EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018494 (Gene tree)
Gene ID: 107104119
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 37-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 15848 bases
Position: chrKL654120.1:77130-92977
Accession: 107104119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030159	zf-C2H2	PF00096.26	1.1e-30	1	4
ENSCVAP00000030159	zf-C2H2	PF00096.26	1.1e-30	2	4
ENSCVAP00000030159	zf-C2H2	PF00096.26	1.1e-30	3	4
ENSCVAP00000030159	zf-C2H2	PF00096.26	1.1e-30	4	4
ENSCVAP00000030159	zf-met	PF12874.7	8.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000031617	-	3054	XM_015404038	ENSCVAP00000030159	658 (aa)	XP_015259524	UPI000742BF92

Gene Model

Click here to download ENSCVAG00000018494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018494	-	51	33.761	ENSCVAG00000013692	prdm5	85	33.761
ENSCVAG00000018494	-	56	31.718	ENSCVAG00000004958	-	88	31.439
ENSCVAG00000018494	-	59	33.918	ENSCVAG00000000351	-	56	33.000
ENSCVAG00000018494	-	54	34.222	ENSCVAG00000016098	-	96	34.222
ENSCVAG00000018494	-	58	36.842	ENSCVAG00000000227	-	77	39.394
ENSCVAG00000018494	-	50	43.333	ENSCVAG00000018383	-	95	43.333
ENSCVAG00000018494	-	50	40.000	ENSCVAG00000022991	-	90	39.655
ENSCVAG00000018494	-	50	44.828	ENSCVAG00000004508	-	84	45.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018494	-	50	32.515	ENSKMAG00000000520	-	75	32.515	Kryptolebias_marmoratus
ENSCVAG00000018494	-	50	34.597	ENSORLG00020009554	-	80	34.597	Oryzias_latipes_hni
ENSCVAG00000018494	-	98	38.628	ENSOMEG00000021397	-	89	38.462	Oryzias_melastigma
ENSCVAG00000018494	-	52	41.667	ENSPLAG00000009651	-	88	43.396	Poecilia_latipinna
ENSCVAG00000018494	-	58	42.697	ENSPMEG00000023113	-	88	42.697	Poecilia_mexicana