EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018527 (Gene tree)
Gene ID: 107082378
Gene Symbol: polr1d
Alias: im:7162148|zgc:136449
Full Name: DNA-directed RNA polymerases I and III subunit RPAC2-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 16209 bases
Position: chrKL652552.1:1077237-1093445
Accession: 107082378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000030173	RNA_pol_L_2	PF13656.6	5.6e-31	1	1
ENSCVAP00000030173	RNA_pol_L	PF01193.24	1.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023938	-	928	XM_015371042	ENSCVAP00000030173	114 (aa)	XP_015226528	UPI0007426B9B

Gene Model

Click here to download ENSCVAG00000018527's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018527's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018527	polr1d	79	34.444	ENSCVAG00000014267	polr2j	76	34.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018527	polr1d	92	71.429	ENSG00000186184	POLR1D	91	71.429	Homo_sapiens
ENSCVAG00000018527	polr1d	89	84.314	ENSAPOG00000021882	polr1d	96	84.314	Acanthochromis_polyacanthus
ENSCVAG00000018527	polr1d	92	72.381	ENSAMEG00000019095	POLR1D	84	72.381	Ailuropoda_melanoleuca
ENSCVAG00000018527	polr1d	100	83.478	ENSACIG00000013328	polr1d	100	83.478	Amphilophus_citrinellus
ENSCVAG00000018527	polr1d	100	83.333	ENSAOCG00000018500	polr1d	100	83.333	Amphiprion_ocellaris
ENSCVAG00000018527	polr1d	100	84.211	ENSAPEG00000009489	polr1d	100	84.211	Amphiprion_percula
ENSCVAG00000018527	polr1d	100	82.456	ENSATEG00000019322	polr1d	100	82.456	Anabas_testudineus
ENSCVAG00000018527	polr1d	97	68.468	ENSACAG00000015753	POLR1D	96	68.468	Anolis_carolinensis
ENSCVAG00000018527	polr1d	92	71.429	ENSANAG00000024486	POLR1D	79	71.429	Aotus_nancymaae
ENSCVAG00000018527	polr1d	100	85.965	ENSACLG00000023805	polr1d	100	85.965	Astatotilapia_calliptera
ENSCVAG00000018527	polr1d	99	77.876	ENSAMXG00000036118	polr1d	98	77.876	Astyanax_mexicanus
ENSCVAG00000018527	polr1d	92	73.333	ENSBTAG00000008642	POLR1D	79	73.333	Bos_taurus
ENSCVAG00000018527	polr1d	92	73.333	ENSBTAG00000033252	-	79	73.333	Bos_taurus
ENSCVAG00000018527	polr1d	70	40.000	WBGene00010230	rpac-19	56	40.000	Caenorhabditis_elegans
ENSCVAG00000018527	polr1d	92	70.476	ENSCJAG00000044669	POLR1D	79	70.476	Callithrix_jacchus
ENSCVAG00000018527	polr1d	92	72.381	ENSCAFG00000006755	POLR1D	79	72.381	Canis_familiaris
ENSCVAG00000018527	polr1d	92	72.381	ENSCHIG00000021910	POLR1D	79	72.381	Capra_hircus
ENSCVAG00000018527	polr1d	91	72.115	ENSTSYG00000026817	-	78	72.115	Carlito_syrichta
ENSCVAG00000018527	polr1d	91	61.321	ENSTSYG00000034852	-	88	61.321	Carlito_syrichta
ENSCVAG00000018527	polr1d	56	59.375	ENSCAPG00000006058	-	65	59.375	Cavia_aperea
ENSCVAG00000018527	polr1d	56	59.375	ENSCPOG00000030450	-	65	59.375	Cavia_porcellus
ENSCVAG00000018527	polr1d	92	55.238	ENSCCAG00000020191	-	76	55.238	Cebus_capucinus
ENSCVAG00000018527	polr1d	92	72.381	ENSCCAG00000021349	-	79	72.381	Cebus_capucinus
ENSCVAG00000018527	polr1d	92	60.000	ENSCATG00000022900	-	78	60.000	Cercocebus_atys
ENSCVAG00000018527	polr1d	92	71.429	ENSCATG00000030710	-	79	71.429	Cercocebus_atys
ENSCVAG00000018527	polr1d	92	71.429	ENSCLAG00000017623	POLR1D	85	71.429	Chinchilla_lanigera
ENSCVAG00000018527	polr1d	89	78.218	ENSCPBG00000004719	POLR1D	100	78.218	Chrysemys_picta_bellii
ENSCVAG00000018527	polr1d	92	71.429	ENSCANG00000028632	-	79	71.429	Colobus_angolensis_palliatus
ENSCVAG00000018527	polr1d	92	68.571	ENSCANG00000037694	-	79	68.571	Colobus_angolensis_palliatus
ENSCVAG00000018527	polr1d	92	72.381	ENSCGRG00001021251	Polr1d	79	72.381	Cricetulus_griseus_chok1gshd
ENSCVAG00000018527	polr1d	92	72.381	ENSCGRG00000011639	Polr1d	79	72.381	Cricetulus_griseus_crigri
ENSCVAG00000018527	polr1d	93	83.019	ENSCSEG00000018268	polr1d	95	81.081	Cynoglossus_semilaevis
ENSCVAG00000018527	polr1d	95	73.148	ENSDARG00000037570	polr1d	96	73.148	Danio_rerio
ENSCVAG00000018527	polr1d	98	66.071	ENSDNOG00000046247	-	84	66.071	Dasypus_novemcinctus
ENSCVAG00000018527	polr1d	98	66.964	ENSDNOG00000043676	-	84	66.964	Dasypus_novemcinctus
ENSCVAG00000018527	polr1d	92	71.429	ENSDORG00000029155	Polr1d	79	71.429	Dipodomys_ordii
ENSCVAG00000018527	polr1d	84	44.792	FBgn0086447	l(2)37Cg	90	44.792	Drosophila_melanogaster
ENSCVAG00000018527	polr1d	92	71.429	ENSETEG00000012797	POLR1D	85	71.429	Echinops_telfairi
ENSCVAG00000018527	polr1d	81	63.043	ENSEBUG00000011748	polr1d	64	63.043	Eptatretus_burgeri
ENSCVAG00000018527	polr1d	96	70.642	ENSEASG00005022487	POLR1D	84	70.642	Equus_asinus_asinus
ENSCVAG00000018527	polr1d	92	72.381	ENSEEUG00000013144	POLR1D	85	72.381	Erinaceus_europaeus
ENSCVAG00000018527	polr1d	89	82.178	ENSELUG00000005105	rpac2	89	82.178	Esox_lucius
ENSCVAG00000018527	polr1d	92	72.381	ENSFCAG00000030162	POLR1D	79	72.381	Felis_catus
ENSCVAG00000018527	polr1d	88	75.000	ENSFALG00000011463	POLR1D	99	75.000	Ficedula_albicollis
ENSCVAG00000018527	polr1d	92	70.476	ENSFDAG00000004463	POLR1D	79	70.476	Fukomys_damarensis
ENSCVAG00000018527	polr1d	100	91.228	ENSFHEG00000015410	polr1d	99	91.228	Fundulus_heteroclitus
ENSCVAG00000018527	polr1d	61	66.667	ENSGALG00000007470	POLR1D	68	66.667	Gallus_gallus
ENSCVAG00000018527	polr1d	100	90.351	ENSGAFG00000001693	polr1d	100	90.351	Gambusia_affinis
ENSCVAG00000018527	polr1d	94	85.981	ENSGACG00000018585	polr1d	91	85.981	Gasterosteus_aculeatus
ENSCVAG00000018527	polr1d	100	77.193	ENSGAGG00000008503	POLR1D	100	77.193	Gopherus_agassizii
ENSCVAG00000018527	polr1d	92	71.429	ENSGGOG00000004235	POLR1D	79	71.429	Gorilla_gorilla
ENSCVAG00000018527	polr1d	100	85.965	ENSHBUG00000002111	polr1d	100	85.965	Haplochromis_burtoni
ENSCVAG00000018527	polr1d	92	69.524	ENSHGLG00000003202	POLR1D	79	69.524	Heterocephalus_glaber_female
ENSCVAG00000018527	polr1d	92	69.524	ENSHGLG00100009393	POLR1D	79	69.524	Heterocephalus_glaber_male
ENSCVAG00000018527	polr1d	100	80.702	ENSHCOG00000003258	polr1d	100	80.702	Hippocampus_comes
ENSCVAG00000018527	polr1d	99	76.106	ENSIPUG00000014810	polr1d	98	76.106	Ictalurus_punctatus
ENSCVAG00000018527	polr1d	92	71.429	ENSSTOG00000013877	POLR1D	79	71.429	Ictidomys_tridecemlineatus
ENSCVAG00000018527	polr1d	96	54.545	ENSJJAG00000021667	-	63	54.545	Jaculus_jaculus
ENSCVAG00000018527	polr1d	92	70.476	ENSJJAG00000022671	-	88	70.476	Jaculus_jaculus
ENSCVAG00000018527	polr1d	100	85.965	ENSKMAG00000015256	polr1d	100	85.965	Kryptolebias_marmoratus
ENSCVAG00000018527	polr1d	100	85.088	ENSLBEG00000015919	polr1d	100	85.088	Labrus_bergylta
ENSCVAG00000018527	polr1d	92	69.524	ENSLACG00000006810	POLR1D	88	69.524	Latimeria_chalumnae
ENSCVAG00000018527	polr1d	62	81.690	ENSLOCG00000014976	polr1d	96	81.690	Lepisosteus_oculatus
ENSCVAG00000018527	polr1d	92	71.429	ENSLAFG00000032290	POLR1D	79	71.429	Loxodonta_africana
ENSCVAG00000018527	polr1d	92	71.429	ENSMFAG00000045264	POLR1D	81	71.429	Macaca_fascicularis
ENSCVAG00000018527	polr1d	92	71.429	ENSMMUG00000020386	POLR1D	91	71.429	Macaca_mulatta
ENSCVAG00000018527	polr1d	69	68.354	ENSMMUG00000041570	-	71	68.354	Macaca_mulatta
ENSCVAG00000018527	polr1d	69	67.089	ENSMNEG00000038120	-	66	67.089	Macaca_nemestrina
ENSCVAG00000018527	polr1d	92	71.429	ENSMNEG00000008630	-	79	71.429	Macaca_nemestrina
ENSCVAG00000018527	polr1d	92	71.429	ENSMLEG00000041048	-	79	71.429	Mandrillus_leucophaeus
ENSCVAG00000018527	polr1d	92	61.905	ENSMLEG00000032251	-	78	61.905	Mandrillus_leucophaeus
ENSCVAG00000018527	polr1d	88	86.000	ENSMAMG00000014834	polr1d	93	86.000	Mastacembelus_armatus
ENSCVAG00000018527	polr1d	91	83.654	ENSMZEG00005006638	polr1d	92	83.654	Maylandia_zebra
ENSCVAG00000018527	polr1d	88	75.000	ENSMGAG00000005322	POLR1D	95	75.000	Meleagris_gallopavo
ENSCVAG00000018527	polr1d	92	72.381	ENSMAUG00000001946	Polr1d	79	72.381	Mesocricetus_auratus
ENSCVAG00000018527	polr1d	92	57.143	ENSMICG00000007349	-	78	57.143	Microcebus_murinus
ENSCVAG00000018527	polr1d	92	71.429	ENSMICG00000016883	-	79	71.429	Microcebus_murinus
ENSCVAG00000018527	polr1d	92	71.429	ENSMOCG00000021288	Polr1d	79	71.429	Microtus_ochrogaster
ENSCVAG00000018527	polr1d	100	87.719	ENSMMOG00000009605	polr1d	100	87.719	Mola_mola
ENSCVAG00000018527	polr1d	100	72.807	ENSMODG00000023881	POLR1D	100	72.807	Monodelphis_domestica
ENSCVAG00000018527	polr1d	100	82.456	ENSMALG00000010652	polr1d	100	82.456	Monopterus_albus
ENSCVAG00000018527	polr1d	91	70.192	MGP_CAROLIEiJ_G0028034	Polr1d	78	70.192	Mus_caroli
ENSCVAG00000018527	polr1d	91	70.192	ENSMUSG00000029642	Polr1d	78	70.192	Mus_musculus
ENSCVAG00000018527	polr1d	91	70.192	MGP_PahariEiJ_G0024600	Polr1d	78	70.192	Mus_pahari
ENSCVAG00000018527	polr1d	91	69.231	MGP_SPRETEiJ_G0029032	Polr1d	78	69.231	Mus_spretus
ENSCVAG00000018527	polr1d	92	71.429	ENSMLUG00000027169	-	79	71.429	Myotis_lucifugus
ENSCVAG00000018527	polr1d	92	65.714	ENSMLUG00000004118	-	79	65.714	Myotis_lucifugus
ENSCVAG00000018527	polr1d	98	69.643	ENSNGAG00000006014	Polr1d	97	69.643	Nannospalax_galili
ENSCVAG00000018527	polr1d	100	85.965	ENSNBRG00000020327	polr1d	100	85.965	Neolamprologus_brichardi
ENSCVAG00000018527	polr1d	92	71.429	ENSNLEG00000000358	POLR1D	79	71.429	Nomascus_leucogenys
ENSCVAG00000018527	polr1d	92	60.000	ENSODEG00000014801	-	76	60.000	Octodon_degus
ENSCVAG00000018527	polr1d	92	71.429	ENSODEG00000005294	-	79	71.429	Octodon_degus
ENSCVAG00000018527	polr1d	94	76.636	ENSOANG00000008708	-	99	76.636	Ornithorhynchus_anatinus
ENSCVAG00000018527	polr1d	92	71.429	ENSOCUG00000015706	POLR1D	64	71.429	Oryctolagus_cuniculus
ENSCVAG00000018527	polr1d	100	84.211	ENSORLG00000010257	polr1d	100	84.211	Oryzias_latipes
ENSCVAG00000018527	polr1d	100	84.211	ENSORLG00020000533	polr1d	77	84.211	Oryzias_latipes_hni
ENSCVAG00000018527	polr1d	100	85.088	ENSORLG00015013267	polr1d	75	85.088	Oryzias_latipes_hsok
ENSCVAG00000018527	polr1d	100	82.456	ENSOMEG00000014912	polr1d	76	82.456	Oryzias_melastigma
ENSCVAG00000018527	polr1d	92	71.429	ENSOGAG00000014601	POLR1D	79	71.429	Otolemur_garnettii
ENSCVAG00000018527	polr1d	92	72.381	ENSOARG00000017005	POLR1D	81	72.381	Ovis_aries
ENSCVAG00000018527	polr1d	98	67.857	ENSPPAG00000028138	POLR1D	84	67.857	Pan_paniscus
ENSCVAG00000018527	polr1d	92	72.381	ENSPPRG00000003381	POLR1D	79	72.381	Panthera_pardus
ENSCVAG00000018527	polr1d	92	72.381	ENSPTIG00000018137	POLR1D	79	72.381	Panthera_tigris_altaica
ENSCVAG00000018527	polr1d	92	71.429	ENSPTRG00000005734	POLR1D	79	71.429	Pan_troglodytes
ENSCVAG00000018527	polr1d	92	60.952	ENSPANG00000035051	-	78	60.952	Papio_anubis
ENSCVAG00000018527	polr1d	92	71.429	ENSPANG00000020259	-	79	71.429	Papio_anubis
ENSCVAG00000018527	polr1d	89	80.198	ENSPKIG00000021891	polr1d	94	62.185	Paramormyrops_kingsleyae
ENSCVAG00000018527	polr1d	100	74.561	ENSPSIG00000011822	POLR1D	88	74.561	Pelodiscus_sinensis
ENSCVAG00000018527	polr1d	100	73.684	ENSPMGG00000012998	POLR1D	84	73.684	Periophthalmus_magnuspinnatus
ENSCVAG00000018527	polr1d	100	82.456	ENSPMGG00000010359	polr1d	99	82.456	Periophthalmus_magnuspinnatus
ENSCVAG00000018527	polr1d	92	70.476	ENSPEMG00000006336	-	81	70.476	Peromyscus_maniculatus_bairdii
ENSCVAG00000018527	polr1d	95	57.407	ENSPMAG00000004228	polr1d	91	57.407	Petromyzon_marinus
ENSCVAG00000018527	polr1d	100	71.930	ENSPCIG00000001673	POLR1D	100	71.930	Phascolarctos_cinereus
ENSCVAG00000018527	polr1d	100	91.228	ENSPFOG00000023343	polr1d	100	91.228	Poecilia_formosa
ENSCVAG00000018527	polr1d	100	91.228	ENSPLAG00000009675	polr1d	100	91.228	Poecilia_latipinna
ENSCVAG00000018527	polr1d	100	91.228	ENSPMEG00000004628	polr1d	100	91.228	Poecilia_mexicana
ENSCVAG00000018527	polr1d	100	91.228	ENSPREG00000022032	polr1d	100	91.228	Poecilia_reticulata
ENSCVAG00000018527	polr1d	92	70.476	ENSPCOG00000028175	POLR1D	79	70.476	Propithecus_coquereli
ENSCVAG00000018527	polr1d	100	85.965	ENSPNYG00000000107	polr1d	100	85.965	Pundamilia_nyererei
ENSCVAG00000018527	polr1d	96	74.312	ENSPNAG00000001512	polr1d	95	72.566	Pygocentrus_nattereri
ENSCVAG00000018527	polr1d	92	67.619	ENSRBIG00000000336	-	79	67.619	Rhinopithecus_bieti
ENSCVAG00000018527	polr1d	92	71.429	ENSRBIG00000036378	-	79	71.429	Rhinopithecus_bieti
ENSCVAG00000018527	polr1d	92	68.571	ENSRROG00000026751	-	79	68.571	Rhinopithecus_roxellana
ENSCVAG00000018527	polr1d	92	71.429	ENSRROG00000042232	-	79	71.429	Rhinopithecus_roxellana
ENSCVAG00000018527	polr1d	79	54.444	YNL113W	RPC19	63	54.444	Saccharomyces_cerevisiae
ENSCVAG00000018527	polr1d	92	71.429	ENSSBOG00000028482	-	79	71.429	Saimiri_boliviensis_boliviensis
ENSCVAG00000018527	polr1d	87	67.677	ENSSBOG00000030146	-	73	67.677	Saimiri_boliviensis_boliviensis
ENSCVAG00000018527	polr1d	97	71.171	ENSSHAG00000001190	POLR1D	86	71.171	Sarcophilus_harrisii
ENSCVAG00000018527	polr1d	93	80.189	ENSSFOG00015011375	polr1d	93	80.189	Scleropages_formosus
ENSCVAG00000018527	polr1d	100	83.333	ENSSMAG00000011861	polr1d	100	83.333	Scophthalmus_maximus
ENSCVAG00000018527	polr1d	100	82.456	ENSSDUG00000011930	polr1d	100	82.456	Seriola_dumerili
ENSCVAG00000018527	polr1d	99	75.439	ENSSLDG00000023871	polr1d	97	75.439	Seriola_lalandi_dorsalis
ENSCVAG00000018527	polr1d	92	72.381	ENSSARG00000007840	POLR1D	79	72.381	Sorex_araneus
ENSCVAG00000018527	polr1d	92	73.333	ENSSPUG00000005786	POLR1D	95	70.270	Sphenodon_punctatus
ENSCVAG00000018527	polr1d	100	85.088	ENSSPAG00000011764	polr1d	100	85.088	Stegastes_partitus
ENSCVAG00000018527	polr1d	92	71.429	ENSSSCG00000009310	POLR1D	79	71.429	Sus_scrofa
ENSCVAG00000018527	polr1d	82	78.495	ENSTGUG00000005450	POLR1D	97	78.495	Taeniopygia_guttata
ENSCVAG00000018527	polr1d	100	80.702	ENSTRUG00000019741	polr1d	100	80.702	Takifugu_rubripes
ENSCVAG00000018527	polr1d	98	67.857	ENSTBEG00000007006	POLR1D	90	67.857	Tupaia_belangeri
ENSCVAG00000018527	polr1d	92	72.381	ENSUAMG00000011413	POLR1D	79	72.381	Ursus_americanus
ENSCVAG00000018527	polr1d	92	72.381	ENSUMAG00000016968	POLR1D	82	72.381	Ursus_maritimus
ENSCVAG00000018527	polr1d	92	72.381	ENSVVUG00000009216	POLR1D	79	72.381	Vulpes_vulpes
ENSCVAG00000018527	polr1d	89	91.089	ENSXCOG00000011731	polr1d	78	91.089	Xiphophorus_couchianus
ENSCVAG00000018527	polr1d	89	92.079	ENSXMAG00000017538	polr1d	78	92.079	Xiphophorus_maculatus