-	87	31.694	ENSMZEG00005025877	-	85	31.694	Maylandia_zebra
ENSCVAG00000018360	-	67	57.706	ENSMZEG00005016362	-	98	57.706	Maylandia_zebra
ENSCVAG00000018360	-	90	57.067	ENSMZEG00005017030	-	71	57.067	Maylandia_zebra
ENSCVAG00000018360	-	56	50.855	ENSMZEG00005006211	-	58	50.855	Maylandia_zebra
ENSCVAG00000018360	-	90	57.067	ENSMZEG00005011529	-	70	57.067	Maylandia_zebra
ENSCVAG00000018360	-	69	30.796	ENSNBRG00000022130	-	69	30.796	Neolamprologus_brichardi
ENSCVAG00000018360	-	67	36.140	ENSNBRG00000013792	-	83	36.140	Neolamprologus_brichardi
ENSCVAG00000018360	-	93	47.396	ENSNBRG00000012595	-	87	47.396	Neolamprologus_brichardi
ENSCVAG00000018360	-	82	44.543	ENSNBRG00000000972	-	84	44.543	Neolamprologus_brichardi
ENSCVAG00000018360	-	90	50.133	ENSORLG00000024464	-	62	50.133	Oryzias_latipes
ENSCVAG00000018360	-	82	45.906	ENSORLG00000024236	-	90	45.906	Oryzias_latipes
ENSCVAG00000018360	-	66	52.920	ENSORLG00000028706	-	55	52.920	Oryzias_latipes
ENSCVAG00000018360	-	60	53.600	ENSORLG00000028976	-	65	53.600	Oryzias_latipes
ENSCVAG00000018360	-	83	52.312	ENSORLG00000023713	-	88	52.312	Oryzias_latipes
ENSCVAG00000018360	-	74	42.395	ENSORLG00000028454	-	98	42.395	Oryzias_latipes
ENSCVAG00000018360	-	67	49.640	ENSORLG00020018629	-	74	49.640	Oryzias_latipes_hni
ENSCVAG00000018360	-	67	48.921	ENSORLG00020007779	-	74	48.921	Oryzias_latipes_hni
ENSCVAG00000018360	-	92	53.806	ENSORLG00020014626	-	71	53.806	Oryzias_latipes_hni
ENSCVAG00000018360	-	60	53.600	ENSORLG00020007002	-	98	53.600	Oryzias_latipes_hni
ENSCVAG00000018360	-	62	55.212	ENSORLG00020022004	-	88	55.212	Oryzias_latipes_hni
ENSCVAG00000018360	-	74	31.169	ENSORLG00020004063	-	89	31.169	Oryzias_latipes_hni
ENSCVAG00000018360	-	76	46.667	ENSORLG00020014149	-	98	46.667	Oryzias_latipes_hni
ENSCVAG00000018360	-	67	35.943	ENSORLG00015008227	-	78	35.943	Oryzias_latipes_hsok
ENSCVAG00000018360	-	71	44.898	ENSORLG00015022393	-	98	44.898	Oryzias_latipes_hsok
ENSCVAG00000018360	-	74	47.883	ENSORLG00015000419	-	87	47.883	Oryzias_latipes_hsok
ENSCVAG00000018360	-	92	42.932	ENSORLG00015021206	-	72	42.932	Oryzias_latipes_hsok
ENSCVAG00000018360	-	51	51.415	ENSORLG00015007976	-	57	51.415	Oryzias_latipes_hsok
ENSCVAG00000018360	-	72	37.705	ENSORLG00015021848	-	99	37.705	Oryzias_latipes_hsok
ENSCVAG00000018360	-	87	38.736	ENSORLG00015020895	-	97	38.736	Oryzias_latipes_hsok
ENSCVAG00000018360	-	67	49.640	ENSORLG00015007703	-	71	49.640	Oryzias_latipes_hsok
ENSCVAG00000018360	-	90	34.133	ENSOMEG00000013211	-	86	34.133	Oryzias_melastigma
ENSCVAG00000018360	-	65	48.699	ENSPKIG00000013511	-	92	48.699	Paramormyrops_kingsleyae
ENSCVAG00000018360	-	63	59.615	ENSPKIG00000024018	-	93	59.615	Paramormyrops_kingsleyae
ENSCVAG00000018360	-	86	30.168	ENSPMGG00000014421	-	85	30.168	Periophthalmus_magnuspinnatus
ENSCVAG00000018360	-	87	32.514	ENSPLAG00000015080	-	86	32.514	Poecilia_latipinna
ENSCVAG00000018360	-	59	31.325	ENSPMEG00000004673	-	62	31.325	Poecilia_mexicana
ENSCVAG00000018360	-	84	33.048	ENSPREG00000004933	-	87	33.048	Poecilia_reticulata
ENSCVAG00000018360	-	90	87.166	ENSPREG00000006501	-	66	87.166	Poecilia_reticulata
ENSCVAG00000018360	-	82	35.484	ENSPREG00000010319	-	81	35.484	Poecilia_reticulata
ENSCVAG00000018360	-	89	30.728	ENSPREG00000021355	-	92	30.728	Poecilia_reticulata
ENSCVAG00000018360	-	86	38.655	ENSPREG00000001352	-	99	38.655	Poecilia_reticulata
ENSCVAG00000018360	-	72	45.973	ENSPNYG00000002466	-	99	45.973	Pundamilia_nyererei
ENSCVAG00000018360	-	71	38.567	ENSPNYG00000023697	-	68	38.567	Pundamilia_nyererei
ENSCVAG00000018360	-	92	34.115	ENSPNAG00000024211	-	81	34.115	Pygocentrus_nattereri
ENSCVAG00000018360	-	82	42.522	ENSPNAG00000024749	-	80	42.522	Pygocentrus_nattereri
ENSCVAG00000018360	-	87	42.222	ENSPNAG00000002786	-	88	42.222	Pygocentrus_nattereri
ENSCVAG00000018360	-	71	43.197	ENSPNAG00000010342	-	94	43.197	Pygocentrus_nattereri
ENSCVAG00000018360	-	67	50.360	ENSPNAG00000014375	-	68	50.360	Pygocentrus_nattereri
ENSCVAG00000018360	-	67	37.209	ENSPNAG00000010780	-	66	37.209	Pygocentrus_nattereri
ENSCVAG00000018360	-	96	41.562	ENSSMAG00000014015	-	80	41.562	Scophthalmus_maximus
ENSCVAG00000018360	-	79	31.515	ENSSDUG00000015364	-	71	31.515	Seriola_dumerili
ENSCVAG00000018360	-	72	47.475	ENSSDUG00000021791	-	99	47.475	Seriola_dumerili
ENSCVAG00000018360	-	66	34.545	ENSSDUG00000017945	-	76	34.545	Seriola_dumerili
ENSCVAG00000018360	-	91	37.302	ENSSLDG00000006955	-	91	37.302	Seriola_lalandi_dorsalis
ENSCVAG00000018360	-	89	42.627	ENSSPUG00000015446	-	83	42.627	Sphenodon_punctatus
ENSCVAG00000018360	-	82	54.252	ENSSPAG00000000151	-	74	54.252	Stegastes_partitus
ENSCVAG00000018360	-	75	34.936	ENSSPAG00000012089	-	84	34.936	Stegastes_partitus
ENSCVAG00000018360	-	90	42.287	ENSSPAG00000009351	-	59	42.287	Stegastes_partitus
ENSCVAG00000018360	-	90	39.633	ENSXETG00000034134	-	51	39.633	Xenopus_tropicalis
ENSCVAG00000018360	-	89	36.927	ENSXETG00000030860	-	52	36.927	Xenopus_tropicalis
ENSCVAG00000018360	-	94	35.838	ENSXETG00000032308	-	50	35.838	Xenopus_tropicalis
ENSCVAG00000018360	-	71	39.456	ENSXCOG00000016894	-	87	39.456	Xiphophorus_couchianus
ENSCVAG00000018360	-	69	45.139	ENSXMAG00000026184	-	96	45.139	Xiphophorus_maculatus
ENSCVAG00000018360	-	89	30.914	ENSXMAG00000023211	-	82	30.914	Xiphophorus_maculatus