EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000018571 (Gene tree)
Gene ID: 107091921
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: tristetraprolin-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 2949 bases
Position: chrKL652857.1:134242-137190
Accession: 107091921
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000015728	zf-CCCH	PF00642.24	9.8e-21	1	2
ENSCVAP00000015728	zf-CCCH	PF00642.24	9.8e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000023896	-	2774	XM_015386153	ENSCVAP00000015728	414 (aa)	XP_015241639	UPI0007429B77

Gene Model

Click here to download ENSCVAG00000018571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000018571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000018571	zgc:162730	90	38.424	ENSCVAG00000009207	sb:cb81	80	40.054

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000018571	zgc:162730	100	74.883	ENSAPOG00000014920	zgc:162730	100	75.587	Acanthochromis_polyacanthus
ENSCVAG00000018571	zgc:162730	82	38.655	ENSAPOG00000011209	sb:cb81	84	39.227	Acanthochromis_polyacanthus
ENSCVAG00000018571	zgc:162730	57	67.355	ENSACIG00000017366	zgc:162730	97	67.355	Amphilophus_citrinellus
ENSCVAG00000018571	zgc:162730	99	35.116	ENSAOCG00000024158	sb:cb81	80	38.746	Amphiprion_ocellaris
ENSCVAG00000018571	zgc:162730	100	74.413	ENSAOCG00000002001	zgc:162730	100	75.117	Amphiprion_ocellaris
ENSCVAG00000018571	zgc:162730	94	75.312	ENSAPEG00000015490	zgc:162730	99	76.060	Amphiprion_percula
ENSCVAG00000018571	zgc:162730	99	35.349	ENSAPEG00000022405	sb:cb81	80	39.031	Amphiprion_percula
ENSCVAG00000018571	zgc:162730	99	37.020	ENSATEG00000003462	sb:cb81	78	38.017	Anabas_testudineus
ENSCVAG00000018571	zgc:162730	100	69.626	ENSATEG00000008790	zgc:162730	100	71.028	Anabas_testudineus
ENSCVAG00000018571	zgc:162730	100	69.811	ENSACLG00000022112	zgc:162730	100	69.104	Astatotilapia_calliptera
ENSCVAG00000018571	zgc:162730	100	46.429	ENSAMXG00000035945	zgc:162730	99	45.585	Astyanax_mexicanus
ENSCVAG00000018571	zgc:162730	70	42.258	ENSAMXG00000034874	sb:cb81	97	36.652	Astyanax_mexicanus
ENSCVAG00000018571	zgc:162730	98	66.508	ENSCSEG00000018283	zgc:162730	100	62.796	Cynoglossus_semilaevis
ENSCVAG00000018571	zgc:162730	90	37.650	ENSCSEG00000014426	sb:cb81	66	37.302	Cynoglossus_semilaevis
ENSCVAG00000018571	zgc:162730	87	45.968	ENSDARG00000103720	zgc:162730	84	49.560	Danio_rerio
ENSCVAG00000018571	zgc:162730	70	36.482	ENSDARG00000040725	zgc:114130	57	38.346	Danio_rerio
ENSCVAG00000018571	zgc:162730	100	52.607	ENSELUG00000013158	zgc:162730	100	54.265	Esox_lucius
ENSCVAG00000018571	zgc:162730	67	37.943	ENSELUG00000013151	zgc:114130	68	34.405	Esox_lucius
ENSCVAG00000018571	zgc:162730	100	83.493	ENSFHEG00000013710	zgc:162730	100	83.971	Fundulus_heteroclitus
ENSCVAG00000018571	zgc:162730	65	43.554	ENSFHEG00000022187	sb:cb81	79	38.674	Fundulus_heteroclitus
ENSCVAG00000018571	zgc:162730	79	62.908	ENSGMOG00000017242	zgc:162730	99	63.798	Gadus_morhua
ENSCVAG00000018571	zgc:162730	80	40.741	ENSGAFG00000015700	sb:cb81	76	40.816	Gambusia_affinis
ENSCVAG00000018571	zgc:162730	100	85.407	ENSGAFG00000009953	zgc:162730	100	85.885	Gambusia_affinis
ENSCVAG00000018571	zgc:162730	82	38.950	ENSGACG00000013400	sb:cb81	98	38.889	Gasterosteus_aculeatus
ENSCVAG00000018571	zgc:162730	79	68.546	ENSGACG00000008351	zgc:162730	99	69.436	Gasterosteus_aculeatus
ENSCVAG00000018571	zgc:162730	100	69.811	ENSHBUG00000015057	zgc:162730	100	69.104	Haplochromis_burtoni
ENSCVAG00000018571	zgc:162730	100	68.213	ENSHCOG00000015801	zgc:162730	100	69.444	Hippocampus_comes
ENSCVAG00000018571	zgc:162730	100	44.418	ENSIPUG00000018248	zgc:162730	100	44.656	Ictalurus_punctatus
ENSCVAG00000018571	zgc:162730	64	39.427	ENSIPUG00000011378	sb:cb81	81	38.547	Ictalurus_punctatus
ENSCVAG00000018571	zgc:162730	80	40.669	ENSKMAG00000009884	sb:cb81	77	39.437	Kryptolebias_marmoratus
ENSCVAG00000018571	zgc:162730	100	75.177	ENSKMAG00000019277	zgc:162730	100	75.177	Kryptolebias_marmoratus
ENSCVAG00000018571	zgc:162730	100	67.442	ENSLBEG00000018380	zgc:162730	100	68.140	Labrus_bergylta
ENSCVAG00000018571	zgc:162730	65	39.636	ENSLBEG00000018376	sb:cb81	75	36.286	Labrus_bergylta
ENSCVAG00000018571	zgc:162730	73	36.716	ENSLBEG00000018387	zgc:114130	65	41.297	Labrus_bergylta
ENSCVAG00000018571	zgc:162730	99	37.647	ENSLACG00000015732	sb:cb81	97	36.105	Latimeria_chalumnae
ENSCVAG00000018571	zgc:162730	100	38.337	ENSLACG00000015980	-	100	39.030	Latimeria_chalumnae
ENSCVAG00000018571	zgc:162730	99	37.647	ENSLOCG00000014587	sb:cb81	97	38.443	Lepisosteus_oculatus
ENSCVAG00000018571	zgc:162730	100	47.209	ENSLOCG00000014597	zgc:162730	100	48.260	Lepisosteus_oculatus
ENSCVAG00000018571	zgc:162730	65	40.476	ENSMAMG00000020144	sb:cb81	70	38.736	Mastacembelus_armatus
ENSCVAG00000018571	zgc:162730	72	36.957	ENSMAMG00000007511	zgc:114130	58	40.076	Mastacembelus_armatus
ENSCVAG00000018571	zgc:162730	100	71.096	ENSMAMG00000007516	zgc:162730	99	72.261	Mastacembelus_armatus
ENSCVAG00000018571	zgc:162730	100	64.286	ENSMZEG00005014415	zgc:162730	97	69.008	Maylandia_zebra
ENSCVAG00000018571	zgc:162730	59	70.565	ENSMMOG00000011506	zgc:162730	99	71.774	Mola_mola
ENSCVAG00000018571	zgc:162730	65	43.416	ENSMMOG00000010073	sb:cb81	66	42.701	Mola_mola
ENSCVAG00000018571	zgc:162730	50	44.131	ENSMMOG00000011504	zgc:114130	54	43.689	Mola_mola
ENSCVAG00000018571	zgc:162730	100	66.744	ENSMALG00000002348	zgc:162730	100	69.070	Monopterus_albus
ENSCVAG00000018571	zgc:162730	64	76.923	ENSMALG00000021140	-	96	76.923	Monopterus_albus
ENSCVAG00000018571	zgc:162730	100	69.811	ENSNBRG00000013701	zgc:162730	100	69.104	Neolamprologus_brichardi
ENSCVAG00000018571	zgc:162730	83	67.435	ENSONIG00000005003	zgc:162730	100	67.435	Oreochromis_niloticus
ENSCVAG00000018571	zgc:162730	99	35.963	ENSORLG00000024026	sb:cb81	67	41.551	Oryzias_latipes
ENSCVAG00000018571	zgc:162730	99	59.338	ENSORLG00000027149	zgc:162730	100	61.520	Oryzias_latipes
ENSCVAG00000018571	zgc:162730	99	60.095	ENSORLG00020020289	zgc:162730	100	61.995	Oryzias_latipes_hni
ENSCVAG00000018571	zgc:162730	99	35.897	ENSORLG00020021084	sb:cb81	78	41.389	Oryzias_latipes_hni
ENSCVAG00000018571	zgc:162730	99	60.377	ENSORLG00015001519	zgc:162730	100	62.322	Oryzias_latipes_hsok
ENSCVAG00000018571	zgc:162730	99	36.597	ENSORLG00015010105	sb:cb81	78	41.783	Oryzias_latipes_hsok
ENSCVAG00000018571	zgc:162730	60	39.759	ENSOMEG00000020565	sb:cb81	77	39.943	Oryzias_melastigma
ENSCVAG00000018571	zgc:162730	99	62.322	ENSOMEG00000017752	zgc:162730	100	62.796	Oryzias_melastigma
ENSCVAG00000018571	zgc:162730	80	39.093	ENSPFOG00000013806	sb:cb81	78	39.377	Poecilia_formosa
ENSCVAG00000018571	zgc:162730	100	83.971	ENSPFOG00000003665	zgc:162730	100	84.450	Poecilia_formosa
ENSCVAG00000018571	zgc:162730	80	39.535	ENSPLAG00000020158	sb:cb81	85	39.660	Poecilia_latipinna
ENSCVAG00000018571	zgc:162730	100	84.211	ENSPLAG00000000946	zgc:162730	100	84.689	Poecilia_latipinna
ENSCVAG00000018571	zgc:162730	100	84.689	ENSPMEG00000000341	zgc:162730	100	85.167	Poecilia_mexicana
ENSCVAG00000018571	zgc:162730	80	39.093	ENSPMEG00000022425	sb:cb81	78	39.377	Poecilia_mexicana
ENSCVAG00000018571	zgc:162730	100	84.689	ENSPREG00000021263	zgc:162730	100	85.167	Poecilia_reticulata
ENSCVAG00000018571	zgc:162730	80	40.351	ENSPREG00000017495	sb:cb81	78	40.056	Poecilia_reticulata
ENSCVAG00000018571	zgc:162730	100	69.811	ENSPNYG00000015553	zgc:162730	100	69.104	Pundamilia_nyererei
ENSCVAG00000018571	zgc:162730	99	40.509	ENSPNAG00000030063	sb:cb81	97	37.931	Pygocentrus_nattereri
ENSCVAG00000018571	zgc:162730	100	45.714	ENSPNAG00000023018	zgc:162730	100	47.619	Pygocentrus_nattereri
ENSCVAG00000018571	zgc:162730	60	36.162	ENSSMAG00000018621	zgc:114130	92	33.484	Scophthalmus_maximus
ENSCVAG00000018571	zgc:162730	100	68.298	ENSSMAG00000018612	zgc:162730	100	68.998	Scophthalmus_maximus
ENSCVAG00000018571	zgc:162730	60	39.925	ENSSDUG00000002237	zgc:114130	60	41.288	Seriola_dumerili
ENSCVAG00000018571	zgc:162730	68	34.386	ENSSDUG00000001019	zfp36l1b	65	35.294	Seriola_dumerili
ENSCVAG00000018571	zgc:162730	100	71.065	ENSSDUG00000002247	zgc:162730	100	71.759	Seriola_dumerili
ENSCVAG00000018571	zgc:162730	80	39.779	ENSSDUG00000004426	sb:cb81	76	39.326	Seriola_dumerili
ENSCVAG00000018571	zgc:162730	90	37.653	ENSSLDG00000018035	sb:cb81	97	36.080	Seriola_lalandi_dorsalis
ENSCVAG00000018571	zgc:162730	100	70.602	ENSSLDG00000008502	zgc:162730	100	71.296	Seriola_lalandi_dorsalis
ENSCVAG00000018571	zgc:162730	60	39.700	ENSSLDG00000008496	zgc:114130	60	41.065	Seriola_lalandi_dorsalis
ENSCVAG00000018571	zgc:162730	100	74.648	ENSSPAG00000006851	zgc:162730	100	75.352	Stegastes_partitus
ENSCVAG00000018571	zgc:162730	100	67.062	ENSTRUG00000021229	zgc:162730	100	67.773	Takifugu_rubripes
ENSCVAG00000018571	zgc:162730	96	61.823	ENSTNIG00000000183	zgc:162730	100	64.286	Tetraodon_nigroviridis
ENSCVAG00000018571	zgc:162730	80	38.040	ENSTNIG00000019802	sb:cb81	93	38.968	Tetraodon_nigroviridis
ENSCVAG00000018571	zgc:162730	100	84.450	ENSXCOG00000012791	zgc:162730	100	84.928	Xiphophorus_couchianus
ENSCVAG00000018571	zgc:162730	61	35.271	ENSXCOG00000010688	sb:cb81	86	37.023	Xiphophorus_couchianus
ENSCVAG00000018571	zgc:162730	80	39.244	ENSXMAG00000004681	sb:cb81	77	39.943	Xiphophorus_maculatus
ENSCVAG00000018571	zgc:162730	100	84.450	ENSXMAG00000018206	zgc:162730	100	84.928	Xiphophorus_maculatus